RNA–Protein interactions for RNA: ENST00000621728.4

SEMA6C-210, Transcript of semaphorin 6C, humanhuman

TSL 1 (best) BASIC

Gene SEMA6C, Length 1,918 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-210ENST00000621728 LINC00303Q3SY05 128 aa16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 LHFPL3Q86UP9 236 aa16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 SIAH3Q8IW03 269 aa16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 RFLNBQ8N5W9 214 aa16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 MEIOBQ8N635 442 aa16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 ZIC4Q8N9L1 334 aa16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 WDYHV1Q96HA8 205 aa16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 OR5M11Q96RB7 305 aa16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 ALG12Q9BV10 488 aa16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 SLIRPQ9GZT3 109 aaKnown RBP16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 DCSTAMPQ9H295 470 aa16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 CCDC59Q9P031 241 aaKnown RBP16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 LOC102725191A0A1B0GVB3 256 aa16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 A6NIZ1 184 aa16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 DNPH1O43598 174 aa16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 GLCEO94923 617 aa16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 IGHG3P01860 377 aa16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 TFP02787 698 aa16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 RAP1BP61224 184 aa16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 NCS1P62166 190 aa16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 RAP1AP62834 184 aa16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 PON3Q15166 354 aa16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 ABLIM2Q6H8Q1 611 aa16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 C19orf48Q6RUI8 117 aa16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 ZNF554Q86TJ5 538 aa16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 ABHD3Q8WU67 409 aa16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 TTTY10Q9BZA0 68 aa16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 B9D1Q9UPM9 204 aa16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 CAMK2AQ9UQM7 478 aa16.55■□□□□ 0.24
SEMA6C-210ENST00000621728 ZNF716A6NP11 495 aa16.54■□□□□ 0.24
SEMA6C-210ENST00000621728 NPIPA2E9PIF3 369 aa16.54■□□□□ 0.24
SEMA6C-210ENST00000621728 NPIPA3F8WFD2 350 aa16.54■□□□□ 0.24
SEMA6C-210ENST00000621728 SBK2P0C263 348 aa16.54■□□□□ 0.24
SEMA6C-210ENST00000621728 OCM2P0CE71 109 aa16.54■□□□□ 0.24
SEMA6C-210ENST00000621728 OCMP0CE72 109 aaPredicted RBP16.54■□□□□ 0.24
SEMA6C-210ENST00000621728 LIMS3P0CW19 117 aa16.54■□□□□ 0.24
SEMA6C-210ENST00000621728 LIMS4P0CW20 117 aa16.54■□□□□ 0.24
SEMA6C-210ENST00000621728 CD40LGP29965 261 aa16.54■□□□□ 0.24
SEMA6C-210ENST00000621728 NTF4P34130 210 aa16.54■□□□□ 0.24
SEMA6C-210ENST00000621728 PDSS1Q5T2R2 415 aa16.54■□□□□ 0.24
SEMA6C-210ENST00000621728 FCRLAQ7L513 359 aa16.54■□□□□ 0.24
SEMA6C-210ENST00000621728 CENPSQ8N2Z9 138 aa16.54■□□□□ 0.24
SEMA6C-210ENST00000621728 OR2T4Q8NH00 348 aa16.54■□□□□ 0.24
SEMA6C-210ENST00000621728 SNRNP27Q8WVK2 155 aaKnown RBP16.54■□□□□ 0.24
SEMA6C-210ENST00000621728 CPNE4Q96A23 557 aaPredicted RBP16.54■□□□□ 0.24
SEMA6C-210ENST00000621728 IGLV1-36A0A0B4J1U3 117 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 IRGMA1A4Y4 181 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 C12orf71A8MTZ7 269 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 J3QRK9 145 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 PGA4P0DJD7 388 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 PGA3P0DJD8 388 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 CENPAP49450 140 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 RGS6P49758 472 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 LGALS3BPQ08380 585 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 BCL2A1Q16548 175 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 ARMCX4Q5H9R4 360 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 OR2G6Q5TZ20 316 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 GDPGP1Q6ZNW5 385 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 MFSD4AQ8N468 514 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 OR10H4Q8NGA5 316 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 FNDC9Q8TBE3 224 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 ZNF649Q9BS31 505 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 MRPL13Q9BYD1 178 aaKnown RBP16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 NXF2Q9GZY0 626 aaKnown RBP16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 SIAEQ9HAT2 523 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 TIGARQ9NQ88 270 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 ING1Q9UK53 422 aaPredicted RBP16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 PCDHGB7Q9Y5F8 929 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 hCG_2014768A0A024R1R8 64 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 AQP8O94778 261 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 VAMP5O95183 116 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 IGHA1P01876 353 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 PSKH1P11801 424 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 HOXD11P31277 338 aaPredicted RBP16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 RPS27P42677 84 aaKnown RBP16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 LSM3P62310 102 aaKnown RBP16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 GGTLC2Q14390 218 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 POU4F3Q15319 338 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 ZNF404Q494X3 552 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 SLC35D3Q5M8T2 416 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 OR6X1Q8NH79 312 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 MCFD2Q8NI22 146 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 SNX18Q96RF0 628 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 MROQ9BYG7 248 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 HAO2Q9NYQ3 351 aa16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 LSM2Q9Y333 95 aaKnown RBP16.53■□□□□ 0.24
SEMA6C-210ENST00000621728 CYTIPO60759 359 aa16.52■□□□□ 0.23
SEMA6C-210ENST00000621728 MPZL1O95297 269 aa16.52■□□□□ 0.23
SEMA6C-210ENST00000621728 SELENOPP49908 381 aa16.52■□□□□ 0.23
SEMA6C-210ENST00000621728 CLRN1P58418 232 aa16.52■□□□□ 0.23
SEMA6C-210ENST00000621728 RASGEF1BQ0VAM2 473 aa16.52■□□□□ 0.23
SEMA6C-210ENST00000621728 PHYHD1Q5SRE7 291 aa16.52■□□□□ 0.23
SEMA6C-210ENST00000621728 LCN1P1Q5VSP4 162 aa16.52■□□□□ 0.23
SEMA6C-210ENST00000621728 FAM205BPQ63HN1 556 aa16.52■□□□□ 0.23
SEMA6C-210ENST00000621728 SSX6Q7RTT6 188 aa16.52■□□□□ 0.23
SEMA6C-210ENST00000621728 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.52■□□□□ 0.23
SEMA6C-210ENST00000621728 ZBTB46Q86UZ6 589 aa16.52■□□□□ 0.23
SEMA6C-210ENST00000621728 NANOGP1Q8N7R0 232 aa16.52■□□□□ 0.23
SEMA6C-210ENST00000621728 NOXO1Q8NFA2 376 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms