RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 SHISA8B8ZZ34 492 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 PYCARD-AS1I3L0S3 204 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 ZNF354AO60765 605 aaPredicted RBP11.85□□□□□ -0.51
CTNS-201ENST00000046640 PTH2RP49190 550 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 SLC35D3Q5M8T2 416 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 METTL11BQ5VVY1 283 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 SLC29A4Q7RTT9 530 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 SLC16A9Q7RTY1 509 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 MDGA2Q7Z553 956 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 SDR16C5Q8N3Y7 309 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 TEX19Q8NA77 164 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 OR4D10Q8NGI6 311 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 METTL21AQ8WXB1 218 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 NSMAFQ92636 917 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 DAZLQ92904 295 aaKnown RBP11.85□□□□□ -0.51
CTNS-201ENST00000046640 PIPOXQ9P0Z9 390 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 MYEF2Q9P2K5 600 aaKnown RBP11.85□□□□□ -0.51
CTNS-201ENST00000046640 MRTO4Q9UKD2 239 aaKnown RBP11.85□□□□□ -0.51
CTNS-201ENST00000046640 FOXJ3Q9UPW0 622 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 MMACHCQ9Y4U1 282 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 UPK3AO75631 287 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 MAMSTRQ6ZN01 415 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 ZNF676Q8N7Q3 588 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 CADM4Q8NFZ8 388 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 LAT2Q9GZY6 243 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 TMEM138Q9NPI0 162 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 VDAC3Q9Y277 283 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 GABARAPH6UMI1 98 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 AIPO00170 330 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 XKRYO14609 159 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 SUSD5O60279 629 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 SLC16A7O60669 478 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 MPZL1O95297 269 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 TIAF1O95411 115 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 GP1BBP13224 206 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 HLA-DOBP13765 273 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 NFYAP23511 347 aaPredicted RBP11.85□□□□□ -0.51
CTNS-201ENST00000046640 FBXW4P57775 412 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 CBFBQ13951 182 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 SMAD2Q15796 467 aaKnown RBP11.85□□□□□ -0.51
CTNS-201ENST00000046640 TUSC1Q2TAM9 212 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 PCGF3Q3KNV8 242 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 PWWP2BQ6NUJ5 590 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 EXD3Q8N9H8 876 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 GPX7Q96SL4 187 aaPredicted RBP11.85□□□□□ -0.51
CTNS-201ENST00000046640 SDHAF2Q9NX18 166 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 AUP1Q9Y679 476 aa11.85□□□□□ -0.51
CTNS-201ENST00000046640 CELSR3Q9NYQ7 3312 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 TRAV8-7A0A075B6U6 113 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 GSTZ1O43708 216 aaPredicted RBP11.84□□□□□ -0.51
CTNS-201ENST00000046640 CREBL2O60519 120 aaPredicted RBP11.84□□□□□ -0.51
CTNS-201ENST00000046640 RENP00797 406 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 AFF3P51826 1226 aaKnown RBP11.84□□□□□ -0.51
CTNS-201ENST00000046640 SQSTM1Q13501 440 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 ACKR1Q16570 336 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 FAM69AQ5T7M9 428 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 SLC6A19Q695T7 634 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 C11orf88Q6PI97 169 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 GLDNQ6ZMI3 551 aaPredicted RBP11.84□□□□□ -0.51
CTNS-201ENST00000046640 STAC2Q6ZMT1 411 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 SLC43A2Q8N370 569 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 OR1N1Q8NGS0 311 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 CCDC74AQ96AQ1 378 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 C7orf50Q9BRJ6 194 aaKnown RBP11.84□□□□□ -0.51
CTNS-201ENST00000046640 AIFM2Q9BRQ8 373 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 ADAM19Q9H013 955 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 ARL6Q9H0F7 186 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 SLC22A11Q9NSA0 550 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 TMED7-TICAM2A0A0A6YYA0 188 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 A0A1B0GX78 115 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 ATP6V1G2-DDX39BF2Z307 99 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 GOSR2O14653 212 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 NUDT21O43809 227 aaKnown RBP11.84□□□□□ -0.51
CTNS-201ENST00000046640 TSPAN2O60636 221 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 SPARCP09486 303 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 GLB1P16278 677 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 ADRA2CP18825 462 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 ART1P52961 327 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 TAS2R20P59543 309 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 ALKBH1Q13686 389 aaKnown RBP11.84□□□□□ -0.51
CTNS-201ENST00000046640 ZNF684Q5T5D7 378 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 D2HGDHQ8N465 521 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 STT3BQ8TCJ2 826 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 LRFN5Q96NI6 719 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 PTTG3PQ9NZH4 202 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 SLC22A13Q9Y226 551 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 MRPS17Q9Y2R5 130 aaKnown RBP11.84□□□□□ -0.51
CTNS-201ENST00000046640 TMED7Q9Y3B3 224 aa11.84□□□□□ -0.51
CTNS-201ENST00000046640 ANXA2P2A6NMY6 339 aa11.83□□□□□ -0.52
CTNS-201ENST00000046640 SOX1O00570 391 aaPredicted RBP11.83□□□□□ -0.52
CTNS-201ENST00000046640 GDF9O60383 454 aa11.83□□□□□ -0.52
CTNS-201ENST00000046640 ANXA2P07355 339 aaKnown RBP11.83□□□□□ -0.52
CTNS-201ENST00000046640 TACSTD2P09758 323 aa11.83□□□□□ -0.52
CTNS-201ENST00000046640 GIMD1P0DJR0 217 aa11.83□□□□□ -0.52
CTNS-201ENST00000046640 VSIG10L2P0DP72 767 aa11.83□□□□□ -0.52
CTNS-201ENST00000046640 ZNF35P13682 527 aa11.83□□□□□ -0.52
CTNS-201ENST00000046640 ARHGDIBP52566 201 aa11.83□□□□□ -0.52
CTNS-201ENST00000046640 PTCRAQ6ISU1 281 aaPredicted RBP11.83□□□□□ -0.52
CTNS-201ENST00000046640 PRSS42Q7Z5A4 293 aa11.83□□□□□ -0.52
CTNS-201ENST00000046640 GLB1L2Q8IW92 636 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms