RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 ZNF775Q96BV0 537 aaPredicted RBP8.31□□□□□ -1.08
PHGDH-228ENST00000641847 TXNDC15Q96J42 360 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 MUS81Q96NY9 551 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 ZNF385AQ96PM9 386 aaKnown RBP8.31□□□□□ -1.08
PHGDH-228ENST00000641847 EMC6Q9BV81 110 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 RNF122Q9H9V4 155 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 CMC2Q9NRP2 79 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 ZNF226Q9NYT6 803 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 EMC3Q9P0I2 261 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 GPR52Q9Y2T5 361 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 FAM215AQ9Y5M1 114 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 FLVCR1Q9Y5Y0 555 aa8.31□□□□□ -1.08
PHGDH-228ENST00000641847 ZNF726A6NNF4 738 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 ZNF724A8MTY0 619 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 GPR171O14626 319 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 DENRO43583 198 aaKnown RBP8.3□□□□□ -1.08
PHGDH-228ENST00000641847 SS18L1O75177 396 aaPredicted RBP8.3□□□□□ -1.08
PHGDH-228ENST00000641847 IGHG1P01857 330 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 ACADSP16219 412 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 AGTR1P30556 359 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 RUNX1T1Q06455 604 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 CAMK2DQ13557 499 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 MAD2L1BPQ15013 274 aaPredicted RBP8.3□□□□□ -1.08
PHGDH-228ENST00000641847 CARD17Q5XLA6 110 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 GTF2IRD2BQ6EKJ0 949 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 RTL6Q6ICC9 239 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 NIPAL3Q6P499 406 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 NHLRC1Q6VVB1 395 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 THAP5Q7Z6K1 395 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 GTF2IRD2Q86UP8 949 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 WDFY1Q8IWB7 410 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 TUSC5Q8IXB3 177 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 RPRMLQ8N4K4 120 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 TCEANCQ8N8B7 351 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 SLC37A3Q8NCC5 494 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 OR6X1Q8NH79 312 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 TMEM163Q8TC26 289 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 APH1BQ8WW43 257 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 HDAC2Q92769 488 aaKnown RBP8.3□□□□□ -1.08
PHGDH-228ENST00000641847 ZNF566Q969W8 418 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 TMEM45BQ96B21 275 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 OTULINQ96BN8 352 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 MS4A3Q96HJ5 214 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 GMPPAQ96IJ6 420 aaPredicted RBP8.3□□□□□ -1.08
PHGDH-228ENST00000641847 ADAD1Q96M93 576 aaKnown RBP8.3□□□□□ -1.08
PHGDH-228ENST00000641847 OR2M2Q96R28 347 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 IL4I1Q96RQ9 567 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 NMNAT3Q96T66 252 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 TM9SF2Q99805 663 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 TTYH2Q9BSA4 534 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 FN3KQ9H479 309 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 CALHM2Q9HA72 323 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 BCO1Q9HAY6 547 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 GP6Q9HCN6 339 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 AASSQ9UDR5 926 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 FOXD3Q9UJU5 478 aaPredicted RBP8.3□□□□□ -1.08
PHGDH-228ENST00000641847 RCE1Q9Y256 329 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 NOSIPQ9Y314 301 aaKnown RBP8.3□□□□□ -1.08
PHGDH-228ENST00000641847 HSPE1-MOB4S4R3N1 261 aa8.3□□□□□ -1.08
PHGDH-228ENST00000641847 A0A0G2JNJ9 132 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 SLC35F4A4IF30 521 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 MBD3L4A6NDZ8 208 aaPredicted RBP8.29□□□□□ -1.08
PHGDH-228ENST00000641847 MBD3L3A6NE82 208 aaPredicted RBP8.29□□□□□ -1.08
PHGDH-228ENST00000641847 TUBAL3A6NHL2 446 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 MBD3L5A6NJ08 208 aaPredicted RBP8.29□□□□□ -1.08
PHGDH-228ENST00000641847 FAM183AA6NL82 134 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 PRR23D1E9PI22 279 aaPredicted RBP8.29□□□□□ -1.08
PHGDH-228ENST00000641847 HAX1O00165 279 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 DVL2O14641 736 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 TLX2O43763 284 aaPredicted RBP8.29□□□□□ -1.08
PHGDH-228ENST00000641847 MPZL2O60487 215 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 SMPD2O60906 423 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 SLC43A1O75387 559 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 TRMUO75648 421 aaKnown RBP8.29□□□□□ -1.08
PHGDH-228ENST00000641847 RENP00797 406 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 YES1P07947 543 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 PGA4P0DJD7 388 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 PGA3P0DJD8 388 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 PRR23D2P0DMB1 279 aaPredicted RBP8.29□□□□□ -1.08
PHGDH-228ENST00000641847 GLI4P10075 376 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 EPXP11678 715 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 GABRB1P18505 474 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 PAICSP22234 425 aaKnown RBP8.29□□□□□ -1.08
PHGDH-228ENST00000641847 CDKN2AP42771 156 aaKnown RBP8.29□□□□□ -1.08
PHGDH-228ENST00000641847 CSNK1A1P48729 337 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 SELENOPP49908 381 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 CLRN1P58418 232 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 ISL1P61371 349 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 SNRPGP62308 76 aaKnown RBP8.29□□□□□ -1.08
PHGDH-228ENST00000641847 SIRPAP78324 504 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 CD47Q08722 323 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 ITGADQ13349 1161 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 MED21Q13503 144 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 SNTB1Q13884 538 aaKnown RBP8.29□□□□□ -1.08
PHGDH-228ENST00000641847 TMEM201Q5SNT2 666 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 OR2A2Q6IF42 318 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 KRT80Q6KB66 452 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 PLBD1Q6P4A8 553 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 SEM1Q6ZVN7 128 aa8.29□□□□□ -1.08
PHGDH-228ENST00000641847 AAED1Q7RTV5 226 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms