RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 HS3ST1O14792 307 aa12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 UBL3O95164 117 aa12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 PPP1R3DO95685 299 aa12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 RAF1P04049 648 aa12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 FCGR1AP12314 374 aa12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 CBR1P16152 277 aa12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 NPR2P20594 1047 aa12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 ARR3P36575 388 aa12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 ARHGDIAP52565 204 aa12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 TUBA1BP68363 451 aa12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 TUBA4AP68366 448 aa12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 MRPS34P82930 218 aaKnown RBP12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 FMODQ06828 376 aa12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 COX10Q12887 443 aa12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 GSG1Q2KHT4 349 aa12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 SLC25A47Q6Q0C1 308 aa12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 C20orf204Q6ZNR8 217 aa12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 TUBA1AQ71U36 451 aa12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 NRGNQ92686 78 aa12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 GTPBP3Q969Y2 492 aaKnown RBP12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 RASD2Q96D21 266 aa12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 SAMD8Q96LT4 415 aa12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 ERMAPQ96PL5 475 aaPredicted RBP12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 FEVQ99581 238 aa12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 IFT27Q9BW83 186 aa12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 EGLN3Q9H6Z9 239 aa12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 B3GNT2Q9NY97 397 aa12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 VSX1Q9NZR4 365 aaPredicted RBP12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 FBXL3Q9UKT7 428 aa12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 UGT2A1Q9Y4X1 527 aa12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 AP4S1Q9Y587 144 aa12.86□□□□□ -0.35
CDC42BPB-209ENST00000634889 TEX15Q9BXT5 2789 aa12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 IGHV1-18A0A0C4DH31 117 aa12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 SLC22A23A1A5C7 686 aa12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 ZNF503-AS2A6NEH8 195 aa12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 SHISA9B4DS77 424 aa12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 SOCS2O14508 198 aa12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 TIPRLO75663 272 aa12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 PLAUP00749 431 aa12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 HLA-HP01893 362 aa12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 CD79AP11912 226 aa12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 NOS3P29474 1203 aa12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 CAPZA2P47755 286 aa12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 IST1P53990 364 aa12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 ACTR3P61158 418 aa12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 ATP6AP1Q15904 470 aa12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 ZNF672Q499Z4 452 aaPredicted RBP12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 SHQ1Q6PI26 577 aaKnown RBP12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 FOXL2NBQ6ZUU3 175 aa12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 TMEM179BQ7Z7N9 219 aa12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 DEPDC4Q8N2C3 294 aa12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 PIAS4Q8N2W9 510 aaPredicted RBP12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 KBTBD8Q8NFY9 601 aa12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 LILRB1Q8NHL6 650 aaPredicted RBP12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 AKAP1Q92667 903 aaKnown RBP eCLIP12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 NRBF2Q96F24 287 aa12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 SNX18Q96RF0 628 aa12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 LIME1Q9H400 295 aa12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 UBTD1Q9HAC8 227 aa12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 SIAEQ9HAT2 523 aa12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 ZNF224Q9NZL3 707 aa12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 PDP1Q9P0J1 537 aaPredicted RBP12.85□□□□□ -0.35
CDC42BPB-209ENST00000634889 PRR14LQ5THK1 2151 aa12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 ANKRD17O75179 2603 aaKnown RBP12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 IGKV1D-43A0A0B4J1Z2 117 aa12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 H7C1C5 153 aa12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 CRYAAP02489 173 aa12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 CECR9P0C854 216 aa12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 ANXA8P13928 327 aa12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 DNASE1P24855 282 aa12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 FASP25445 335 aa12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 GUCA1AP43080 201 aaPredicted RBP12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 LCN6P62502 163 aa12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 KEAP1Q14145 624 aa12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 SLC36A2Q495M3 483 aa12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 SLC22A25Q6T423 547 aa12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 MDP1Q86V88 176 aa12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 JAZF1Q86VZ6 243 aa12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 SKA3Q8IX90 412 aa12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 ZNF611Q8N823 705 aa12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 IL17RDQ8NFM7 739 aa12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 NSMAFQ92636 917 aa12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 FBXW5Q969U6 566 aa12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 RAB3IPQ96QF0 476 aaPredicted RBP12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 NIPSNAP1Q9BPW8 284 aa12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 KCNS3Q9BQ31 491 aa12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 BDH2Q9BUT1 245 aa12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 ZNF556Q9HAH1 456 aa12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 NTN4Q9HB63 628 aa12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 TBC1D23Q9NUY8 699 aa12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 BAIAP2Q9UQB8 552 aa12.84□□□□□ -0.35
CDC42BPB-209ENST00000634889 ABCA4P78363 2273 aa12.83□□□□□ -0.35
CDC42BPB-209ENST00000634889 BHLHE40O14503 412 aa12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 TMCC2O75069 709 aa12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 ATE1O95260 518 aa12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 RAB36O95755 333 aa12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 CRABP1P29762 137 aa12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 CDAP32320 146 aa12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 CDKN2AP42771 156 aaKnown RBP12.83□□□□□ -0.36
CDC42BPB-209ENST00000634889 IDH3GP51553 393 aaPredicted RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms