RNA–Protein interactions for RNA: ENST00000618166.4

SCAMP1-206, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 2 BASIC

Gene SCAMP1, Length 1,358 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-206ENST00000618166 POPDC3Q9HBV1 291 aa5.5□□□□□ -1.53
SCAMP1-206ENST00000618166 SMURF1Q9HCE7 757 aa5.5□□□□□ -1.53
SCAMP1-206ENST00000618166 PPP1R3CQ9UQK1 317 aa5.5□□□□□ -1.53
SCAMP1-206ENST00000618166 TMED7Q9Y3B3 224 aa5.5□□□□□ -1.53
SCAMP1-206ENST00000618166 TSSC4Q9Y5U2 329 aaPredicted RBP5.5□□□□□ -1.53
SCAMP1-206ENST00000618166 GPR45Q9Y5Y3 372 aa5.5□□□□□ -1.53
SCAMP1-206ENST00000618166 MEIOCA2RUB1 952 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 NOTOA8MTQ0 251 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 PPP6CO00743 305 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 SCN2BO60939 215 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 LY86O95711 162 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 ATP6V1C1P21283 382 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 NTSP30990 170 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 CRHR1P34998 444 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 CRATP43155 626 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 CLK1P49759 484 aaKnown RBP5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 ETF1P62495 437 aaKnown RBP5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 C2orf80Q0P641 193 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 MFSD13AQ14CX5 517 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 CHI3L2Q15782 390 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 MOGQ16653 247 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 DCST2Q5T1A1 773 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 ANKRD26P1Q6NSI1 321 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 EMBQ6PCB8 327 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 DRICH1Q6PGQ1 229 aaPredicted RBP5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 Q6ZR03 302 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 NLRC3Q7RTR2 1065 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 GRINAQ7Z429 371 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 SKA3Q8IX90 412 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 SLC25A40Q8TBP6 338 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 SELENOMQ8WWX9 145 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 ATP6V1E2Q96A05 226 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 CIDECQ96AQ7 238 aaPredicted RBP5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 DDIT4LQ96D03 193 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 SAMD8Q96LT4 415 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 MS4A4EQ96PG1 132 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 DUX3Q96PT4 197 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 OR2M2Q96R28 347 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 ELOVL6Q9H5J4 265 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 CDH20Q9HBT6 801 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 C20orf141Q9NUB4 165 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 ZMAT5Q9UDW3 170 aaKnown RBP5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 OSGIN1Q9UJX0 560 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 ZDHHC8Q9ULC8 765 aa5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 ZNF256Q9Y2P7 627 aaPredicted RBP5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 CAB39Q9Y376 341 aaPredicted RBP5.49□□□□□ -1.53
SCAMP1-206ENST00000618166 HMCN2Q8NDA2 5059 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 AP3D1O14617 1153 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 ANKRD28O15084 1053 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 OR10H3O60404 316 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 MFAP3LO75121 409 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 URI1O94763 535 aaPredicted RBP5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 CSTAP01040 98 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 GPIP06744 558 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 EFNA1P20827 205 aaPredicted RBP5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 STX2P32856 288 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 WNT5AP41221 380 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 ACAA2P42765 397 aaKnown RBP5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 HTR5AP47898 357 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 THBS3P49746 956 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 CCNG1P51959 295 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 IL5RAQ01344 420 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 SEL1L2Q5TEA6 688 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 HMGN2P46Q86SG4 172 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 TMEM123Q8N131 208 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 FGFRL1Q8N441 504 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 NAT8LQ8N9F0 302 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 BEND2Q8NDZ0 799 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 OR2Z1Q8NG97 314 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 OR4F6Q8NGB9 312 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 STAG3L4Q8TBR4 150 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 PIFOQ8TCI5 191 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 KLF14Q8TD94 323 aaPredicted RBP5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 MZB1Q8WU39 189 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 HES6Q96HZ4 224 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 AJUBAQ96IF1 538 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 LYZL4Q96KX0 146 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 OSBPL9Q96SU4 736 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 ASPNQ9BXN1 380 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 BCL2L14Q9BZR8 327 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 OR2J1Q9GZK6 312 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 HOXD1Q9GZZ0 328 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 PIF1Q9H611 641 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 RMND5AQ9H871 391 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 TCF7L2Q9NQB0 619 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 IFNKQ9P0W0 207 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 VPS29Q9UBQ0 182 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 SCOCQ9UIL1 159 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 PCDHGB4Q9UN71 923 aa5.48□□□□□ -1.53
SCAMP1-206ENST00000618166 RNF213Q63HN8 5207 aa5.47□□□□□ -1.53
SCAMP1-206ENST00000618166 TRBV23-1A0A0A0MS06 115 aa5.47□□□□□ -1.53
SCAMP1-206ENST00000618166 SMTNL1A8MU46 457 aa5.47□□□□□ -1.53
SCAMP1-206ENST00000618166 MIF4GDA9UHW6 222 aaKnown RBP5.47□□□□□ -1.53
SCAMP1-206ENST00000618166 UBL3O95164 117 aa5.47□□□□□ -1.53
SCAMP1-206ENST00000618166 KRT14P02533 472 aa5.47□□□□□ -1.53
SCAMP1-206ENST00000618166 HCKP08631 526 aa5.47□□□□□ -1.53
SCAMP1-206ENST00000618166 GFAPP14136 432 aa5.47□□□□□ -1.53
SCAMP1-206ENST00000618166 TSPAN8P19075 237 aa5.47□□□□□ -1.53
SCAMP1-206ENST00000618166 ELK3P41970 407 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms