RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 FGF20Q9NP95 211 aaPredicted RBP7.57□□□□□ -1.2
PTPDC1-204ENST00000620992 TREM1Q9NP99 234 aa7.57□□□□□ -1.2
PTPDC1-204ENST00000620992 RBFOX1Q9NWB1 397 aaKnown RBP7.57□□□□□ -1.2
PTPDC1-204ENST00000620992 ZNF223Q9UK11 482 aaPredicted RBP7.57□□□□□ -1.2
PTPDC1-204ENST00000620992 KCNIP3Q9Y2W7 256 aa7.57□□□□□ -1.2
PTPDC1-204ENST00000620992 TEX51A0A1B0GUA7 166 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 TRDV1A0A1B0GX56 115 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 SERINC4A6NH21 518 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 S100A6P06703 90 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 GRPP07492 148 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 COL9A1P20849 921 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 IDH3GP51553 393 aaPredicted RBP7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 ARF1P84077 181 aaKnown RBP7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 EDDM3AQ14507 147 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 PGGHGQ32M88 737 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 TMEM52BQ4KMG9 183 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 ZNF628Q5EBL2 1059 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 AGBL4Q5VU57 503 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 CD300LDQ6UXZ3 194 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 MISPQ8IVT2 679 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 RRNAD1Q96FB5 475 aaKnown RBP7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 MSANTD3Q96H12 275 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 AICDAQ9GZX7 198 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 GALNT9Q9HCQ5 603 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 HINT3Q9NQE9 182 aaKnown RBP7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 CHD7Q9P2D1 2997 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 ING1Q9UK53 422 aaPredicted RBP7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 COL4A6Q14031 1691 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 A0A0G2JMP0 313 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 CENPBD1B2RD01 187 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 EDDM3BP56851 147 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 ACTC1P68032 377 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 ACTA1P68133 377 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 ACSM3Q53FZ2 586 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 FAM27D1Q5T7N8 215 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 PLCXD3Q63HM9 321 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 UNQ6126/PRO20091Q6UXV3 157 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 SLC35F2Q8IXU6 374 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 ACBD4Q8NC06 268 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 OR4M2Q8NGB6 313 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 GCDHQ92947 438 aaPredicted RBP7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 MIB2Q96AX9 1013 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 ATF6BQ99941 703 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 APMAPQ9HDC9 416 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 PFDN2Q9UHV9 154 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 DAPP1Q9UN19 280 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 SF3B6Q9Y3B4 125 aaKnown RBP7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 TMED7-TICAM2A0A0A6YYA0 188 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 SHISA3A0PJX4 238 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 TSPAN4O14817 238 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 BET1O15155 118 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 CTNSO60931 367 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 PIAS2O75928 621 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 GUSBP08236 651 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 CHRNB1P11230 501 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 ICAM2P13598 275 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 PRPS1P60891 318 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 TRA2BP62995 288 aaKnown RBP7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 ZNF468Q5VIY5 522 aaPredicted RBP7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 PRSS41Q7RTY9 318 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 GDF7Q7Z4P5 450 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 BEST3Q8N1M1 668 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 SIMC1Q8NDZ2 872 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 GRPEL2Q8TAA5 225 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 H1FXQ92522 213 aaKnown RBP7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 ZNF707Q96C28 371 aaPredicted RBP7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 SDSLQ96GA7 329 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 COX14Q96I36 57 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 C1QTNF2Q9BXJ5 285 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 PRDM9Q9NQV7 894 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 B3GNT2Q9NY97 397 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 KCNIP1Q9NZI2 227 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 SLC35A3Q9Y2D2 325 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 TMED7Q9Y3B3 224 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 ADAM18Q9Y3Q7 739 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 ASB4Q9Y574 426 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 MTCL1Q9Y4B5 1905 aaKnown RBP7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 ZNF462Q96JM2 2506 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 LRRK1Q38SD2 2015 aa7.56□□□□□ -1.2
PTPDC1-204ENST00000620992 METTL12A8MUP2 240 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 F5H0A9 414 aaPredicted RBP7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 P2RY10O00398 339 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 ZNF593O00488 134 aaPredicted RBP7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 SURF4O15260 269 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 MBTPS2O43462 519 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 AKR7A2O43488 359 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 IGHG1P01857 330 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 SDHBP21912 280 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 CRABP1P29762 137 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 RRADP55042 308 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 FAPQ12884 760 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 GPR157Q5UAW9 335 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 RNLSQ5VYX0 342 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 WBP2NLQ6ICG8 309 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 SLC48A1Q6P1K1 146 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 C6orf15Q6UXA7 325 aaPredicted RBP7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 ZADH2Q8N4Q0 377 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 DNAJC5GQ8N7S2 189 aa7.55□□□□□ -1.2
PTPDC1-204ENST00000620992 OR11G2Q8NGC1 345 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms