RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 SURF4O15260 269 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 ZSCAN12O43309 604 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 CHEK2O96017 543 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 MT-ATP6P00846 226 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 IGHV1-69P01742 117 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 SFTPBP07988 381 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 LAMP1P11279 417 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 PAFAH1B1P43034 410 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 UGT3A2Q3SY77 523 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 GPR157Q5UAW9 335 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 ANKRD26P1Q6NSI1 321 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 RPS27LQ71UM5 84 aaKnown RBP3.81□□□□□ -1.8
SNCA-213ENST00000618500 IGFN1Q86VF2 1251 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 UEVLDQ8IX04 471 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 KLHL7Q8IXQ5 586 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 GATAD2BQ8WXI9 593 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 CCDC115Q96NT0 180 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 ARMC7Q9H6L4 198 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 PPCSQ9HAB8 311 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 RAB18Q9NP72 206 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 TMEM216Q9P0N5 145 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 SH3BP4Q9P0V3 963 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 ZNRD1Q9P1U0 126 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 CAB39Q9Y376 341 aaPredicted RBP3.81□□□□□ -1.8
SNCA-213ENST00000618500 UTP11Q9Y3A2 253 aaKnown RBP3.81□□□□□ -1.8
SNCA-213ENST00000618500 GMEB1Q9Y692 573 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 TRAV40A0A0B4J280 105 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 LCE6AA0A183 80 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 K7EIL1 84 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 GLRA3O75311 464 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 PIAS1O75925 651 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 ECDO95905 644 aaPredicted RBP3.81□□□□□ -1.8
SNCA-213ENST00000618500 CLPTM1O96005 669 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 HLA-HP01893 362 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 BGLAPP02818 100 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 VSIG8P0DPA2 414 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 ARHGDIAP52565 204 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 HBA1P69905 142 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 HPCAP84074 193 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 EMX1Q04741 257 aaPredicted RBP3.81□□□□□ -1.8
SNCA-213ENST00000618500 EGR4Q05215 589 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 SRSF4Q08170 494 aaKnown RBP3.81□□□□□ -1.8
SNCA-213ENST00000618500 NPRL3Q12980 569 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 ZMYND11Q15326 602 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 ATP6AP1LQ52LC2 224 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 DHRS7BQ6IAN0 325 aaPredicted RBP3.81□□□□□ -1.8
SNCA-213ENST00000618500 DCDC5Q6ZRR9 648 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 SYT9Q86SS6 491 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 C1QL4Q86Z23 238 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 OR4F17Q8NGA8 305 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 OR5D16Q8NGK9 328 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 EPS8L3Q8TE67 593 aaKnown RBP3.81□□□□□ -1.8
SNCA-213ENST00000618500 MZB1Q8WU39 189 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 RCC1LQ96I51 464 aaKnown RBP3.81□□□□□ -1.8
SNCA-213ENST00000618500 OR4F4Q96R69 305 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 NUDT16L1Q9BRJ7 211 aaKnown RBP3.81□□□□□ -1.8
SNCA-213ENST00000618500 DUSP26Q9BV47 211 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 KRTAP4-8Q9BYQ9 185 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 TUBB1Q9H4B7 451 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 EMCNQ9ULC0 261 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 IFT52Q9Y366 437 aa3.81□□□□□ -1.8
SNCA-213ENST00000618500 A0A087WUV0 522 aaPredicted RBP3.8□□□□□ -1.8
SNCA-213ENST00000618500 IQCMA0A1B0GVH7 501 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 ZSCAN5BA6NJL1 495 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 CEACAM18A8MTB9 384 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 MS4A18H0YCH9 400 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 HMGN4O00479 90 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 SCN2BO60939 215 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 PTBP3O95758 552 aaKnown RBP3.8□□□□□ -1.8
SNCA-213ENST00000618500 PROCP04070 461 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 TSPAN19P0C672 248 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 MYL2P10916 166 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 CD79AP11912 226 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 MAKP20794 623 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 RPL38P63173 70 aaKnown RBP3.8□□□□□ -1.8
SNCA-213ENST00000618500 CCL8P80075 99 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 RAB39AQ14964 217 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 MS4A18Q3C1V0 323 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 RFTN2Q52LD8 501 aaPredicted RBP3.8□□□□□ -1.8
SNCA-213ENST00000618500 TMEM255AQ5JRV8 349 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 TEX35Q5T0J7 233 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 MRPL2Q5T653 305 aaKnown RBP3.8□□□□□ -1.8
SNCA-213ENST00000618500 CRIP3Q6Q6R5 217 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 ZNF841Q6ZN19 808 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 ZNF836Q6ZNA1 936 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 MSANTD1Q6ZTZ1 278 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 SKA3Q8IX90 412 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 KIRREL3Q8IZU9 778 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 OR7A2PQ8NGA2 310 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 OR8B3Q8NGG8 313 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 CDC26Q8NHZ8 85 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 DNAJA4Q8WW22 397 aaPredicted RBP3.8□□□□□ -1.8
SNCA-213ENST00000618500 POM121L2Q96KW2 1035 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 OR8B2Q96RD0 313 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 DCLRE1CQ96SD1 692 aaKnown RBP3.8□□□□□ -1.8
SNCA-213ENST00000618500 EPYCQ99645 322 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 ULBP2Q9BZM5 246 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 NANOGQ9H9S0 305 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 ELOVL3Q9HB03 270 aa3.8□□□□□ -1.8
SNCA-213ENST00000618500 SLCO1B3Q9NPD5 702 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms