RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 OR51A7Q8NH64 312 aa15.27■□□□□ 0.04
PNKP-230ENST00000638016 NSMAFQ92636 917 aa15.27■□□□□ 0.04
PNKP-230ENST00000638016 FOXN4Q96NZ1 517 aa15.27■□□□□ 0.04
PNKP-230ENST00000638016 TNFRSF13CQ96RJ3 184 aa15.27■□□□□ 0.04
PNKP-230ENST00000638016 FNDC11Q9BVV2 318 aa15.27■□□□□ 0.04
PNKP-230ENST00000638016 HIF3AQ9Y2N7 669 aa15.27■□□□□ 0.04
PNKP-230ENST00000638016 AP3M1Q9Y2T2 418 aa15.27■□□□□ 0.04
PNKP-230ENST00000638016 FKBP7Q9Y680 259 aa15.27■□□□□ 0.04
PNKP-230ENST00000638016 CUBNO60494 3623 aa15.27■□□□□ 0.03
PNKP-230ENST00000638016 IGHV4-61A0A0C4DH41 118 aa15.26■□□□□ 0.03
PNKP-230ENST00000638016 CRLF1O75462 422 aa15.26■□□□□ 0.03
PNKP-230ENST00000638016 ADRA2AP08913 450 aa15.26■□□□□ 0.03
PNKP-230ENST00000638016 FAM157BP0CG42 384 aa15.26■□□□□ 0.03
PNKP-230ENST00000638016 ZNF16P17020 682 aaPredicted RBP15.26■□□□□ 0.03
PNKP-230ENST00000638016 ZNF26P17031 533 aaPredicted RBP15.26■□□□□ 0.03
PNKP-230ENST00000638016 PDLIM4P50479 330 aa15.26■□□□□ 0.03
PNKP-230ENST00000638016 ERVS71-1P61550 626 aa15.26■□□□□ 0.03
PNKP-230ENST00000638016 CD47Q08722 323 aa15.26■□□□□ 0.03
PNKP-230ENST00000638016 TRAM2Q15035 370 aa15.26■□□□□ 0.03
PNKP-230ENST00000638016 C6orf52Q5T4I8 152 aa15.26■□□□□ 0.03
PNKP-230ENST00000638016 IL17RDQ8NFM7 739 aa15.26■□□□□ 0.03
PNKP-230ENST00000638016 MRPL24Q96A35 216 aaKnown RBP15.26■□□□□ 0.03
PNKP-230ENST00000638016 TSPAN32Q96QS1 320 aa15.26■□□□□ 0.03
PNKP-230ENST00000638016 TXNIPQ9H3M7 391 aa15.26■□□□□ 0.03
PNKP-230ENST00000638016 RNF121Q9H920 327 aa15.26■□□□□ 0.03
PNKP-230ENST00000638016 DYNLRB1Q9NP97 96 aa15.26■□□□□ 0.03
PNKP-230ENST00000638016 ZNF346Q9UL40 294 aaKnown RBP15.26■□□□□ 0.03
PNKP-230ENST00000638016 CMAHPQ9Y471 501 aa15.26■□□□□ 0.03
PNKP-230ENST00000638016 V9GYQ6 96 aa15.26■□□□□ 0.03
PNKP-230ENST00000638016 LYNX1G3V0Z9 82 aa15.25■□□□□ 0.03
PNKP-230ENST00000638016 H7C1C5 153 aa15.25■□□□□ 0.03
PNKP-230ENST00000638016 CDC42EP2O14613 210 aa15.25■□□□□ 0.03
PNKP-230ENST00000638016 DIRAS1O95057 198 aa15.25■□□□□ 0.03
PNKP-230ENST00000638016 SERPINA5P05154 406 aa15.25■□□□□ 0.03
PNKP-230ENST00000638016 CSF3P09919 207 aa15.25■□□□□ 0.03
PNKP-230ENST00000638016 IGHV4-31P0DP07 118 aa15.25■□□□□ 0.03
PNKP-230ENST00000638016 LYNX1P0DP58 116 aa15.25■□□□□ 0.03
PNKP-230ENST00000638016 SAGP10523 405 aaPredicted RBP15.25■□□□□ 0.03
PNKP-230ENST00000638016 TCN1P20061 433 aaPredicted RBP15.25■□□□□ 0.03
PNKP-230ENST00000638016 ALDH3B1P43353 468 aa15.25■□□□□ 0.03
PNKP-230ENST00000638016 ZNF133P52736 654 aaPredicted RBP15.25■□□□□ 0.03
PNKP-230ENST00000638016 CTXN1P60606 82 aa15.25■□□□□ 0.03
PNKP-230ENST00000638016 LCN6P62502 163 aa15.25■□□□□ 0.03
PNKP-230ENST00000638016 GNGT1P63211 74 aa15.25■□□□□ 0.03
PNKP-230ENST00000638016 PRKCDQ05655 676 aa15.25■□□□□ 0.03
PNKP-230ENST00000638016 FXNQ16595 210 aa15.25■□□□□ 0.03
PNKP-230ENST00000638016 GKAP1Q5VSY0 366 aaPredicted RBP15.25■□□□□ 0.03
PNKP-230ENST00000638016 SLC16A14Q7RTX9 510 aa15.25■□□□□ 0.03
PNKP-230ENST00000638016 SLC30A7Q8NEW0 376 aa15.25■□□□□ 0.03
PNKP-230ENST00000638016 NABP1Q96AH0 204 aa15.25■□□□□ 0.03
PNKP-230ENST00000638016 KCNK17Q96T54 332 aa15.25■□□□□ 0.03
PNKP-230ENST00000638016 BPESC1Q9GZL8 116 aa15.25■□□□□ 0.03
PNKP-230ENST00000638016 ADA2Q9NZK5 511 aa15.25■□□□□ 0.03
PNKP-230ENST00000638016 EFCAB9A8MZ26 197 aa15.24■□□□□ 0.03
PNKP-230ENST00000638016 FARS2O95363 451 aaKnown RBP15.24■□□□□ 0.03
PNKP-230ENST00000638016 MMP7P09237 267 aaPredicted RBP15.24■□□□□ 0.03
PNKP-230ENST00000638016 USF1P22415 310 aaPredicted RBP15.24■□□□□ 0.03
PNKP-230ENST00000638016 MSX2P35548 267 aaPredicted RBP15.24■□□□□ 0.03
PNKP-230ENST00000638016 NR4A2P43354 598 aa15.24■□□□□ 0.03
PNKP-230ENST00000638016 ZNF84P51523 738 aa15.24■□□□□ 0.03
PNKP-230ENST00000638016 VLDLRP98155 873 aa15.24■□□□□ 0.03
PNKP-230ENST00000638016 ALKBH6Q3KRA9 238 aa15.24■□□□□ 0.03
PNKP-230ENST00000638016 C10orf128Q5T292 105 aa15.24■□□□□ 0.03
PNKP-230ENST00000638016 ZNF730Q6ZMV8 503 aa15.24■□□□□ 0.03
PNKP-230ENST00000638016 ZNF519Q8TB69 540 aa15.24■□□□□ 0.03
PNKP-230ENST00000638016 ACOT11Q8WXI4 607 aaPredicted RBP15.24■□□□□ 0.03
PNKP-230ENST00000638016 CMTM5Q96DZ9 223 aa15.24■□□□□ 0.03
PNKP-230ENST00000638016 PIMREGQ9BSJ6 248 aa15.24■□□□□ 0.03
PNKP-230ENST00000638016 ARL8BQ9NVJ2 186 aa15.24■□□□□ 0.03
PNKP-230ENST00000638016 SVEP1Q4LDE5 3571 aa15.24■□□□□ 0.03
PNKP-230ENST00000638016 GMNCA6NCL1 334 aa15.23■□□□□ 0.03
PNKP-230ENST00000638016 TLX2O43763 284 aaPredicted RBP15.23■□□□□ 0.03
PNKP-230ENST00000638016 IGHMP01871 453 aa15.23■□□□□ 0.03
PNKP-230ENST00000638016 DAOP14920 347 aa15.23■□□□□ 0.03
PNKP-230ENST00000638016 APEX1P27695 318 aaKnown RBP15.23■□□□□ 0.03
PNKP-230ENST00000638016 PRDX6P30041 224 aa15.23■□□□□ 0.03
PNKP-230ENST00000638016 GLRXP35754 106 aa15.23■□□□□ 0.03
PNKP-230ENST00000638016 RPL27P61353 136 aaKnown RBP15.23■□□□□ 0.03
PNKP-230ENST00000638016 ERVK-25P63136 954 aa15.23■□□□□ 0.03
PNKP-230ENST00000638016 GALK2Q01415 458 aa15.23■□□□□ 0.03
PNKP-230ENST00000638016 OTPQ5XKR4 325 aa15.23■□□□□ 0.03
PNKP-230ENST00000638016 GLYATQ6IB77 296 aa15.23■□□□□ 0.03
PNKP-230ENST00000638016 SLC25A47Q6Q0C1 308 aa15.23■□□□□ 0.03
PNKP-230ENST00000638016 CPLX4Q7Z7G2 160 aa15.23■□□□□ 0.03
PNKP-230ENST00000638016 OAFQ86UD1 273 aa15.23■□□□□ 0.03
PNKP-230ENST00000638016 CPEB3Q8NE35 698 aaKnown RBP15.23■□□□□ 0.03
PNKP-230ENST00000638016 FAM46AQ96IP4 442 aaKnown RBP15.23■□□□□ 0.03
PNKP-230ENST00000638016 SOX7Q9BT81 388 aa15.23■□□□□ 0.03
PNKP-230ENST00000638016 NSRP1Q9H0G5 558 aaKnown RBP15.23■□□□□ 0.03
PNKP-230ENST00000638016 RAB1BQ9H0U4 201 aa15.23■□□□□ 0.03
PNKP-230ENST00000638016 NMNAT1Q9HAN9 279 aaPredicted RBP15.23■□□□□ 0.03
PNKP-230ENST00000638016 SPAG4Q9NPE6 437 aa15.23■□□□□ 0.03
PNKP-230ENST00000638016 NDUFAF4Q9P032 175 aa15.23■□□□□ 0.03
PNKP-230ENST00000638016 ADAM18Q9Y3Q7 739 aa15.23■□□□□ 0.03
PNKP-230ENST00000638016 ENPP4Q9Y6X5 453 aa15.23■□□□□ 0.03
PNKP-230ENST00000638016 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.23■□□□□ 0.03
PNKP-230ENST00000638016 TRBV4-1A0A0J9YWV2 114 aa15.22■□□□□ 0.03
PNKP-230ENST00000638016 LRP5LA4QPB2 252 aa15.22■□□□□ 0.03
PNKP-230ENST00000638016 NPIPB13A6NJU9 1138 aa15.22■□□□□ 0.03
PNKP-230ENST00000638016 A8MV72 311 aaPredicted RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms