RNA–Protein interactions for RNA: ENST00000638142.2

SYNGAP1-227, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 2,499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-227ENST00000638142 OTOSQ8NHW6 89 aa18.21■□□□□ 0.51
SYNGAP1-227ENST00000638142 COQ8AQ8NI60 647 aa18.21■□□□□ 0.51
SYNGAP1-227ENST00000638142 TSEN15Q8WW01 171 aaKnown RBP18.21■□□□□ 0.51
SYNGAP1-227ENST00000638142 ULBP3Q9BZM4 244 aa18.21■□□□□ 0.51
SYNGAP1-227ENST00000638142 SYT4Q9H2B2 425 aa18.21■□□□□ 0.51
SYNGAP1-227ENST00000638142 ZC4H2Q9NQZ6 224 aa18.21■□□□□ 0.51
SYNGAP1-227ENST00000638142 FXYD6-FXYD2A0A087WZ82 144 aa18.21■□□□□ 0.5
SYNGAP1-227ENST00000638142 TTLL8A6PVC2 850 aa18.21■□□□□ 0.5
SYNGAP1-227ENST00000638142 GOSR2O14653 212 aa18.21■□□□□ 0.5
SYNGAP1-227ENST00000638142 IL33O95760 270 aa18.21■□□□□ 0.5
SYNGAP1-227ENST00000638142 PRSS3P35030 304 aa18.21■□□□□ 0.5
SYNGAP1-227ENST00000638142 RAB11BQ15907 218 aa18.21■□□□□ 0.5
SYNGAP1-227ENST00000638142 WDR38Q5JTN6 314 aa18.21■□□□□ 0.5
SYNGAP1-227ENST00000638142 NKAIN2Q5VXU1 208 aa18.21■□□□□ 0.5
SYNGAP1-227ENST00000638142 ALKAL2Q6UX46 152 aa18.21■□□□□ 0.5
SYNGAP1-227ENST00000638142 TMEM184AQ6ZMB5 413 aa18.21■□□□□ 0.5
SYNGAP1-227ENST00000638142 OR51S1Q8NGJ8 323 aa18.21■□□□□ 0.5
SYNGAP1-227ENST00000638142 TNFAIP8L1Q8WVP5 186 aa18.21■□□□□ 0.5
SYNGAP1-227ENST00000638142 FXYD6Q9H0Q3 95 aa18.21■□□□□ 0.5
SYNGAP1-227ENST00000638142 LDAHQ9H6V9 325 aa18.21■□□□□ 0.5
SYNGAP1-227ENST00000638142 APMAPQ9HDC9 416 aa18.21■□□□□ 0.5
SYNGAP1-227ENST00000638142 TRAV18A0A075B6X5 111 aa18.2■□□□□ 0.5
SYNGAP1-227ENST00000638142 LOC100289279A0A1B0GTE1 492 aa18.2■□□□□ 0.5
SYNGAP1-227ENST00000638142 SLC17A2O00624 439 aa18.2■□□□□ 0.5
SYNGAP1-227ENST00000638142 RPS27P42677 84 aaKnown RBP18.2■□□□□ 0.5
SYNGAP1-227ENST00000638142 SERTAD2Q14140 314 aa18.2■□□□□ 0.5
SYNGAP1-227ENST00000638142 GK2Q14410 553 aaPredicted RBP18.2■□□□□ 0.5
SYNGAP1-227ENST00000638142 TOMM20Q15388 145 aa18.2■□□□□ 0.5
SYNGAP1-227ENST00000638142 ODF4Q2M2E3 257 aa18.2■□□□□ 0.5
SYNGAP1-227ENST00000638142 COL13A1Q5TAT6 717 aaPredicted RBP18.2■□□□□ 0.5
SYNGAP1-227ENST00000638142 TSSK4Q6SA08 328 aa18.2■□□□□ 0.5
SYNGAP1-227ENST00000638142 GSG1LQ6UXU4 331 aa18.2■□□□□ 0.5
SYNGAP1-227ENST00000638142 HSD17B13Q7Z5P4 300 aaPredicted RBP18.2■□□□□ 0.5
SYNGAP1-227ENST00000638142 ALX4Q9H161 411 aaPredicted RBP18.2■□□□□ 0.5
SYNGAP1-227ENST00000638142 TTYH1Q9H313 450 aaPredicted RBP18.2■□□□□ 0.5
SYNGAP1-227ENST00000638142 ITGA5P08648 1049 aa18.2■□□□□ 0.5
SYNGAP1-227ENST00000638142 TACR3P29371 465 aa18.2■□□□□ 0.5
SYNGAP1-227ENST00000638142 OC90Q02509 493 aaPredicted RBP18.2■□□□□ 0.5
SYNGAP1-227ENST00000638142 GUCA2AQ02747 115 aa18.2■□□□□ 0.5
SYNGAP1-227ENST00000638142 ZNF542PQ5EBM4 170 aa18.2■□□□□ 0.5
SYNGAP1-227ENST00000638142 BVESQ8NE79 360 aa18.2■□□□□ 0.5
SYNGAP1-227ENST00000638142 ZNF563Q8TA94 476 aa18.2■□□□□ 0.5
SYNGAP1-227ENST00000638142 FAM3DQ96BQ1 224 aa18.2■□□□□ 0.5
SYNGAP1-227ENST00000638142 AQP8O94778 261 aa18.19■□□□□ 0.5
SYNGAP1-227ENST00000638142 UTS2O95399 124 aa18.19■□□□□ 0.5
SYNGAP1-227ENST00000638142 YOD1Q5VVQ6 348 aaPredicted RBP18.19■□□□□ 0.5
SYNGAP1-227ENST00000638142 OR7E24Q6IFN5 339 aa18.19■□□□□ 0.5
SYNGAP1-227ENST00000638142 EIF4E3Q8N5X7 224 aaKnown RBP18.19■□□□□ 0.5
SYNGAP1-227ENST00000638142 CLEC1AQ8NC01 280 aa18.19■□□□□ 0.5
SYNGAP1-227ENST00000638142 TAAR8Q969N4 342 aa18.19■□□□□ 0.5
SYNGAP1-227ENST00000638142 OR8B4Q96RC9 309 aa18.19■□□□□ 0.5
SYNGAP1-227ENST00000638142 AMELYQ99218 206 aa18.19■□□□□ 0.5
SYNGAP1-227ENST00000638142 TMEM138Q9NPI0 162 aa18.19■□□□□ 0.5
SYNGAP1-227ENST00000638142 KCNG2Q9UJ96 466 aa18.19■□□□□ 0.5
SYNGAP1-227ENST00000638142 GMEB2Q9UKD1 530 aa18.19■□□□□ 0.5
SYNGAP1-227ENST00000638142 SPTBP11277 2137 aa18.19■□□□□ 0.5
SYNGAP1-227ENST00000638142 KDM4BO94953 1096 aa18.18■□□□□ 0.5
SYNGAP1-227ENST00000638142 MELTFP08582 738 aa18.18■□□□□ 0.5
SYNGAP1-227ENST00000638142 CCKBRP32239 447 aa18.18■□□□□ 0.5
SYNGAP1-227ENST00000638142 ACTBP60709 375 aa18.18■□□□□ 0.5
SYNGAP1-227ENST00000638142 ACTG1P63261 375 aa18.18■□□□□ 0.5
SYNGAP1-227ENST00000638142 EIF2B5Q13144 721 aaKnown RBP18.18■□□□□ 0.5
SYNGAP1-227ENST00000638142 C2orf76Q3KRA6 126 aa18.18■□□□□ 0.5
SYNGAP1-227ENST00000638142 PM20D2Q8IYS1 436 aa18.18■□□□□ 0.5
SYNGAP1-227ENST00000638142 ASB17Q8WXJ9 295 aa18.18■□□□□ 0.5
SYNGAP1-227ENST00000638142 ADAM19Q9H013 955 aa18.18■□□□□ 0.5
SYNGAP1-227ENST00000638142 ELOVL3Q9HB03 270 aa18.18■□□□□ 0.5
SYNGAP1-227ENST00000638142 PRAMEF26H0Y7S4 382 aa18.18■□□□□ 0.5
SYNGAP1-227ENST00000638142 H3BSH0 61 aa18.18■□□□□ 0.5
SYNGAP1-227ENST00000638142 PRKNO60260 465 aaPredicted RBP18.18■□□□□ 0.5
SYNGAP1-227ENST00000638142 WNT11O96014 354 aa18.18■□□□□ 0.5
SYNGAP1-227ENST00000638142 PPICP45877 212 aa18.18■□□□□ 0.5
SYNGAP1-227ENST00000638142 DCAF12L2Q5VW00 463 aa18.18■□□□□ 0.5
SYNGAP1-227ENST00000638142 STEAP1BQ6NZ63 245 aa18.18■□□□□ 0.5
SYNGAP1-227ENST00000638142 FBXO46Q6PJ61 603 aaPredicted RBP18.18■□□□□ 0.5
SYNGAP1-227ENST00000638142 LRRC69Q6ZNQ3 347 aa18.18■□□□□ 0.5
SYNGAP1-227ENST00000638142 BIVMQ86UB2 503 aa18.18■□□□□ 0.5
SYNGAP1-227ENST00000638142 OR52H1Q8NGJ2 320 aa18.18■□□□□ 0.5
SYNGAP1-227ENST00000638142 GPX8Q8TED1 209 aa18.18■□□□□ 0.5
SYNGAP1-227ENST00000638142 MMABQ96EY8 250 aaPredicted RBP18.18■□□□□ 0.5
SYNGAP1-227ENST00000638142 EXO5Q9H790 373 aa18.18■□□□□ 0.5
SYNGAP1-227ENST00000638142 UPB1Q9UBR1 384 aa18.18■□□□□ 0.5
SYNGAP1-227ENST00000638142 C17orf105B2RV13 164 aa18.17■□□□□ 0.5
SYNGAP1-227ENST00000638142 LINC01565O15544 149 aa18.17■□□□□ 0.5
SYNGAP1-227ENST00000638142 SEMA4FO95754 770 aa18.17■□□□□ 0.5
SYNGAP1-227ENST00000638142 CD3DP04234 171 aa18.17■□□□□ 0.5
SYNGAP1-227ENST00000638142 RPA2P15927 270 aa18.17■□□□□ 0.5
SYNGAP1-227ENST00000638142 SLC6A8P48029 635 aa18.17■□□□□ 0.5
SYNGAP1-227ENST00000638142 UBE2MP61081 183 aaKnown RBP18.17■□□□□ 0.5
SYNGAP1-227ENST00000638142 MRPS21P82921 87 aaKnown RBP18.17■□□□□ 0.5
SYNGAP1-227ENST00000638142 BIKQ13323 160 aa18.17■□□□□ 0.5
SYNGAP1-227ENST00000638142 SLC17A1Q14916 467 aa18.17■□□□□ 0.5
SYNGAP1-227ENST00000638142 FAM166AQ6J272 317 aa18.17■□□□□ 0.5
SYNGAP1-227ENST00000638142 CCDC107Q8WV48 283 aa18.17■□□□□ 0.5
SYNGAP1-227ENST00000638142 ZNF524Q96C55 264 aa18.17■□□□□ 0.5
SYNGAP1-227ENST00000638142 TCTN2Q96GX1 697 aa18.17■□□□□ 0.5
SYNGAP1-227ENST00000638142 C1orf198Q9H425 327 aa18.17■□□□□ 0.5
SYNGAP1-227ENST00000638142 TMEM272A0A1B0GTI8 110 aa18.17■□□□□ 0.5
SYNGAP1-227ENST00000638142 POM121CA8CG34 1229 aa18.17■□□□□ 0.5
SYNGAP1-227ENST00000638142 SULT1C2O00338 296 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms