RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 BARHL1Q9BZE3 327 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 ZFP64Q9NPA5 681 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 POLE4Q9NR33 117 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 EHFQ9NZC4 300 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 A0A0A6YYH2 397 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 IGHV3-15A0A0B4J1V0 119 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 SERTM1A2A2V5 107 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 A6NJ64 397 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 GAPDHSO14556 408 aaPredicted RBP9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 SCG5P05408 212 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 ADH6P28332 368 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 MRPL19P49406 292 aaKnown RBP9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 EDDM3BP56851 147 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 MTFR2Q6P444 385 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 MEX3BQ6ZN04 569 aaKnown RBP9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 RNF165Q6ZSG1 346 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 VN1R4Q7Z5H5 301 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 ANKRD13BQ86YJ7 626 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 C1orf87Q8N0U7 546 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 OR56B2PQ8NGI1 322 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 OR5M9Q8NGP3 310 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 SDHAF2Q9NX18 166 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 HSPB11Q9Y547 144 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 RGPD3A6NKT7 1758 aaPredicted RBP9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 PRSS37A4D1T9 235 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 TSPAN9O75954 239 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 IFNA1P01562 189 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 HIST1H1CP16403 213 aaKnown RBP9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 DNASE1P24855 282 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 PPP1CAP62136 330 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 RNPS1Q15287 305 aaKnown RBP9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 MSMO1Q15800 293 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 ZNF425Q6IV72 752 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 CCBE1Q6UXH8 406 aaPredicted RBP9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 BHLHE23Q8NDY6 225 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 NKX3-1Q99801 234 aaPredicted RBP9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 OR2S2Q9NQN1 319 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 LUZP4Q9P127 313 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 TRIP12Q14669 1992 aaPredicted RBP9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 A0A096LPE4 126 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 IGHV5-10-1A0A0J9YXX1 117 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 A0A1B0GTL3 188 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 A0A1W2PPZ6 126 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 MEIS3P1A6NDR6 274 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 SPINT1O43278 529 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 IFNA2P01563 188 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 EDN3P14138 238 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 BLVRBP30043 206 aaPredicted RBP9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 ARRB2P32121 409 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 ZNF81P51508 661 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 SLC14A1Q13336 389 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 TSC22D1Q15714 1073 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 LTC4SQ16873 150 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 OR10G3Q8NGC4 313 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 PIGTQ969N2 578 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 POLDIP2Q9Y2S7 368 aa9.42□□□□□ -0.9
NIPAL3-201ENST00000003912 C7orf72A4D263 438 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 C5orf49A4QMS7 147 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 SPINT2O43291 252 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 DHHO43323 396 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 XRCC2O43543 280 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 PRAF2O60831 178 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 ATP6V1G1O75348 118 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 CCL4P13236 92 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 SPI1P17947 270 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 PTGS2P35354 604 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 MTNR1BP49286 362 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 METTL11BQ5VVY1 283 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 SPNS2Q8IVW8 549 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 EMG1Q92979 244 aaKnown RBP9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 TMIGD2Q96BF3 282 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 SLC38A1Q9H2H9 487 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 LIN7BQ9HAP6 207 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 GALNT9Q9HCQ5 603 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 FAM60AQ9NP50 221 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 MED29Q9NX70 200 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 OSGIN1Q9UJX0 560 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 NUBP2Q9Y5Y2 271 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 ARFGEF1Q9Y6D6 1849 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 M0R135 149 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 HPGDSO60760 199 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 MT-CO2P00403 227 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 SBK2P0C263 348 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 SFTPCP11686 197 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 HLA-DMAP28067 261 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 RPS18P62269 152 aaKnown RBP9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 ZNF718Q3SXZ3 478 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 OR5AS1Q8N127 324 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 FAM71CQ8NEG0 241 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 OR6M1Q8NGM8 313 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 FNDC9Q8TBE3 224 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 ZNF799Q96GE5 643 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 SLC22A23A1A5C7 686 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 SC5DO75845 299 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 SLC2A1P11166 492 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 RPS25P62851 125 aaKnown RBP9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 UBE2IP63279 158 aaKnown RBP9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 RELAQ04206 551 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 KCNJ8Q15842 424 aa9.41□□□□□ -0.9
NIPAL3-201ENST00000003912 METAP1DQ6UB28 335 aaPredicted RBP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms