RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 ASB18Q6ZVZ8 466 aa14.65□□□□□ -0.06
LDB3-208ENST00000623007 GLB1L2Q8IW92 636 aa14.65□□□□□ -0.06
LDB3-208ENST00000623007 RFLNBQ8N5W9 214 aa14.65□□□□□ -0.06
LDB3-208ENST00000623007 POC5Q8NA72 575 aa14.65□□□□□ -0.06
LDB3-208ENST00000623007 DCLRE1CQ96SD1 692 aaKnown RBP14.65□□□□□ -0.06
LDB3-208ENST00000623007 SRRQ9GZT4 340 aa14.65□□□□□ -0.06
LDB3-208ENST00000623007 COMMD3Q9UBI1 195 aa14.65□□□□□ -0.06
LDB3-208ENST00000623007 GRIP1Q9Y3R0 1128 aa14.65□□□□□ -0.06
LDB3-208ENST00000623007 TVP23AA6NH52 213 aa14.65□□□□□ -0.06
LDB3-208ENST00000623007 TERTO14746 1132 aaKnown RBP14.65□□□□□ -0.06
LDB3-208ENST00000623007 LRRTM2O43300 516 aa14.65□□□□□ -0.06
LDB3-208ENST00000623007 EFNA2O43921 213 aa14.65□□□□□ -0.06
LDB3-208ENST00000623007 SHC1P29353 583 aa14.65□□□□□ -0.06
LDB3-208ENST00000623007 DCTDP32321 178 aa14.65□□□□□ -0.06
LDB3-208ENST00000623007 EVX1P49640 407 aa14.65□□□□□ -0.06
LDB3-208ENST00000623007 SCAND1P57086 179 aa14.65□□□□□ -0.06
LDB3-208ENST00000623007 IFITM3Q01628 133 aa14.65□□□□□ -0.06
LDB3-208ENST00000623007 AIMP2Q13155 320 aaKnown RBP14.65□□□□□ -0.06
LDB3-208ENST00000623007 SLC17A1Q14916 467 aa14.65□□□□□ -0.06
LDB3-208ENST00000623007 TMEM176BQ3YBM2 270 aaPredicted RBP14.65□□□□□ -0.06
LDB3-208ENST00000623007 IDNKQ5T6J7 187 aa14.65□□□□□ -0.06
LDB3-208ENST00000623007 SLC26A10Q8NG04 563 aa14.65□□□□□ -0.06
LDB3-208ENST00000623007 OR10H5Q8NGA6 315 aa14.65□□□□□ -0.06
LDB3-208ENST00000623007 GPR148Q8TDV2 347 aa14.65□□□□□ -0.06
LDB3-208ENST00000623007 RNF128Q8TEB7 428 aa14.65□□□□□ -0.06
LDB3-208ENST00000623007 SMAP2Q8WU79 429 aaPredicted RBP14.65□□□□□ -0.06
LDB3-208ENST00000623007 PNPLA2Q96AD5 504 aa14.65□□□□□ -0.06
LDB3-208ENST00000623007 INTS12Q96CB8 462 aaKnown RBP14.65□□□□□ -0.06
LDB3-208ENST00000623007 MRPL13Q9BYD1 178 aaKnown RBP14.65□□□□□ -0.06
LDB3-208ENST00000623007 RNF32Q9H0A6 362 aa14.65□□□□□ -0.06
LDB3-208ENST00000623007 MIXL1Q9H2W2 232 aa14.65□□□□□ -0.06
LDB3-208ENST00000623007 BOKQ9UMX3 212 aaPredicted RBP14.65□□□□□ -0.06
LDB3-208ENST00000623007 ZNF726A6NNF4 738 aa14.64□□□□□ -0.07
LDB3-208ENST00000623007 ZFPL1O95159 310 aa14.64□□□□□ -0.07
LDB3-208ENST00000623007 SPARCP09486 303 aa14.64□□□□□ -0.07
LDB3-208ENST00000623007 OR8G3PP0DMU2 310 aa14.64□□□□□ -0.07
LDB3-208ENST00000623007 RBMS1P29558 406 aaKnown RBP14.64□□□□□ -0.07
LDB3-208ENST00000623007 BIDP55957 195 aa14.64□□□□□ -0.07
LDB3-208ENST00000623007 CLRN1P58418 232 aa14.64□□□□□ -0.07
LDB3-208ENST00000623007 RPS11P62280 158 aaKnown RBP eCLIP14.64□□□□□ -0.07
LDB3-208ENST00000623007 MELKQ14680 651 aa14.64□□□□□ -0.07
LDB3-208ENST00000623007 ABHD17BQ5VST6 288 aa14.64□□□□□ -0.07
LDB3-208ENST00000623007 HACD4Q5VWC8 232 aa14.64□□□□□ -0.07
LDB3-208ENST00000623007 RAET1LQ5VY80 246 aa14.64□□□□□ -0.07
LDB3-208ENST00000623007 DHRS13Q6UX07 377 aa14.64□□□□□ -0.07
LDB3-208ENST00000623007 KRT77Q7Z794 578 aa14.64□□□□□ -0.07
LDB3-208ENST00000623007 SLC22A16Q86VW1 577 aa14.64□□□□□ -0.07
LDB3-208ENST00000623007 OR8H2Q8N162 312 aa14.64□□□□□ -0.07
LDB3-208ENST00000623007 NOXO1Q8NFA2 376 aa14.64□□□□□ -0.07
LDB3-208ENST00000623007 OR2G2Q8NGZ5 317 aa14.64□□□□□ -0.07
LDB3-208ENST00000623007 OR52N5Q8NH56 324 aa14.64□□□□□ -0.07
LDB3-208ENST00000623007 ABTB1Q969K4 478 aaPredicted RBP14.64□□□□□ -0.07
LDB3-208ENST00000623007 SF3B5Q9BWJ5 86 aaKnown RBP14.64□□□□□ -0.07
LDB3-208ENST00000623007 PROK2Q9HC23 129 aa14.64□□□□□ -0.07
LDB3-208ENST00000623007 FOXJ2Q9P0K8 574 aa14.64□□□□□ -0.07
LDB3-208ENST00000623007 B3GAT1Q9P2W7 334 aa14.64□□□□□ -0.07
LDB3-208ENST00000623007 PCNX3Q9H6A9 2034 aa14.64□□□□□ -0.07
LDB3-208ENST00000623007 GPR171O14626 319 aa14.63□□□□□ -0.07
LDB3-208ENST00000623007 TNFSF15O95150 251 aa14.63□□□□□ -0.07
LDB3-208ENST00000623007 WISP1O95388 367 aa14.63□□□□□ -0.07
LDB3-208ENST00000623007 SRMP19623 302 aa14.63□□□□□ -0.07
LDB3-208ENST00000623007 CNR1P21554 472 aa14.63□□□□□ -0.07
LDB3-208ENST00000623007 RPS18P62269 152 aaKnown RBP14.63□□□□□ -0.07
LDB3-208ENST00000623007 H3F3AP84243 136 aa14.63□□□□□ -0.07
LDB3-208ENST00000623007 LRRN1Q6UXK5 716 aa14.63□□□□□ -0.07
LDB3-208ENST00000623007 NPAS1Q99742 590 aa14.63□□□□□ -0.07
LDB3-208ENST00000623007 SOSTQ9BQB4 213 aa14.63□□□□□ -0.07
LDB3-208ENST00000623007 NIPAL2Q9H841 368 aa14.63□□□□□ -0.07
LDB3-208ENST00000623007 TCF7L1Q9HCS4 588 aa14.63□□□□□ -0.07
LDB3-208ENST00000623007 MRPL22Q9NWU5 206 aaKnown RBP14.63□□□□□ -0.07
LDB3-208ENST00000623007 B4GALT7Q9UBV7 327 aa14.63□□□□□ -0.07
LDB3-208ENST00000623007 COA3Q9Y2R0 106 aaPredicted RBP14.63□□□□□ -0.07
LDB3-208ENST00000623007 TRBV5-5A0A0J9YX44 114 aa14.62□□□□□ -0.07
LDB3-208ENST00000623007 SHISA3A0PJX4 238 aa14.62□□□□□ -0.07
LDB3-208ENST00000623007 ZIC3O60481 467 aa14.62□□□□□ -0.07
LDB3-208ENST00000623007 LAP3P28838 519 aa14.62□□□□□ -0.07
LDB3-208ENST00000623007 PSMB10P40306 273 aa14.62□□□□□ -0.07
LDB3-208ENST00000623007 GUCA1AP43080 201 aaPredicted RBP14.62□□□□□ -0.07
LDB3-208ENST00000623007 NR4A2P43354 598 aa14.62□□□□□ -0.07
LDB3-208ENST00000623007 P2RY4P51582 365 aa14.62□□□□□ -0.07
LDB3-208ENST00000623007 PITPNAQ00169 270 aa14.62□□□□□ -0.07
LDB3-208ENST00000623007 EIF2B1Q14232 305 aaKnown RBP14.62□□□□□ -0.07
LDB3-208ENST00000623007 MEP1BQ16820 701 aa14.62□□□□□ -0.07
LDB3-208ENST00000623007 LYPD4Q6UWN0 246 aa14.62□□□□□ -0.07
LDB3-208ENST00000623007 NHLRC1Q6VVB1 395 aa14.62□□□□□ -0.07
LDB3-208ENST00000623007 TMPRSS12Q86WS5 348 aa14.62□□□□□ -0.07
LDB3-208ENST00000623007 ZNF676Q8N7Q3 588 aa14.62□□□□□ -0.07
LDB3-208ENST00000623007 THOC3Q96J01 351 aaKnown RBP14.62□□□□□ -0.07
LDB3-208ENST00000623007 OR14A2Q96R54 314 aa14.62□□□□□ -0.07
LDB3-208ENST00000623007 PDCD1LG2Q9BQ51 273 aa14.62□□□□□ -0.07
LDB3-208ENST00000623007 TTTY10Q9BZA0 68 aa14.62□□□□□ -0.07
LDB3-208ENST00000623007 ELOVL3Q9HB03 270 aa14.62□□□□□ -0.07
LDB3-208ENST00000623007 CYSLTR2Q9NS75 346 aa14.62□□□□□ -0.07
LDB3-208ENST00000623007 STMN3Q9NZ72 180 aa14.62□□□□□ -0.07
LDB3-208ENST00000623007 FRRS1LQ9P0K9 344 aa14.62□□□□□ -0.07
LDB3-208ENST00000623007 OR2M5A3KFT3 312 aa14.61□□□□□ -0.07
LDB3-208ENST00000623007 OR4C45A6NMZ5 311 aa14.61□□□□□ -0.07
LDB3-208ENST00000623007 FAM25AB3EWG3 89 aa14.61□□□□□ -0.07
LDB3-208ENST00000623007 FAM25CB3EWG5 89 aa14.61□□□□□ -0.07
LDB3-208ENST00000623007 FAM25GB3EWG6 89 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms