RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 GLSO94925 669 aaPredicted RBP13.22□□□□□ -0.29
SCARB2-221ENST00000640341 ADAM8P78325 824 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 SPOCK1Q08629 439 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 C2orf76Q3KRA6 126 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 SDR16C5Q8N3Y7 309 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 CMKLR1Q99788 373 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 SDHAF2Q9NX18 166 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 STEAP1Q9UHE8 339 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 HIF3AQ9Y2N7 669 aa13.22□□□□□ -0.29
SCARB2-221ENST00000640341 FAM25EA8MYX2 175 aa13.21□□□□□ -0.29
SCARB2-221ENST00000640341 FREM3P0C091 2139 aa13.21□□□□□ -0.29
SCARB2-221ENST00000640341 PNMTP11086 282 aa13.21□□□□□ -0.29
SCARB2-221ENST00000640341 APEHP13798 732 aaKnown RBP13.21□□□□□ -0.29
SCARB2-221ENST00000640341 CD1CP29017 333 aa13.21□□□□□ -0.29
SCARB2-221ENST00000640341 IL12BP29460 328 aa13.21□□□□□ -0.29
SCARB2-221ENST00000640341 PTGS2P35354 604 aa13.21□□□□□ -0.29
SCARB2-221ENST00000640341 RABIFP47224 123 aa13.21□□□□□ -0.29
SCARB2-221ENST00000640341 RPS4XP62701 263 aaKnown RBP13.21□□□□□ -0.29
SCARB2-221ENST00000640341 RBMS2Q15434 407 aaKnown RBP13.21□□□□□ -0.29
SCARB2-221ENST00000640341 KLHL26Q53HC5 615 aa13.21□□□□□ -0.29
SCARB2-221ENST00000640341 MANEAQ5SRI9 462 aa13.21□□□□□ -0.29
SCARB2-221ENST00000640341 ZNF626Q68DY1 528 aa13.21□□□□□ -0.29
SCARB2-221ENST00000640341 LIN54Q6MZP7 749 aa13.21□□□□□ -0.29
SCARB2-221ENST00000640341 LRRTM1Q86UE6 522 aa13.21□□□□□ -0.29
SCARB2-221ENST00000640341 BPHLQ86WA6 291 aaPredicted RBP13.21□□□□□ -0.29
SCARB2-221ENST00000640341 ZNF595Q8IYB9 648 aa13.21□□□□□ -0.29
SCARB2-221ENST00000640341 PMM1Q92871 262 aa13.21□□□□□ -0.29
SCARB2-221ENST00000640341 PTDSS2Q9BVG9 487 aa13.21□□□□□ -0.29
SCARB2-221ENST00000640341 MOKQ9UQ07 419 aa13.21□□□□□ -0.29
SCARB2-221ENST00000640341 GGT3PA6NGU5 568 aa13.21□□□□□ -0.3
SCARB2-221ENST00000640341 MCRIP1C9JLW8 97 aa13.21□□□□□ -0.3
SCARB2-221ENST00000640341 SUSD5O60279 629 aa13.21□□□□□ -0.3
SCARB2-221ENST00000640341 RP2O75695 350 aa13.21□□□□□ -0.3
SCARB2-221ENST00000640341 CALCBP10092 127 aa13.21□□□□□ -0.3
SCARB2-221ENST00000640341 ALOX5APP20292 161 aa13.21□□□□□ -0.3
SCARB2-221ENST00000640341 SKP1P63208 163 aa13.21□□□□□ -0.3
SCARB2-221ENST00000640341 FZD2Q14332 565 aa13.21□□□□□ -0.3
SCARB2-221ENST00000640341 C1orf189Q5VU69 101 aa13.21□□□□□ -0.3
SCARB2-221ENST00000640341 C16orf47Q6ZP98 133 aaPredicted RBP13.21□□□□□ -0.3
SCARB2-221ENST00000640341 TMEM151BQ8IW70 566 aa13.21□□□□□ -0.3
SCARB2-221ENST00000640341 LMX1AQ8TE12 382 aa13.21□□□□□ -0.3
SCARB2-221ENST00000640341 FAM3DQ96BQ1 224 aa13.21□□□□□ -0.3
SCARB2-221ENST00000640341 FBXO4Q9UKT5 387 aa13.21□□□□□ -0.3
SCARB2-221ENST00000640341 FITM1A5D6W6 292 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 CTAG2O75638 210 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 PNPP00491 289 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 PRSS3P35030 304 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 RAP2BP61225 183 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 YPEL5P62699 121 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 GLYATL3Q5SZD4 288 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 HLA-DQA1Q5Y7H0 255 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 ZNF417Q8TAU3 575 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 FAM46BQ96A09 425 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 TBL1XR1Q9BZK7 514 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 CD207Q9UJ71 328 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 NUP50Q9UKX7 468 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 B9D1Q9UPM9 204 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 IGHV5-51A0A0C4DH38 117 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 PLSCR5A0PG75 271 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 WNT11O96014 354 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 IGHV4-34P06331 123 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 SEC61A1P61619 476 aaKnown RBP13.2□□□□□ -0.3
SCARB2-221ENST00000640341 SKP2Q13309 424 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 VWA2Q5GFL6 755 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 CD163Q86VB7 1156 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 CDC20BQ86Y33 519 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 LINC00346Q8IVM7 164 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 ZNF615Q8N8J6 731 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 SEC22AQ96IW7 307 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 CENPMQ9NSP4 180 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 PRODH2Q9UF12 536 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 F5H5P2 479 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 PRAMEF26H0Y7S4 382 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 CCSO14618 274 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 GIPP09681 153 aaPredicted RBP13.2□□□□□ -0.3
SCARB2-221ENST00000640341 C4BPBP20851 252 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 S100A11P31949 105 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 KIR3DL2P43630 455 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 ZNF117Q03924 483 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 DEFB133Q30KQ1 61 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 DMRTC1Q5HYR2 192 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 FAM74A1Q5RGS3 127 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 ZNF684Q5T5D7 378 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 FAM71CQ8NEG0 241 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 GPR119Q8TDV5 335 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 PHYHIPQ92561 330 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 PLEKHA1Q9HB21 404 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 ZC4H2Q9NQZ6 224 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 FBXL3Q9UKT7 428 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 CLDN16Q9Y5I7 305 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 TICRRQ7Z2Z1 1910 aa13.2□□□□□ -0.3
SCARB2-221ENST00000640341 SPTY2D1-AS1A0A0U1RR47 76 aa13.19□□□□□ -0.3
SCARB2-221ENST00000640341 SOX1O00570 391 aaPredicted RBP13.19□□□□□ -0.3
SCARB2-221ENST00000640341 XRCC3O43542 346 aa13.19□□□□□ -0.3
SCARB2-221ENST00000640341 OPN1LWP04000 364 aa13.19□□□□□ -0.3
SCARB2-221ENST00000640341 HOXC4P09017 264 aaPredicted RBP13.19□□□□□ -0.3
SCARB2-221ENST00000640341 ZNF28P17035 718 aa13.19□□□□□ -0.3
SCARB2-221ENST00000640341 DLX5P56178 289 aa13.19□□□□□ -0.3
SCARB2-221ENST00000640341 HLXQ14774 488 aaPredicted RBP13.19□□□□□ -0.3
SCARB2-221ENST00000640341 RAB11BQ15907 218 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms