RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 APOFQ13790 326 aa23.93■■□□□ 1.42
CHMP4B-201ENST00000217402 AADACL4Q5VUY2 407 aa23.93■■□□□ 1.42
CHMP4B-201ENST00000217402 ZSCAN2Q7Z7L9 614 aaPredicted RBP23.93■■□□□ 1.42
CHMP4B-201ENST00000217402 GLB1L2Q8IW92 636 aa23.93■■□□□ 1.42
CHMP4B-201ENST00000217402 FAM26EQ8N5C1 309 aa23.93■■□□□ 1.42
CHMP4B-201ENST00000217402 TMEM38BQ9NVV0 291 aa23.93■■□□□ 1.42
CHMP4B-201ENST00000217402 ELOVL5Q9NYP7 299 aa23.93■■□□□ 1.42
CHMP4B-201ENST00000217402 RAB26Q9ULW5 256 aa23.93■■□□□ 1.42
CHMP4B-201ENST00000217402 A0A096LPE4 126 aa23.92■■□□□ 1.42
CHMP4B-201ENST00000217402 A0A1W2PPZ6 126 aa23.92■■□□□ 1.42
CHMP4B-201ENST00000217402 MPZL2O60487 215 aa23.92■■□□□ 1.42
CHMP4B-201ENST00000217402 GABRB1P18505 474 aa23.92■■□□□ 1.42
CHMP4B-201ENST00000217402 SH3BGRP55822 239 aaPredicted RBP23.92■■□□□ 1.42
CHMP4B-201ENST00000217402 TGFBR3Q03167 851 aa23.92■■□□□ 1.42
CHMP4B-201ENST00000217402 GLO1Q04760 184 aa23.92■■□□□ 1.42
CHMP4B-201ENST00000217402 MAD2L1BPQ15013 274 aaPredicted RBP23.92■■□□□ 1.42
CHMP4B-201ENST00000217402 SFRP5Q5T4F7 317 aa23.92■■□□□ 1.42
CHMP4B-201ENST00000217402 NXNL2Q5VZ03 156 aa23.92■■□□□ 1.42
CHMP4B-201ENST00000217402 KLHL24Q6TFL4 600 aa23.92■■□□□ 1.42
CHMP4B-201ENST00000217402 LYPD4Q6UWN0 246 aa23.92■■□□□ 1.42
CHMP4B-201ENST00000217402 B3GLCTQ6Y288 498 aa23.92■■□□□ 1.42
CHMP4B-201ENST00000217402 ZNF813Q6ZN06 617 aa23.92■■□□□ 1.42
CHMP4B-201ENST00000217402 OR1K1Q8NGR3 316 aa23.92■■□□□ 1.42
CHMP4B-201ENST00000217402 RHOXF1Q8NHV9 184 aa23.92■■□□□ 1.42
CHMP4B-201ENST00000217402 H2AFY2Q9P0M6 372 aaPredicted RBP23.92■■□□□ 1.42
CHMP4B-201ENST00000217402 PRODHO43272 600 aa23.92■■□□□ 1.42
CHMP4B-201ENST00000217402 MPZL1O95297 269 aa23.92■■□□□ 1.42
CHMP4B-201ENST00000217402 HLA-DQA2P01906 255 aa23.92■■□□□ 1.42
CHMP4B-201ENST00000217402 SLC2A5P22732 501 aa23.92■■□□□ 1.42
CHMP4B-201ENST00000217402 IL32P24001 234 aa23.92■■□□□ 1.42
CHMP4B-201ENST00000217402 LAP3P28838 519 aa23.92■■□□□ 1.42
CHMP4B-201ENST00000217402 STK11Q15831 433 aa23.92■■□□□ 1.42
CHMP4B-201ENST00000217402 SGCAQ16586 387 aa23.92■■□□□ 1.42
CHMP4B-201ENST00000217402 BHLHA15Q7RTS1 189 aaPredicted RBP23.92■■□□□ 1.42
CHMP4B-201ENST00000217402 CNIH3Q8TBE1 160 aa23.92■■□□□ 1.42
CHMP4B-201ENST00000217402 ZNF582Q96NG8 517 aaPredicted RBP23.92■■□□□ 1.42
CHMP4B-201ENST00000217402 ENTPD6O75354 484 aa23.91■■□□□ 1.42
CHMP4B-201ENST00000217402 GUCA1AP43080 201 aaPredicted RBP23.91■■□□□ 1.42
CHMP4B-201ENST00000217402 ISL1P61371 349 aa23.91■■□□□ 1.42
CHMP4B-201ENST00000217402 FBXL19-AS1Q494R0 122 aa23.91■■□□□ 1.42
CHMP4B-201ENST00000217402 HIKESHIQ53FT3 197 aa23.91■■□□□ 1.42
CHMP4B-201ENST00000217402 APH1BQ8WW43 257 aa23.91■■□□□ 1.42
CHMP4B-201ENST00000217402 ZMYND19Q96E35 227 aaPredicted RBP23.91■■□□□ 1.42
CHMP4B-201ENST00000217402 ANKRD60Q9BZ19 345 aa23.91■■□□□ 1.42
CHMP4B-201ENST00000217402 TVP23AA6NH52 213 aa23.9■■□□□ 1.42
CHMP4B-201ENST00000217402 SCG5P05408 212 aa23.9■■□□□ 1.42
CHMP4B-201ENST00000217402 PSMB1P20618 241 aaKnown RBP23.9■■□□□ 1.42
CHMP4B-201ENST00000217402 GRNP28799 593 aaKnown RBP23.9■■□□□ 1.42
CHMP4B-201ENST00000217402 CCKARP32238 428 aa23.9■■□□□ 1.42
CHMP4B-201ENST00000217402 CDH11P55287 796 aa23.9■■□□□ 1.42
CHMP4B-201ENST00000217402 MRPS34P82930 218 aaKnown RBP23.9■■□□□ 1.42
CHMP4B-201ENST00000217402 GABRA6Q16445 453 aa23.9■■□□□ 1.42
CHMP4B-201ENST00000217402 MEP1BQ16820 701 aa23.9■■□□□ 1.42
CHMP4B-201ENST00000217402 LINC01590Q5TEZ4 76 aa23.9■■□□□ 1.42
CHMP4B-201ENST00000217402 ANKRD16Q6P6B7 361 aa23.9■■□□□ 1.42
CHMP4B-201ENST00000217402 GID4Q8IVV7 300 aa23.9■■□□□ 1.42
CHMP4B-201ENST00000217402 RNASE6Q93091 150 aaKnown RBP23.9■■□□□ 1.42
CHMP4B-201ENST00000217402 NABP1Q96AH0 204 aa23.9■■□□□ 1.42
CHMP4B-201ENST00000217402 LRRC46Q96FV0 321 aa23.9■■□□□ 1.42
CHMP4B-201ENST00000217402 CNBD2Q96M20 576 aa23.9■■□□□ 1.42
CHMP4B-201ENST00000217402 NELFAQ9H3P2 528 aa23.9■■□□□ 1.42
CHMP4B-201ENST00000217402 EMC7Q9NPA0 242 aa23.9■■□□□ 1.42
CHMP4B-201ENST00000217402 CCDC182A6NF36 153 aa23.89■■□□□ 1.42
CHMP4B-201ENST00000217402 GLCEO94923 617 aa23.89■■□□□ 1.42
CHMP4B-201ENST00000217402 GAAP10253 952 aa23.89■■□□□ 1.42
CHMP4B-201ENST00000217402 UGT2B10P36537 528 aa23.89■■□□□ 1.42
CHMP4B-201ENST00000217402 FOXL2NBQ6ZUU3 175 aa23.89■■□□□ 1.42
CHMP4B-201ENST00000217402 THAP5Q7Z6K1 395 aa23.89■■□□□ 1.42
CHMP4B-201ENST00000217402 SLC22A24Q8N4F4 322 aa23.89■■□□□ 1.42
CHMP4B-201ENST00000217402 ZNF511Q8NB15 262 aa23.89■■□□□ 1.42
CHMP4B-201ENST00000217402 SLC26A10Q8NG04 563 aa23.89■■□□□ 1.42
CHMP4B-201ENST00000217402 SH3GL3Q99963 347 aa23.89■■□□□ 1.42
CHMP4B-201ENST00000217402 POLE4Q9NR33 117 aa23.89■■□□□ 1.42
CHMP4B-201ENST00000217402 CLN6Q9NWW5 311 aa23.89■■□□□ 1.42
CHMP4B-201ENST00000217402 MOKQ9UQ07 419 aa23.89■■□□□ 1.42
CHMP4B-201ENST00000217402 HSPE1-MOB4S4R3N1 261 aa23.89■■□□□ 1.42
CHMP4B-201ENST00000217402 USP9XQ93008 2570 aaPredicted RBP23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 SH3D21A4FU49 640 aa23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 WIPF3A6NGB9 483 aa23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 C16orf97H3BN30 126 aa23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 TFF3Q07654 80 aa23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 OCLNQ16625 522 aa23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 MEDAGQ5VYS4 303 aa23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 UGT2A3Q6UWM9 527 aa23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 MEPCEQ7L2J0 689 aaKnown RBP23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 LRRC18Q8N456 261 aa23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 SSC4DQ8WTU2 575 aa23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 C11orf40Q8WZ69 217 aa23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 BCL2L2Q92843 193 aaPredicted RBP23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 S100PBPQ96BU1 408 aa23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 WBP4O75554 376 aaKnown RBP23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 TFP02787 698 aa23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 NPR2P20594 1047 aa23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 MSR1P21757 451 aa23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 MYF6P23409 242 aa23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 FMO3P31513 532 aa23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 NUDT6P53370 316 aa23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 HSF2Q03933 536 aa23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 TBRG1Q3YBR2 411 aa23.88■■□□□ 1.41
CHMP4B-201ENST00000217402 SLC35D3Q5M8T2 416 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms