RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 C16orf45Q96MC5 204 aaPredicted RBP1.77□□□□□ -2.13
VBP1-204ENST00000625964 ZNF641Q96N77 438 aaPredicted RBP1.77□□□□□ -2.13
VBP1-204ENST00000625964 RIBC2Q9H4K1 309 aa1.77□□□□□ -2.13
VBP1-204ENST00000625964 MRPL47Q9HD33 250 aaKnown RBP1.77□□□□□ -2.13
VBP1-204ENST00000625964 TMOD2Q9NZR1 351 aa1.77□□□□□ -2.13
VBP1-204ENST00000625964 F11RQ9Y624 299 aaKnown RBP1.77□□□□□ -2.13
VBP1-204ENST00000625964 CASZ1Q86V15 1759 aa1.77□□□□□ -2.13
VBP1-204ENST00000625964 NEXMIFQ5QGS0 1516 aa1.77□□□□□ -2.13
VBP1-204ENST00000625964 SBNO1A3KN83 1393 aa1.77□□□□□ -2.13
VBP1-204ENST00000625964 ARHGEF10O15013 1369 aa1.77□□□□□ -2.13
VBP1-204ENST00000625964 DHX57Q6P158 1386 aaKnown RBP1.77□□□□□ -2.13
VBP1-204ENST00000625964 RPAP1Q9BWH6 1393 aaPredicted RBP1.77□□□□□ -2.13
VBP1-204ENST00000625964 MARF1Q9Y4F3 1742 aaKnown RBP1.77□□□□□ -2.13
VBP1-204ENST00000625964 CCDC144AA2RUR9 1427 aa1.77□□□□□ -2.13
VBP1-204ENST00000625964 USP32Q8NFA0 1604 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 OR5B21A6NL26 309 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 ARPC3O15145 178 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 PRKAB2O43741 272 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 SCGNO76038 276 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 UBTFL1P0CB47 393 aaPredicted RBP1.76□□□□□ -2.13
VBP1-204ENST00000625964 MUC1P15941 1255 aaPredicted RBP1.76□□□□□ -2.13
VBP1-204ENST00000625964 SLC2A5P22732 501 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 OMGP23515 440 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 CCR1P32246 355 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 ACAA2P42765 397 aaKnown RBP1.76□□□□□ -2.13
VBP1-204ENST00000625964 NCBP2P52298 156 aaKnown RBP eCLIP1.76□□□□□ -2.13
VBP1-204ENST00000625964 CRYBB1P53674 252 aaPredicted RBP1.76□□□□□ -2.13
VBP1-204ENST00000625964 NCBP1Q09161 790 aaKnown RBP1.76□□□□□ -2.13
VBP1-204ENST00000625964 STK11Q15831 433 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 UTS2BQ765I0 119 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 NUDCD3Q8IVD9 361 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 MFSD9Q8NBP5 474 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 OR5W2Q8NH69 310 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 PYROXD1Q8WU10 500 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 SDR42E1Q8WUS8 393 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 LRRC58Q96CX6 371 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 RAB33BQ9H082 229 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 YY1AP1Q9H869 796 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 LIN28AQ9H9Z2 209 aaKnown RBP1.76□□□□□ -2.13
VBP1-204ENST00000625964 LY9Q9HBG7 655 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 CD84Q9UIB8 345 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 PACSIN2Q9UNF0 486 aaPredicted RBP1.76□□□□□ -2.13
VBP1-204ENST00000625964 PHF3Q92576 2039 aaKnown RBP1.76□□□□□ -2.13
VBP1-204ENST00000625964 IGSF9BQ9UPX0 1349 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 WDR90Q96KV7 1748 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 KIF15Q9NS87 1388 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 TNS3Q68CZ2 1445 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 CROCC2H7BZ55 1655 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 THSD7AQ9UPZ6 1657 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 IGLV3-22A0A075B6J6 115 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 IGHV3-66A0A0C4DH42 116 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 INS-IGF2F8WCM5 200 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 K7EQM0 130 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 TCN1P20061 433 aaPredicted RBP1.76□□□□□ -2.13
VBP1-204ENST00000625964 PSMA5P28066 241 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 RORAP35398 523 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 SOX6P35712 828 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 SLC7A9P82251 487 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 ELP6Q0PNE2 266 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 FAM92BQ6ZTR7 304 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 ARRDC1Q8N5I2 433 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 FAM133AQ8N9E0 248 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 OR2T34Q8NGX1 318 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 PHF10Q8WUB8 498 aaKnown RBP1.76□□□□□ -2.13
VBP1-204ENST00000625964 DTNBP1Q96EV8 351 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 PDXPQ96GD0 296 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 SLC38A2Q96QD8 506 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 OR2A5Q96R48 311 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 ZNF607Q96SK3 696 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 GABARAPL3Q9BY60 117 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 EXD2Q9NVH0 621 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 SMOXQ9NWM0 555 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 CRCT1Q9UGL9 99 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 XRN1Q8IZH2 1706 aaKnown RBP1.76□□□□□ -2.13
VBP1-204ENST00000625964 NWD2Q9ULI1 1742 aa1.76□□□□□ -2.13
VBP1-204ENST00000625964 LMTK2Q8IWU2 1503 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 PTPN23Q9H3S7 1636 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 OVOS2A0A0G2JMS6 1433 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 OVOS2A0A0J9YW53 1432 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 HFM1A2PYH4 1435 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 TECPR2O15040 1411 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 OVOS2Q6IE36 1432 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 ERBINQ96RT1 1412 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 CEP152O94986 1710 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 DUOX2Q9NRD8 1548 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 IGHV5-51A0A0C4DH38 117 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 C7orf66A4D0T2 115 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 PEX11AO75192 247 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 GAPDHP04406 335 aaKnown RBP1.75□□□□□ -2.13
VBP1-204ENST00000625964 HEXBP07686 556 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 IQCF3P0C7M6 154 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 SMIM10L1P0DMW3 83 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 HSPA5P11021 654 aaKnown RBP1.75□□□□□ -2.13
VBP1-204ENST00000625964 PRPS2P11908 318 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 PSMC3P17980 439 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 GDI1P31150 447 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 CYB561P49447 251 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 SUB1P53999 127 aaKnown RBP eCLIP1.75□□□□□ -2.138e-7■■■□□ 16.6
VBP1-204ENST00000625964 AQP6Q13520 282 aa1.75□□□□□ -2.13
VBP1-204ENST00000625964 FILIP1LQ4L180 1135 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms