RNA–Protein interactions for RNA: ENST00000003302.8

USP28-201, Transcript of ubiquitin specific peptidase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP28, Length 4,669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-201ENST00000003302 OR1J2Q8NGS2 313 aa9.63□□□□□ -0.87
USP28-201ENST00000003302 ARL5BQ96KC2 179 aa9.63□□□□□ -0.87
USP28-201ENST00000003302 OR2A7Q96R45 310 aa9.63□□□□□ -0.87
USP28-201ENST00000003302 CLEC4MQ9H2X3 399 aaPredicted RBP9.63□□□□□ -0.87
USP28-201ENST00000003302 Q9N2J8 555 aa9.63□□□□□ -0.87
USP28-201ENST00000003302 FARSAQ9Y285 508 aaKnown RBP9.63□□□□□ -0.87
USP28-201ENST00000003302 ANXA2P07355 339 aaKnown RBP9.62□□□□□ -0.87
USP28-201ENST00000003302 THEGLP0DJG4 465 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 GTF2F2P13984 249 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 IFNGR1P15260 489 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 RBM34P42696 430 aaKnown RBP9.62□□□□□ -0.87
USP28-201ENST00000003302 PTCRAQ6ISU1 281 aaPredicted RBP9.62□□□□□ -0.87
USP28-201ENST00000003302 MCHR2Q969V1 340 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 NCOR1O75376 2440 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 KALRNO60229 2985 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 COL4A2P08572 1712 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 A0A1W2PP11 408 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 URADA6NGE7 173 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 EIF1AYO14602 144 aaKnown RBP9.62□□□□□ -0.87
USP28-201ENST00000003302 SLC16A7O60669 478 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 PPM1BO75688 479 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 PITPNAQ00169 270 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 GLYATL3Q5SZD4 288 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 C1orf189Q5VU69 101 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 TTLL10Q6ZVT0 673 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 PRSS42Q7Z5A4 293 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 SPERTQ8NA61 448 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 SLC26A10Q8NG04 563 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 TOE1Q96GM8 510 aaKnown RBP9.62□□□□□ -0.87
USP28-201ENST00000003302 LCORQ96JN0 433 aaPredicted RBP9.62□□□□□ -0.87
USP28-201ENST00000003302 C4orf45Q96LM5 186 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 DGAT2Q96PD7 388 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 MGAQ8IWI9 3026 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 UTS2O95399 124 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 NUDT14O95848 222 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 F12P00748 615 aaPredicted RBP9.62□□□□□ -0.87
USP28-201ENST00000003302 SPARCP09486 303 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 NUDT1P36639 197 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 EIF1AXP47813 144 aaKnown RBP9.62□□□□□ -0.87
USP28-201ENST00000003302 FUT7Q11130 342 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 TMEM184AQ6ZMB5 413 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 NUDT18Q6ZVK8 323 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 RHOUQ7L0Q8 258 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 JAZF1Q86VZ6 243 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 CLEC1AQ8NC01 280 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 OR4D6Q8NGJ1 314 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 EMC6Q9BV81 110 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 POFUT1Q9H488 388 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 FN3KRPQ9HA64 309 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 AHCTF1Q8WYP5 2266 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 FAM74A7A6NL05 159 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 H3BUI4 141 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 H7C417 338 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 CREBL2O60519 120 aaPredicted RBP9.62□□□□□ -0.87
USP28-201ENST00000003302 ANGPT1Q15389 498 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 ACKR1Q16570 336 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 FAM74A3Q4VXF1 159 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 SLC16A9Q7RTY1 509 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 C9orf40Q8IXQ3 194 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 ACBD4Q8NC06 268 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 OR2AK2Q8NG84 335 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 TMEM138Q9NPI0 162 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 MED29Q9NX70 200 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 MTFP1Q9UDX5 166 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 MAB21L2Q9Y586 359 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 RELNP78509 3460 aa9.62□□□□□ -0.87
USP28-201ENST00000003302 PI4KAP42356 2102 aa9.61□□□□□ -0.87
USP28-201ENST00000003302 FAM221BA6H8Z2 402 aa9.61□□□□□ -0.87
USP28-201ENST00000003302 MPTX1A8MV57 137 aa9.61□□□□□ -0.87
USP28-201ENST00000003302 GDF9O60383 454 aa9.61□□□□□ -0.87
USP28-201ENST00000003302 SERPINA3P01011 423 aa9.61□□□□□ -0.87
USP28-201ENST00000003302 SEC61A1P61619 476 aaKnown RBP9.61□□□□□ -0.87
USP28-201ENST00000003302 POU4F2Q12837 409 aa9.61□□□□□ -0.87
USP28-201ENST00000003302 TRAM1Q15629 374 aa9.61□□□□□ -0.87
USP28-201ENST00000003302 TMUB2Q71RG4 321 aa9.61□□□□□ -0.87
USP28-201ENST00000003302 OR52H1Q8NGJ2 320 aa9.61□□□□□ -0.87
USP28-201ENST00000003302 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.61□□□□□ -0.87
USP28-201ENST00000003302 GRHPRQ9UBQ7 328 aa9.61□□□□□ -0.87
USP28-201ENST00000003302 TRBV5-7A0A0A0MS05 114 aa9.61□□□□□ -0.87
USP28-201ENST00000003302 ADAM10O14672 748 aa9.61□□□□□ -0.87
USP28-201ENST00000003302 PPP3CBP16298 524 aa9.61□□□□□ -0.87
USP28-201ENST00000003302 CD1CP29017 333 aa9.61□□□□□ -0.87
USP28-201ENST00000003302 GABRA4P48169 554 aa9.61□□□□□ -0.87
USP28-201ENST00000003302 PRSS12P56730 875 aa9.61□□□□□ -0.87
USP28-201ENST00000003302 CFHR1Q03591 330 aa9.61□□□□□ -0.87
USP28-201ENST00000003302 ZNHIT3Q15649 155 aaPredicted RBP9.61□□□□□ -0.87
USP28-201ENST00000003302 DEFB133Q30KQ1 61 aa9.61□□□□□ -0.87
USP28-201ENST00000003302 METTL11BQ5VVY1 283 aa9.61□□□□□ -0.87
USP28-201ENST00000003302 SAMD14Q8IZD0 417 aaPredicted RBP9.61□□□□□ -0.87
USP28-201ENST00000003302 FAM71CQ8NEG0 241 aa9.61□□□□□ -0.87
USP28-201ENST00000003302 ZNF563Q8TA94 476 aa9.61□□□□□ -0.87
USP28-201ENST00000003302 TSEN15Q8WW01 171 aaKnown RBP9.61□□□□□ -0.87
USP28-201ENST00000003302 PTGES2Q9H7Z7 377 aa9.61□□□□□ -0.87
USP28-201ENST00000003302 LANCL2Q9NS86 450 aa9.61□□□□□ -0.87
USP28-201ENST00000003302 KLK13Q9UKR3 277 aa9.61□□□□□ -0.87
USP28-201ENST00000003302 hCG_1807616A0A1W2PRN6 198 aa9.61□□□□□ -0.87
USP28-201ENST00000003302 SEMA4FO95754 770 aa9.61□□□□□ -0.87
USP28-201ENST00000003302 GABRA1P14867 456 aa9.61□□□□□ -0.87
USP28-201ENST00000003302 AVPR2P30518 371 aa9.61□□□□□ -0.87
USP28-201ENST00000003302 IL10RAQ13651 578 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms