RNA–Protein interactions for RNA: ENST00000623461.3

VCL-206, Transcript of vinculin, humanhuman

TSL 1 (best)

Gene VCL, Length 7,995 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-206ENST00000623461 SLC5A10A0PJK1 596 aa8.21□□□□□ -1.09
VCL-206ENST00000623461 CBY3A6NI87 242 aa8.21□□□□□ -1.09
VCL-206ENST00000623461 DSCR3O14972 297 aa8.21□□□□□ -1.09
VCL-206ENST00000623461 AIFM1O95831 613 aa8.21□□□□□ -1.09
VCL-206ENST00000623461 CFIP05156 583 aa8.21□□□□□ -1.09
VCL-206ENST00000623461 TYRP1P17643 537 aa8.21□□□□□ -1.09
VCL-206ENST00000623461 PFN3P60673 137 aa8.21□□□□□ -1.09
VCL-206ENST00000623461 PDLIM3Q53GG5 364 aaPredicted RBP8.21□□□□□ -1.09
VCL-206ENST00000623461 ZNF574Q6ZN55 896 aaPredicted RBP8.21□□□□□ -1.09
VCL-206ENST00000623461 HSD11B1LQ7Z5J1 315 aa8.21□□□□□ -1.09
VCL-206ENST00000623461 FJX1Q86VR8 437 aa8.21□□□□□ -1.09
VCL-206ENST00000623461 MS4A8Q9BY19 250 aa8.21□□□□□ -1.09
VCL-206ENST00000623461 CHRDQ9H2X0 955 aa8.21□□□□□ -1.09
VCL-206ENST00000623461 KCNIP2Q9NS61 270 aa8.21□□□□□ -1.09
VCL-206ENST00000623461 ZNF586Q9NXT0 402 aa8.21□□□□□ -1.09
VCL-206ENST00000623461 STRCQ7RTU9 1775 aa8.21□□□□□ -1.09
VCL-206ENST00000623461 MAKP20794 623 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 DVL1P1P54792 670 aaPredicted RBP8.21□□□□□ -1.1
VCL-206ENST00000623461 SNU13P55769 128 aaKnown RBP8.21□□□□□ -1.1
VCL-206ENST00000623461 AARDQ4LEZ3 155 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 LBHQ53QV2 105 aaPredicted RBP8.21□□□□□ -1.1
VCL-206ENST00000623461 OGFOD3Q6PK18 319 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 DOK4Q8TEW6 326 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 PPP1R1CQ8WVI7 109 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 TSLPQ969D9 159 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 SDSLQ96GA7 329 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 LYSMD1Q96S90 227 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 PAAF1Q9BRP4 392 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 RHNO1Q9BSD3 238 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 CABLES2Q9BTV7 478 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 PDE7BQ9NP56 450 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 RYDENQ9NUL5 291 aaKnown RBP8.21□□□□□ -1.1
VCL-206ENST00000623461 APOA2P02652 100 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 THBS1P07996 1170 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 EPXP11678 715 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 GDI1P31150 447 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 P2RX1P51575 399 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 SQSTM1Q13501 440 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 ZNF628Q5EBL2 1059 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 BCL7CQ8WUZ0 217 aaPredicted RBP8.21□□□□□ -1.1
VCL-206ENST00000623461 PEX11GQ96HA9 241 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 SLC46A1Q96NT5 459 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 NMNAT3Q96T66 252 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 TNFRSF12AQ9NP84 129 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 KLF15Q9UIH9 416 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 MIA3Q5JRA6 1907 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 G0S2P27469 103 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 RGRP47804 291 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 OR10A3P58181 314 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 SUMO1P63165 101 aaKnown RBP8.21□□□□□ -1.1
VCL-206ENST00000623461 ENDOGQ14249 297 aaKnown RBP8.21□□□□□ -1.1
VCL-206ENST00000623461 TMPRSS7Q7RTY8 843 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 PTOV1Q86YD1 416 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 CPXM2Q8N436 756 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 MFSD9Q8NBP5 474 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 DNAJA3Q96EY1 480 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 DTD2Q96FN9 168 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 ZNF75AQ96N20 296 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 GLIPR2Q9H4G4 154 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 TXNRD2Q9NNW7 524 aa8.21□□□□□ -1.1
VCL-206ENST00000623461 LYRM2Q9NU23 88 aaPredicted RBP8.21□□□□□ -1.1
VCL-206ENST00000623461 GDF2Q9UK05 429 aaPredicted RBP8.21□□□□□ -1.1
VCL-206ENST00000623461 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.2□□□□□ -1.1
VCL-206ENST00000623461 LOC102725191A0A1B0GVB3 256 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 GLTPD2A6NH11 291 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 LCATP04180 440 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 ITGB8P26012 769 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 BLVRBP30043 206 aaPredicted RBP8.2□□□□□ -1.1
VCL-206ENST00000623461 TSFMP43897 325 aaKnown RBP8.2□□□□□ -1.1
VCL-206ENST00000623461 NPY4RP50391 375 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 REEP5Q00765 189 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 FAM162BQ5T6X4 162 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 RHOUQ7L0Q8 258 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 OR2W3Q7Z3T1 314 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 CHST14Q8NCH0 376 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 OR1F2PQ96R84 312 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 KCNG2Q9UJ96 466 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 IGLON5A6NGN9 336 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 ZFP92A6NM28 416 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 CEBPZOSA8MTT3 80 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 KDM4EB2RXH2 506 aaPredicted RBP8.2□□□□□ -1.1
VCL-206ENST00000623461 XRCC3O43542 346 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 LCN6P62502 163 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 PAQR9Q6ZVX9 377 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 OR10D4PQ8NGN7 298 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 MARVELD3Q96A59 401 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 NKX3-1Q99801 234 aaPredicted RBP8.2□□□□□ -1.1
VCL-206ENST00000623461 GPR62Q9BZJ7 368 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 IKZF5Q9H5V7 419 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 HINT3Q9NQE9 182 aaKnown RBP8.2□□□□□ -1.1
VCL-206ENST00000623461 SDK1Q7Z5N4 2213 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 SEC14L6B5MCN3 397 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 GPR75O95800 540 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 RPA2P15927 270 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 ITGB7P26010 798 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 CHRNB4P30926 498 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 PCBP4P57723 403 aaKnown RBP8.2□□□□□ -1.1
VCL-206ENST00000623461 LINC00303Q3SY05 128 aa8.2□□□□□ -1.1
VCL-206ENST00000623461 DAZAP1Q96EP5 407 aaKnown RBP8.2□□□□□ -1.1
VCL-206ENST00000623461 GPR137Q96N19 417 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms