RNA–Protein interactions for RNA: ENST00000634451.2

LINC00339-206, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 687 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-206ENST00000634451 TMEM27Q9HBJ8 222 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 NPHS2Q9NP85 383 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 TCF7L2Q9NQB0 619 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 THUMPD1Q9NXG2 353 aaKnown RBP10.91□□□□□ -0.66
LINC00339-206ENST00000634451 ZNF69Q9UC07 566 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 LEF1Q9UJU2 399 aaPredicted RBP10.91□□□□□ -0.66
LINC00339-206ENST00000634451 PRDM4Q9UKN5 801 aa10.91□□□□□ -0.66
LINC00339-206ENST00000634451 IGHV3OR16-10A0A075B7F0 116 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 ISPDA4D126 451 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 CLDN25C9JDP6 229 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 MFN2O95140 757 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 SLC2A10O95528 541 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 BCL10O95999 233 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 HKR1P10072 659 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 CCNOP22674 350 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 LSP1P33241 339 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 LIMS1P48059 325 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 UCP2P55851 309 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 FMODQ06828 376 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 SELPLGQ14242 412 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 DUSP7Q16829 419 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 TUSC1Q2TAM9 212 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 PDLIM3Q53GG5 364 aaPredicted RBP10.9□□□□□ -0.66
LINC00339-206ENST00000634451 THEM4Q5T1C6 240 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 LRIF1Q5T3J3 769 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 LINC00114Q6XXX2 140 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 RFPL4BQ6ZWI9 263 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 GOLGA6L1Q8N7Z2 621 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 SYT14Q8NB59 555 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 OR1J1Q8NGS3 322 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 AKR7LQ8NHP1 331 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 VANGL1Q8TAA9 524 aaPredicted RBP10.9□□□□□ -0.66
LINC00339-206ENST00000634451 ZNF519Q8TB69 540 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 SNX33Q8WV41 574 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 ZNF566Q969W8 418 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 RAB39BQ96DA2 213 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 JMJD8Q96S16 334 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 MCHR1Q99705 422 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 ARHGDIGQ99819 225 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 TMEM43Q9BTV4 400 aa10.9□□□□□ -0.66
LINC00339-206ENST00000634451 LOC100509620A0A075B734 347 aa10.89□□□□□ -0.67
LINC00339-206ENST00000634451 TRAPPC2LH3BP13 241 aa10.89□□□□□ -0.67
LINC00339-206ENST00000634451 RNF13O43567 381 aa10.89□□□□□ -0.67
LINC00339-206ENST00000634451 UBOX5O94941 541 aa10.89□□□□□ -0.67
LINC00339-206ENST00000634451 F13BP05160 661 aa10.89□□□□□ -0.67
LINC00339-206ENST00000634451 ZNF81P51508 661 aa10.89□□□□□ -0.67
LINC00339-206ENST00000634451 MMP15P51511 669 aa10.89□□□□□ -0.67
LINC00339-206ENST00000634451 SRSF4Q08170 494 aaKnown RBP10.89□□□□□ -0.67
LINC00339-206ENST00000634451 TBC1D28Q2M2D7 210 aa10.89□□□□□ -0.67
LINC00339-206ENST00000634451 PABPC1L2AQ5JQF8 200 aa10.89□□□□□ -0.67
LINC00339-206ENST00000634451 SLC16A14Q7RTX9 510 aa10.89□□□□□ -0.67
LINC00339-206ENST00000634451 PTOV1Q86YD1 416 aa10.89□□□□□ -0.67
LINC00339-206ENST00000634451 ARMC8Q8IUR7 673 aa10.89□□□□□ -0.67
LINC00339-206ENST00000634451 KIRREL3Q8IZU9 778 aa10.89□□□□□ -0.67
LINC00339-206ENST00000634451 CLDN22Q8N7P3 220 aa10.89□□□□□ -0.67
LINC00339-206ENST00000634451 RBM15BQ8NDT2 890 aaKnown RBP10.89□□□□□ -0.67
LINC00339-206ENST00000634451 C11orf40Q8WZ69 217 aa10.89□□□□□ -0.67
LINC00339-206ENST00000634451 MCHR2Q969V1 340 aa10.89□□□□□ -0.67
LINC00339-206ENST00000634451 EBF4Q9BQW3 602 aa10.89□□□□□ -0.67
LINC00339-206ENST00000634451 CPPED1Q9BRF8 314 aaPredicted RBP10.89□□□□□ -0.67
LINC00339-206ENST00000634451 POFUT1Q9H488 388 aa10.89□□□□□ -0.67
LINC00339-206ENST00000634451 RAD21L1Q9H4I0 556 aa10.89□□□□□ -0.67
LINC00339-206ENST00000634451 DENND2DQ9H6A0 471 aaPredicted RBP10.89□□□□□ -0.67
LINC00339-206ENST00000634451 UNKLQ9H9P5 680 aaKnown RBP10.89□□□□□ -0.67
LINC00339-206ENST00000634451 DECR2Q9NUI1 292 aa10.89□□□□□ -0.67
LINC00339-206ENST00000634451 NKIRAS2Q9NYR9 191 aa10.89□□□□□ -0.67
LINC00339-206ENST00000634451 SELENONQ9NZV5 590 aa10.89□□□□□ -0.67
LINC00339-206ENST00000634451 TRIM33Q9UPN9 1127 aa10.89□□□□□ -0.67
LINC00339-206ENST00000634451 UGT2A1Q9Y4X1 527 aa10.89□□□□□ -0.67
LINC00339-206ENST00000634451 MDFIC2A0A1B0GVS7 189 aa10.88□□□□□ -0.67
LINC00339-206ENST00000634451 J3QLI3 93 aa10.88□□□□□ -0.67
LINC00339-206ENST00000634451 MGRN1O60291 552 aa10.88□□□□□ -0.67
LINC00339-206ENST00000634451 SNAP29O95721 258 aa10.88□□□□□ -0.67
LINC00339-206ENST00000634451 MT-ATP6P00846 226 aa10.88□□□□□ -0.67
LINC00339-206ENST00000634451 NGFP01138 241 aa10.88□□□□□ -0.67
LINC00339-206ENST00000634451 IGHV3-13P01766 116 aa10.88□□□□□ -0.67
LINC00339-206ENST00000634451 ANPEPP15144 967 aa10.88□□□□□ -0.67
LINC00339-206ENST00000634451 ZNF32P17041 273 aa10.88□□□□□ -0.67
LINC00339-206ENST00000634451 SCGB2A2Q13296 93 aa10.88□□□□□ -0.67
LINC00339-206ENST00000634451 HFEQ30201 348 aa10.88□□□□□ -0.67
LINC00339-206ENST00000634451 PCGF3Q3KNV8 242 aa10.88□□□□□ -0.67
LINC00339-206ENST00000634451 ENTPD8Q5MY95 495 aa10.88□□□□□ -0.67
LINC00339-206ENST00000634451 WDR93Q6P2C0 686 aa10.88□□□□□ -0.67
LINC00339-206ENST00000634451 TMEM53Q6P2H8 277 aa10.88□□□□□ -0.67
LINC00339-206ENST00000634451 NOXO1Q8NFA2 376 aa10.88□□□□□ -0.67
LINC00339-206ENST00000634451 PFN4Q8NHR9 129 aa10.88□□□□□ -0.67
LINC00339-206ENST00000634451 SLC25A40Q8TBP6 338 aa10.88□□□□□ -0.67
LINC00339-206ENST00000634451 NABP1Q96AH0 204 aa10.88□□□□□ -0.67
LINC00339-206ENST00000634451 MARS2Q96GW9 593 aaKnown RBP10.88□□□□□ -0.67
LINC00339-206ENST00000634451 SLC25A44Q96H78 314 aaPredicted RBP10.88□□□□□ -0.67
LINC00339-206ENST00000634451 DCLRE1CQ96SD1 692 aaKnown RBP10.88□□□□□ -0.67
LINC00339-206ENST00000634451 PARD6BQ9BYG5 372 aa10.88□□□□□ -0.67
LINC00339-206ENST00000634451 OR2J1Q9GZK6 312 aa10.88□□□□□ -0.67
LINC00339-206ENST00000634451 ZNF696Q9H7X3 374 aa10.88□□□□□ -0.67
LINC00339-206ENST00000634451 MSL2Q9HCI7 577 aa10.88□□□□□ -0.67
LINC00339-206ENST00000634451 MEPEQ9NQ76 525 aaPredicted RBP10.88□□□□□ -0.67
LINC00339-206ENST00000634451 DDX28Q9NUL7 540 aaKnown RBP10.88□□□□□ -0.67
LINC00339-206ENST00000634451 SLCO1C1Q9NYB5 712 aa10.88□□□□□ -0.67
LINC00339-206ENST00000634451 CCDC167Q9P0B6 97 aa10.88□□□□□ -0.67
LINC00339-206ENST00000634451 SLC7A7Q9UM01 511 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms