RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 HIF1ANQ9NWT6 349 aa13.55□□□□□ -0.24
ERCC1-201ENST00000013807 METRNQ9UJH8 293 aa13.55□□□□□ -0.24
ERCC1-201ENST00000013807 BBIP1A8MTZ0 92 aa13.54□□□□□ -0.24
ERCC1-201ENST00000013807 ADH4P08319 380 aa13.54□□□□□ -0.24
ERCC1-201ENST00000013807 NR2C1P13056 603 aa13.54□□□□□ -0.24
ERCC1-201ENST00000013807 ANPEPP15144 967 aa13.54□□□□□ -0.24
ERCC1-201ENST00000013807 KDELR2P33947 212 aa13.54□□□□□ -0.24
ERCC1-201ENST00000013807 SRP14P37108 136 aaKnown RBP13.54□□□□□ -0.24
ERCC1-201ENST00000013807 MYBPC1Q00872 1141 aa13.54□□□□□ -0.24
ERCC1-201ENST00000013807 TEKQ02763 1124 aa13.54□□□□□ -0.24
ERCC1-201ENST00000013807 NKPD1Q17RQ9 610 aa13.54□□□□□ -0.24
ERCC1-201ENST00000013807 SLC25A47Q6Q0C1 308 aa13.54□□□□□ -0.24
ERCC1-201ENST00000013807 MEX3DQ86XN8 651 aaKnown RBP13.54□□□□□ -0.24
ERCC1-201ENST00000013807 SYT14Q8NB59 555 aa13.54□□□□□ -0.24
ERCC1-201ENST00000013807 FNDC8Q8TC99 324 aa13.54□□□□□ -0.24
ERCC1-201ENST00000013807 C10orf82Q8WW14 230 aa13.54□□□□□ -0.24
ERCC1-201ENST00000013807 POM121L2Q96KW2 1035 aa13.54□□□□□ -0.24
ERCC1-201ENST00000013807 TSPAN32Q96QS1 320 aa13.54□□□□□ -0.24
ERCC1-201ENST00000013807 MED31Q9Y3C7 131 aa13.54□□□□□ -0.24
ERCC1-201ENST00000013807 DOCK11Q5JSL3 2073 aa13.54□□□□□ -0.24
ERCC1-201ENST00000013807 TRAV20A0A0B4J274 112 aa13.53□□□□□ -0.24
ERCC1-201ENST00000013807 GMNCA6NCL1 334 aa13.53□□□□□ -0.24
ERCC1-201ENST00000013807 MCIDASD6RGH6 385 aa13.53□□□□□ -0.24
ERCC1-201ENST00000013807 PPIHO43447 177 aaKnown RBP13.53□□□□□ -0.24
ERCC1-201ENST00000013807 IGHMP01871 453 aa13.53□□□□□ -0.24
ERCC1-201ENST00000013807 LCKP06239 509 aa13.53□□□□□ -0.24
ERCC1-201ENST00000013807 STOMP27105 288 aa13.53□□□□□ -0.24
ERCC1-201ENST00000013807 APLNRP35414 380 aa13.53□□□□□ -0.24
ERCC1-201ENST00000013807 ERVS71-1P61550 626 aa13.53□□□□□ -0.24
ERCC1-201ENST00000013807 SELENOWP63302 87 aa13.53□□□□□ -0.24
ERCC1-201ENST00000013807 CCL8P80075 99 aa13.53□□□□□ -0.24
ERCC1-201ENST00000013807 LAPTM4AQ15012 233 aa13.53□□□□□ -0.24
ERCC1-201ENST00000013807 ANKDD1AQ495B1 522 aa13.53□□□□□ -0.24
ERCC1-201ENST00000013807 PABPC1L2AQ5JQF8 200 aa13.53□□□□□ -0.24
ERCC1-201ENST00000013807 FAM209AQ5JX71 171 aa13.53□□□□□ -0.24
ERCC1-201ENST00000013807 THEM4Q5T1C6 240 aa13.53□□□□□ -0.24
ERCC1-201ENST00000013807 TMEM154Q6P9G4 183 aa13.53□□□□□ -0.24
ERCC1-201ENST00000013807 FOXL2NBQ6ZUU3 175 aa13.53□□□□□ -0.24
ERCC1-201ENST00000013807 LRRC18Q8N456 261 aa13.53□□□□□ -0.24
ERCC1-201ENST00000013807 OR51F2Q8NH61 342 aa13.53□□□□□ -0.24
ERCC1-201ENST00000013807 MOSPD2Q8NHP6 518 aa13.53□□□□□ -0.24
ERCC1-201ENST00000013807 SNX33Q8WV41 574 aa13.53□□□□□ -0.24
ERCC1-201ENST00000013807 HDAC2Q92769 488 aaKnown RBP13.53□□□□□ -0.24
ERCC1-201ENST00000013807 MARS2Q96GW9 593 aaKnown RBP13.53□□□□□ -0.24
ERCC1-201ENST00000013807 TMEM120AQ9BXJ8 343 aa13.53□□□□□ -0.24
ERCC1-201ENST00000013807 KCNN2Q9H2S1 579 aa13.53□□□□□ -0.24
ERCC1-201ENST00000013807 G6PC2Q9NQR9 355 aa13.53□□□□□ -0.24
ERCC1-201ENST00000013807 SAR1AQ9NR31 198 aa13.53□□□□□ -0.24
ERCC1-201ENST00000013807 TREM2Q9NZC2 230 aa13.53□□□□□ -0.24
ERCC1-201ENST00000013807 A4GNTQ9UNA3 340 aa13.53□□□□□ -0.24
ERCC1-201ENST00000013807 GRIP1Q9Y3R0 1128 aa13.53□□□□□ -0.24
ERCC1-201ENST00000013807 IGKV1D-43A0A0B4J1Z2 117 aa13.52□□□□□ -0.25
ERCC1-201ENST00000013807 H3BSA7 217 aa13.52□□□□□ -0.25
ERCC1-201ENST00000013807 DEAF1O75398 565 aaPredicted RBP13.52□□□□□ -0.25
ERCC1-201ENST00000013807 SLC2A10O95528 541 aa13.52□□□□□ -0.25
ERCC1-201ENST00000013807 H2AFXP16104 143 aaPredicted RBP13.52□□□□□ -0.25
ERCC1-201ENST00000013807 ITGA2P17301 1181 aa13.52□□□□□ -0.25
ERCC1-201ENST00000013807 TNFRSF1BP20333 461 aa13.52□□□□□ -0.25
ERCC1-201ENST00000013807 OR1E2P47887 323 aa13.52□□□□□ -0.25
ERCC1-201ENST00000013807 MMP15P51511 669 aa13.52□□□□□ -0.25
ERCC1-201ENST00000013807 ST3GAL3Q11203 375 aa13.52□□□□□ -0.25
ERCC1-201ENST00000013807 KLF10Q13118 480 aa13.52□□□□□ -0.25
ERCC1-201ENST00000013807 MBNL2Q5VZF2 373 aaKnown RBP13.52□□□□□ -0.25
ERCC1-201ENST00000013807 UNQ6126/PRO20091Q6UXV3 157 aa13.52□□□□□ -0.25
ERCC1-201ENST00000013807 TEX29Q8N6K0 151 aa13.52□□□□□ -0.25
ERCC1-201ENST00000013807 LRRC75AQ8NAA5 344 aa13.52□□□□□ -0.25
ERCC1-201ENST00000013807 FAM156AQ8NDB6 213 aa13.52□□□□□ -0.25
ERCC1-201ENST00000013807 ALG12Q9BV10 488 aa13.52□□□□□ -0.25
ERCC1-201ENST00000013807 KLHL21Q9UJP4 597 aa13.52□□□□□ -0.25
ERCC1-201ENST00000013807 LOC100509620A0A075B734 347 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 IGHV1-69-2A0A0G2JMI3 117 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 FAM220BPB1ANY3 271 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 MRASO14807 208 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 MT-ND5P03915 603 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 ZNF32P17041 273 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 CDAP32320 146 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 LIPAP38571 399 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 WNT5AP41221 380 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 RPL27P61353 136 aaKnown RBP13.51□□□□□ -0.25
ERCC1-201ENST00000013807 PSG4Q00888 419 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 HSF2Q03933 536 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 SCGB2A2Q13296 93 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 FHL1Q13642 323 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 MAPRE2Q15555 327 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 ZNF718Q3SXZ3 478 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 CYBRD1Q53TN4 286 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 ALG10Q5BKT4 473 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 FAM205BPQ63HN1 556 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 ACSM5Q6NUN0 579 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 RINLQ6ZS11 566 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 USP43Q70EL4 1123 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 SYT9Q86SS6 491 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 ZNF101Q8IZC7 436 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 PCYOX1LQ8NBM8 494 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 SEMA6DQ8NFY4 1073 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 OR1J1Q8NGS3 322 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 BPIFA2Q96DR5 249 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 PRRC1Q96M27 445 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 LRRC37BQ96QE4 947 aa13.51□□□□□ -0.25
ERCC1-201ENST00000013807 WACQ9BTA9 647 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms