RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 MPC1LP0DKB6 136 aa13.36□□□□□ -0.27
PTPRA-201ENST00000216877 MAKP20794 623 aa13.36□□□□□ -0.27
PTPRA-201ENST00000216877 TLX1P31314 330 aaPredicted RBP13.36□□□□□ -0.27
PTPRA-201ENST00000216877 CD96P40200 585 aa13.36□□□□□ -0.27
PTPRA-201ENST00000216877 C21orf58P58505 322 aa13.36□□□□□ -0.27
PTPRA-201ENST00000216877 ZNF345Q14585 488 aa13.36□□□□□ -0.27
PTPRA-201ENST00000216877 KHDC3LQ587J8 217 aa13.36□□□□□ -0.27
PTPRA-201ENST00000216877 PLEKHS1Q5SXH7 462 aa13.36□□□□□ -0.27
PTPRA-201ENST00000216877 ZNF343Q6P1L6 599 aa13.36□□□□□ -0.27
PTPRA-201ENST00000216877 FAM220AQ7Z4H9 259 aa13.36□□□□□ -0.27
PTPRA-201ENST00000216877 RNF113BQ8IZP6 322 aaKnown RBP13.36□□□□□ -0.27
PTPRA-201ENST00000216877 ZNF610Q8N9Z0 462 aa13.36□□□□□ -0.27
PTPRA-201ENST00000216877 ZCCHC10Q8TBK6 192 aa13.36□□□□□ -0.27
PTPRA-201ENST00000216877 CNN2Q99439 309 aaKnown RBP13.36□□□□□ -0.27
PTPRA-201ENST00000216877 DUSP22Q9NRW4 184 aa13.36□□□□□ -0.27
PTPRA-201ENST00000216877 MRPL22Q9NWU5 206 aaKnown RBP13.36□□□□□ -0.27
PTPRA-201ENST00000216877 CACFD1Q9UGQ2 172 aa13.36□□□□□ -0.27
PTPRA-201ENST00000216877 MMACHCQ9Y4U1 282 aa13.36□□□□□ -0.27
PTPRA-201ENST00000216877 NPIPB8E9PQR5 432 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 CYB5BO43169 146 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 FKTNO75072 461 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 ZFPL1O95159 310 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 KLKB1P03952 638 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 CTSLP07711 333 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 NPPBP16860 134 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 MDKP21741 143 aaPredicted RBP13.35□□□□□ -0.27
PTPRA-201ENST00000216877 PSMA3P25788 255 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 DHPSP49366 369 aaPredicted RBP13.35□□□□□ -0.27
PTPRA-201ENST00000216877 AP1S1P61966 158 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 PDE7AQ13946 482 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 RNASE10Q5GAN6 216 aaKnown RBP13.35□□□□□ -0.27
PTPRA-201ENST00000216877 VWA2Q5GFL6 755 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 LIPNQ5VXI9 398 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 RPL22L1Q6P5R6 122 aaKnown RBP13.35□□□□□ -0.27
PTPRA-201ENST00000216877 GPR148Q8TDV2 347 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 ASB16Q96NS5 453 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 G6PC3Q9BUM1 346 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 CST11Q9H112 138 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 RIMS4Q9H426 269 aaPredicted RBP13.35□□□□□ -0.27
PTPRA-201ENST00000216877 GLIPR2Q9H4G4 154 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 CREBZFQ9NS37 354 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 ZNF281Q9Y2X9 895 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 MSGN1A6NI15 193 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 PI3P19957 117 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 RPS27P42677 84 aaKnown RBP13.35□□□□□ -0.27
PTPRA-201ENST00000216877 TOMM20Q15388 145 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 NR0B2Q15466 257 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 GJD3Q8N144 294 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 HPSE2Q8WWQ2 592 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 DIO2Q92813 273 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 TOX2Q96NM4 488 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 TNFRSF13CQ96RJ3 184 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 NEU1Q99519 415 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 OR52A5Q9H2C5 316 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 M0QZQ0 153 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 PLPP1O14494 284 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 EREGO14944 169 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 ZNF354AO60765 605 aaPredicted RBP13.35□□□□□ -0.27
PTPRA-201ENST00000216877 ADAMTS4O75173 837 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 CD79AP11912 226 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 DVL1P1P54792 670 aaPredicted RBP13.35□□□□□ -0.27
PTPRA-201ENST00000216877 TAS2R19P59542 299 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 NHLH2Q02577 135 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 ZNHIT3Q15649 155 aaPredicted RBP13.35□□□□□ -0.27
PTPRA-201ENST00000216877 C17orf99Q6UX52 265 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 TM4SF18Q96CE8 201 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 ZDHHC5Q9C0B5 715 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 HCSTQ9UBK5 93 aa13.35□□□□□ -0.27
PTPRA-201ENST00000216877 FGF16O43320 207 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 OR1F1O43749 312 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 SCGB1D2O95969 90 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 IGSF6O95976 241 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 ERCC1P07992 297 aaPredicted RBP13.34□□□□□ -0.27
PTPRA-201ENST00000216877 SLC35G4P0C7Q5 338 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 ACTBP60709 375 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 ACTG1P63261 375 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.34□□□□□ -0.27
PTPRA-201ENST00000216877 C10orf53Q8N6V4 93 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 MR1Q95460 341 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 TMEM106AQ96A25 262 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 PRAP1Q96NZ9 151 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 GFI1Q99684 422 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 ZNF346Q9UL40 294 aaKnown RBP13.34□□□□□ -0.27
PTPRA-201ENST00000216877 TSC2P49815 1807 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 MFNGO00587 321 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 DOK2O60496 412 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 TBX6O95947 436 aaPredicted RBP13.34□□□□□ -0.27
PTPRA-201ENST00000216877 ADRB3P13945 408 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 CAMLGP49069 296 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 NUTF2P61970 127 aaKnown RBP13.34□□□□□ -0.27
PTPRA-201ENST00000216877 TNFRSF9Q07011 255 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 GGNBP1Q5YKI7 109 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 ZNF584Q8IVC4 421 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 OR1J1Q8NGS3 322 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 ADAD1Q96M93 576 aaKnown RBP13.34□□□□□ -0.27
PTPRA-201ENST00000216877 PACRGQ96M98 296 aaPredicted RBP13.34□□□□□ -0.27
PTPRA-201ENST00000216877 METTL9Q9H1A3 318 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 INPP5EQ9NRR6 644 aa13.34□□□□□ -0.27
PTPRA-201ENST00000216877 SIRT3Q9NTG7 399 aaPredicted RBP13.34□□□□□ -0.27
PTPRA-201ENST00000216877 B4GALT6Q9UBX8 382 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms