RNA–Protein interactions for RNA: ENST00000628606.1

CHRNA4-211, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

Gene CHRNA4, Length 183 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-211ENST00000628606 FNDC8Q8TC99 324 aa13.77□□□□□ -0.21
CHRNA4-211ENST00000628606 LRMDAQ9H2I8 198 aa13.77□□□□□ -0.21
CHRNA4-211ENST00000628606 C1orf198Q9H425 327 aa13.77□□□□□ -0.21
CHRNA4-211ENST00000628606 ANKRD19PQ9H560 264 aa13.77□□□□□ -0.21
CHRNA4-211ENST00000628606 MYOZ1Q9NP98 299 aaPredicted RBP13.77□□□□□ -0.21
CHRNA4-211ENST00000628606 ZNF224Q9NZL3 707 aa13.77□□□□□ -0.21
CHRNA4-211ENST00000628606 ENPP4Q9Y6X5 453 aa13.77□□□□□ -0.21
CHRNA4-211ENST00000628606 CR1P17927 2039 aa13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 IQCMA0A1B0GVH7 501 aa13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 SH3PXD2BA1X283 911 aa13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 A6NIZ1 184 aa13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 FFAR1O14842 300 aa13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 ZNF35P13682 527 aa13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 MAKP20794 623 aa13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 RPL4P36578 427 aaKnown RBP13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 RAP1BP61224 184 aa13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 RAP1AP62834 184 aa13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 ARMC4Q5T2S8 1044 aa13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 FAM205BPQ63HN1 556 aa13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 MBOAT2Q6ZWT7 520 aa13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 SVOPLQ8N434 492 aa13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 LRRC18Q8N456 261 aa13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 RNF148Q8N7C7 305 aa13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 RBM15BQ8NDT2 890 aaKnown RBP13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 OR1J2Q8NGS2 313 aa13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 SORCS2Q96PQ0 1159 aa13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 ALG12Q9BV10 488 aa13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 NMNAT1Q9HAN9 279 aaPredicted RBP13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 SMURF2Q9HAU4 748 aa13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 CDH20Q9HBT6 801 aa13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 CCNB1IP1Q9NPC3 277 aa13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 KRCC1Q9NPI7 259 aaPredicted RBP13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 MAN2C1Q9NTJ4 1040 aa13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 DCAF13Q9NV06 445 aaKnown RBP13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 NDE1Q9NXR1 346 aa13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 SLC7A8Q9UHI5 535 aa13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 TAGLN3Q9UI15 199 aa13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 TMEM5Q9Y2B1 443 aa13.76□□□□□ -0.21
CHRNA4-211ENST00000628606 TRAV27A0A087WT01 109 aa13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 A0A087WUU8 490 aa13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 SLC22A23A1A5C7 686 aa13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 INAFM1C9JVW0 142 aa13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 NDUFS8O00217 210 aa13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 LY6HO94772 140 aa13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 H1F0P07305 194 aaKnown RBP13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 ITGA2P17301 1181 aa13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 RHCEP18577 417 aa13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 TCN1P20061 433 aaPredicted RBP13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 GLRXP35754 106 aa13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 MNAT1P51948 309 aa13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 SELENOVP59797 346 aa13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 HSF2Q03933 536 aa13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 SGCAQ16586 387 aa13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 FGD3Q5JSP0 725 aa13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 SAMD4BQ5PRF9 694 aaKnown RBP13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 THEM4Q5T1C6 240 aa13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 C10orf128Q5T292 105 aa13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 TBPL2Q6SJ96 375 aa13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 C16orf89Q6UX73 402 aa13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 ANKS4BQ8N8V4 417 aa13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 SLC30A7Q8NEW0 376 aa13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 C10orf105Q8TEF2 133 aa13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 NEU4Q8WWR8 484 aaPredicted RBP13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 NSMAFQ92636 917 aa13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 ZNF75AQ96N20 296 aa13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 TNFRSF13CQ96RJ3 184 aa13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 SEPHS2Q99611 448 aa13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 PIMREGQ9BSJ6 248 aa13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 SIAEQ9HAT2 523 aa13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 MAGEL2Q9UJ55 1249 aa13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 ZNF346Q9UL40 294 aaKnown RBP13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 FN1P02751 2386 aaKnown RBP13.75□□□□□ -0.21
CHRNA4-211ENST00000628606 LOC390937A0A1W2PQ73 354 aa13.74□□□□□ -0.21
CHRNA4-211ENST00000628606 XKRYO14609 159 aa13.74□□□□□ -0.21
CHRNA4-211ENST00000628606 TLX2O43763 284 aaPredicted RBP13.74□□□□□ -0.21
CHRNA4-211ENST00000628606 SLC2A10O95528 541 aa13.74□□□□□ -0.21
CHRNA4-211ENST00000628606 IGHMP01871 453 aa13.74□□□□□ -0.21
CHRNA4-211ENST00000628606 EVX1P49640 407 aa13.74□□□□□ -0.21
CHRNA4-211ENST00000628606 MRPS34P82930 218 aaKnown RBP13.74□□□□□ -0.21
CHRNA4-211ENST00000628606 LSM11P83369 360 aaKnown RBP eCLIP13.74□□□□□ -0.21
CHRNA4-211ENST00000628606 LOXL1Q08397 574 aaPredicted RBP13.74□□□□□ -0.21
CHRNA4-211ENST00000628606 TBC1D28Q2M2D7 210 aa13.74□□□□□ -0.21
CHRNA4-211ENST00000628606 ZBED5Q49AG3 693 aa13.74□□□□□ -0.21
CHRNA4-211ENST00000628606 PIGWQ7Z7B1 504 aa13.74□□□□□ -0.21
CHRNA4-211ENST00000628606 IGFN1Q86VF2 1251 aa13.74□□□□□ -0.21
CHRNA4-211ENST00000628606 MEX3DQ86XN8 651 aaKnown RBP13.74□□□□□ -0.21
CHRNA4-211ENST00000628606 PGAM4Q8N0Y7 254 aa13.74□□□□□ -0.21
CHRNA4-211ENST00000628606 ZNF540Q8NDQ6 660 aa13.74□□□□□ -0.21
CHRNA4-211ENST00000628606 FGFBP3Q8TAT2 258 aa13.74□□□□□ -0.21
CHRNA4-211ENST00000628606 HDAC2Q92769 488 aaKnown RBP13.74□□□□□ -0.21
CHRNA4-211ENST00000628606 MRPL24Q96A35 216 aaKnown RBP13.74□□□□□ -0.21
CHRNA4-211ENST00000628606 MCUR1Q96AQ8 359 aa13.74□□□□□ -0.21
CHRNA4-211ENST00000628606 KCNK17Q96T54 332 aa13.74□□□□□ -0.21
CHRNA4-211ENST00000628606 CDRT15Q96T59 188 aa13.74□□□□□ -0.21
CHRNA4-211ENST00000628606 DOK1Q99704 481 aa13.74□□□□□ -0.21
CHRNA4-211ENST00000628606 GORASP2Q9H8Y8 452 aa13.74□□□□□ -0.21
CHRNA4-211ENST00000628606 YAE1D1Q9NRH1 226 aa13.74□□□□□ -0.21
CHRNA4-211ENST00000628606 GRHPRQ9UBQ7 328 aa13.74□□□□□ -0.21
CHRNA4-211ENST00000628606 AURKCQ9UQB9 309 aa13.74□□□□□ -0.21
CHRNA4-211ENST00000628606 A0A1W2PRQ8 180 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms