RNA–Protein interactions for RNA: ENST00000624354.3

VCL-207, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 3,307 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-207ENST00000624354 TAS2R8Q9NYW2 309 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 OPN4Q9UHM6 478 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 TMEM82A0PJX8 343 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 TMEM72A0PK05 275 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 WRBO00258 174 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 TO15178 435 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 LINC01565O15544 149 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 GLSO94925 669 aaPredicted RBP7.91□□□□□ -1.14
VCL-207ENST00000624354 CSTAP01040 98 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 IGKV1D-16P01601 117 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 PTAFRP25105 342 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 PTGFRP43088 359 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 SNRPEP62304 92 aaKnown RBP7.91□□□□□ -1.14
VCL-207ENST00000624354 ENPP2Q13822 863 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 ZNF684Q5T5D7 378 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 LINC01590Q5TEZ4 76 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 HOXB13Q92826 284 aaPredicted RBP7.91□□□□□ -1.14
VCL-207ENST00000624354 ANKRD9Q96BM1 317 aaPredicted RBP7.91□□□□□ -1.14
VCL-207ENST00000624354 LMF2Q9BU23 707 aaKnown RBP7.91□□□□□ -1.14
VCL-207ENST00000624354 TRPV4Q9HBA0 871 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 DCAF16Q9NXF7 216 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 CDV3Q9UKY7 258 aaKnown RBP7.91□□□□□ -1.14
VCL-207ENST00000624354 DOCK9Q9BZ29 2069 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 EFCAB7A8K855 629 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 PRR32B1ATL7 298 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 BLOC1S5-TXNDC5H3BN57 136 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 H7C417 338 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 MAS1P04201 325 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 UBBP0CG47 229 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 UBCP0CG48 685 aaKnown RBP7.91□□□□□ -1.14
VCL-207ENST00000624354 PVRP15151 417 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 ADRA2CP18825 462 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 CNR1P21554 472 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 GRK6P43250 576 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 ADPRHP54922 357 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 RPS27AP62979 156 aaKnown RBP7.91□□□□□ -1.14
VCL-207ENST00000624354 UBA52P62987 128 aaKnown RBP7.91□□□□□ -1.14
VCL-207ENST00000624354 OC90Q02509 493 aaPredicted RBP7.91□□□□□ -1.14
VCL-207ENST00000624354 GPM6BQ13491 265 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 FAM53BQ14153 422 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 ZNF141Q15928 474 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 DHRS7BQ6IAN0 325 aaPredicted RBP7.91□□□□□ -1.14
VCL-207ENST00000624354 RBMS3Q6XE24 437 aaKnown RBP7.91□□□□□ -1.14
VCL-207ENST00000624354 DBX2Q6ZNG2 339 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 DGAT2L6Q6ZPD8 337 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 SLC16A9Q7RTY1 509 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 ZNF227Q86WZ6 799 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 YAF2Q8IY57 180 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 OR5M1Q8NGP8 315 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 SP7Q8TDD2 431 aaPredicted RBP7.91□□□□□ -1.14
VCL-207ENST00000624354 RSC1A1Q92681 617 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 TSACCQ96A04 125 aaPredicted RBP7.91□□□□□ -1.14
VCL-207ENST00000624354 RBM18Q96H35 190 aaKnown RBP7.91□□□□□ -1.14
VCL-207ENST00000624354 Q96M85 177 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 OR1F2PQ96R84 312 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 OBP2AQ9NY56 170 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 RASL12Q9NYN1 266 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 MTFP1Q9UDX5 166 aa7.91□□□□□ -1.14
VCL-207ENST00000624354 PMS2P1A4D2B8 440 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 F5H5P2 479 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 XRCC3O43542 346 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 GUSBP08236 651 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 CSF1P09603 554 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 TMIGD3P0DMS9 266 aaPredicted RBP7.9□□□□□ -1.14
VCL-207ENST00000624354 VSIG10L2P0DP72 767 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 PSMD4P55036 377 aaKnown RBP7.9□□□□□ -1.14
VCL-207ENST00000624354 RAB5BP61020 215 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 GPR18Q14330 331 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 GUCA2BQ16661 112 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 MANEAQ5SRI9 462 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 UQCC3Q6UW78 93 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 C10orf53Q8N6V4 93 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 CSNK1A1LQ8N752 337 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 BOLLQ8N9W6 283 aaKnown RBP7.9□□□□□ -1.14
VCL-207ENST00000624354 OR4C16Q8NGL9 310 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 ZNF417Q8TAU3 575 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 TNFAIP8L1Q8WVP5 186 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 TSSK2Q96PF2 358 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 ADAT1Q9BUB4 502 aaKnown RBP7.9□□□□□ -1.14
VCL-207ENST00000624354 G6PC3Q9BUM1 346 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 COMMD4Q9H0A8 199 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 PIGMQ9H3S5 423 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 Q9N2J8 555 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 TMEM138Q9NPI0 162 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 ZFP57Q9NU63 452 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 FRRS1LQ9P0K9 344 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 IKZF2Q9UKS7 526 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 MOKQ9UQ07 419 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 A0A087WV48 116 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 TMEM218A2RU14 115 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 UPK3AO75631 287 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 ZNF35P13682 527 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 CBR1P16152 277 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 BTF3P20290 206 aaKnown RBP7.9□□□□□ -1.14
VCL-207ENST00000624354 CDKN2AP42771 156 aaKnown RBP7.9□□□□□ -1.14
VCL-207ENST00000624354 SEC13P55735 322 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 H2BFSP57053 126 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 SCAND1P57086 179 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 RAB38P57729 211 aa7.9□□□□□ -1.14
VCL-207ENST00000624354 UBE2IP63279 158 aaKnown RBP7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms