RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 ZNF638Q14966 1978 aaKnown RBP12.52□□□□□ -0.41
SIX4-201ENST00000216513 MAKP20794 623 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 PTGER4P35408 488 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 BSGP35613 385 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 GNB1P62873 340 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 YBX1P67809 324 aaKnown RBP12.51□□□□□ -0.41
SIX4-201ENST00000216513 FXNQ16595 210 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 TMEM108Q6UXF1 575 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 Q6ZSR9 355 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 OR1J1Q8NGS3 322 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 OR13C9Q8NGT0 318 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 WDR76Q9H967 626 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 HRASLSQ9HDD0 168 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 A4GALTQ9NPC4 353 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 RP2O75695 350 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 ARSBP15848 533 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 MYF6P23409 242 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 EMDP50402 254 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 ABHD11Q8NFV4 315 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 B3GNT3Q9Y2A9 372 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 TP53TG5Q9Y2B4 290 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 I6L893 689 aaPredicted RBP12.51□□□□□ -0.41
SIX4-201ENST00000216513 ARPC5O15511 151 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 SLC19A2O60779 497 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 SERPINE2P07093 398 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 POU3F3P20264 500 aaPredicted RBP12.51□□□□□ -0.41
SIX4-201ENST00000216513 SLC6A12P48065 614 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 CX3CR1P49238 355 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 BHLHA9Q7RTU4 235 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 OXGR1Q96P68 337 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 OR2A25A4D2G3 310 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 ZNF732B4DXR9 585 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 ARNTLO00327 626 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 HS3ST1O14792 307 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 GIPRP48546 466 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 CPNE5Q9HCH3 593 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 AGAP5A6NIR3 686 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 EML2O95834 649 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 RPL27P61353 136 aaKnown RBP12.51□□□□□ -0.41
SIX4-201ENST00000216513 MC2RQ01718 297 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 RIPPLY1Q0D2K3 151 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 ATP1A1-AS1Q5TC04 95 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 OR56B2PQ8NGI1 322 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 MAFIPQ8WZ33 124 aa12.51□□□□□ -0.41
SIX4-201ENST00000216513 METTL15A6NJ78 407 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 SHOXO15266 292 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 LILRB5O75023 590 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 DNAJB5O75953 348 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 DHRS4L1P0CG22 281 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 ACVR1Q04771 509 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 SPNS3Q6ZMD2 512 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 CYHR1Q6ZMK1 362 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 PRSS42Q7Z5A4 293 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 DMBX1Q8NFW5 382 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 KNTC1P50748 2209 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 C7orf72A4D263 438 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 BCAS1O75363 584 aaPredicted RBP12.5□□□□□ -0.41
SIX4-201ENST00000216513 IFNA2P01563 188 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 TGFBR1P36897 503 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 CLPPQ16740 277 aaPredicted RBP12.5□□□□□ -0.41
SIX4-201ENST00000216513 KRBOX4Q5JUW0 171 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 SAP25Q8TEE9 199 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 TUSC2O75896 110 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 SNAPC5O75971 98 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 HPRP00739 348 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 APOC3P02656 99 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 DEFA4P12838 97 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 GLRA1P23415 457 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 DNASE1P24855 282 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 CBLL1Q75N03 491 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 ZNF695Q8IW36 515 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 LINC01555Q8NAE3 123 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 OR6T1Q8NGN1 323 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 SLCO4A1Q96BD0 722 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 PIK3IP1Q96FE7 263 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 WNT1P04628 370 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 EMX1Q04741 257 aaPredicted RBP12.5□□□□□ -0.41
SIX4-201ENST00000216513 M1APQ8TC57 530 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 NRTNQ99748 197 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 CACNA1GO43497 2377 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 NRXN2Q9P2S2 1712 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 DAPP51397 102 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 CORO6Q6QEF8 472 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 D2HGDHQ8N465 521 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 ASB5Q8WWX0 329 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 ST8SIA4Q92187 359 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 DVL3Q92997 716 aaPredicted RBP12.5□□□□□ -0.41
SIX4-201ENST00000216513 RANBP3Q9H6Z4 567 aaPredicted RBP12.5□□□□□ -0.41
SIX4-201ENST00000216513 PRMT8Q9NR22 394 aaPredicted RBP12.5□□□□□ -0.41
SIX4-201ENST00000216513 SPAG17Q6Q759 2223 aa12.5□□□□□ -0.41
SIX4-201ENST00000216513 UPK1AO00322 258 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 ARPC1BO15143 372 aaKnown RBP12.49□□□□□ -0.41
SIX4-201ENST00000216513 GP1BAP07359 652 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 SBK2P0C263 348 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 CD34P28906 385 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 TMBIM6P55061 237 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 ZNF468Q5VIY5 522 aaPredicted RBP12.49□□□□□ -0.41
SIX4-201ENST00000216513 AADACL4Q5VUY2 407 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 CARFQ8N187 725 aa12.49□□□□□ -0.41
SIX4-201ENST00000216513 ZNF511Q8NB15 262 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms