RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 RAC1P63000 192 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 CLEC12BQ2HXU8 276 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 TCTN3Q6NUS6 607 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 RPUSD3Q6P087 351 aaKnown RBP6.78□□□□□ -1.32
PDE6A-205ENST00000617647 METTL7BQ6UX53 244 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 TMPPEQ6ZT21 453 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 C19orf47Q8N9M1 422 aaKnown RBP6.78□□□□□ -1.32
PDE6A-205ENST00000617647 PCED1BQ96HM7 432 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 LCORQ96JN0 433 aaPredicted RBP6.78□□□□□ -1.32
PDE6A-205ENST00000617647 CABLES2Q9BTV7 478 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 MRIQ9BWK5 157 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 ZMAT3Q9HA38 289 aaKnown RBP6.78□□□□□ -1.32
PDE6A-205ENST00000617647 TESQ9UGI8 421 aaKnown RBP6.78□□□□□ -1.32
PDE6A-205ENST00000617647 GPR55Q9Y2T6 319 aaPredicted RBP6.78□□□□□ -1.32
PDE6A-205ENST00000617647 LRRC37AA6NMS7 1700 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 ARRDC5A6NEK1 342 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 CASTOR2A6NHX0 329 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 RNASET2O00584 256 aaKnown RBP6.78□□□□□ -1.32
PDE6A-205ENST00000617647 P2RX6O15547 441 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 KLK8O60259 260 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 IGHV2-5P01817 119 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 CKMP06732 381 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 CTSLP07711 333 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 ST6GAL1P15907 406 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 ZNF16P17020 682 aaPredicted RBP6.78□□□□□ -1.32
PDE6A-205ENST00000617647 MSR1P21757 451 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 HAGHQ16775 308 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 ATP6V1FQ16864 119 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 VWA2Q5GFL6 755 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 LDLRAD1Q5T700 205 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 CD200R1LQ6Q8B3 271 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 SBSNQ6UWP8 590 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 SIRT6Q8N6T7 355 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 NEIL2Q969S2 332 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 INSM2Q96T92 566 aaPredicted RBP6.78□□□□□ -1.32
PDE6A-205ENST00000617647 SLC35B3Q9H1N7 401 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 SLCO5A1Q9H2Y9 848 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.78□□□□□ -1.32
PDE6A-205ENST00000617647 HS3ST4Q9Y661 456 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 TRAV34A0A0B4J273 112 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 G3V3Q6 166 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 PIRO00625 290 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 TGM5O43548 720 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 CNMDO75829 334 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 HLA-DQA2P01906 255 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 TRGC1P0CF51 173 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 CTHP32929 405 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 SNCAP37840 140 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 ADCYAP1R1P41586 468 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 MC3RP41968 323 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 OR3A2P47893 321 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 ID4P47928 161 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 DHRS2Q13268 280 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 SSPNQ14714 243 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 RIPPLY2Q5TAB7 128 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 GPRIN1Q7Z2K8 1008 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 OR4A4PQ8NGN8 299 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 OR6N1Q8NGY5 312 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 SCAMP5Q8TAC9 235 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 KCTD13Q8WZ19 329 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 PCYT2Q99447 389 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 MCHR1Q99705 422 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 BOCQ9BWV1 1114 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 LMAN1LQ9HAT1 526 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 PATZ1Q9HBE1 687 aaKnown RBP6.78□□□□□ -1.32
PDE6A-205ENST00000617647 HINT3Q9NQE9 182 aaKnown RBP6.78□□□□□ -1.32
PDE6A-205ENST00000617647 PITPNC1Q9UKF7 332 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 C14orf166Q9Y224 244 aaKnown RBP6.78□□□□□ -1.32
PDE6A-205ENST00000617647 COLEC10Q9Y6Z7 277 aa6.78□□□□□ -1.32
PDE6A-205ENST00000617647 AQP7P3A6NL99 342 aa6.77□□□□□ -1.33
PDE6A-205ENST00000617647 IFITM5A6NNB3 132 aa6.77□□□□□ -1.33
PDE6A-205ENST00000617647 RCBTB2O95199 551 aa6.77□□□□□ -1.33
PDE6A-205ENST00000617647 C22orf31O95567 290 aa6.77□□□□□ -1.33
PDE6A-205ENST00000617647 SEMG1P04279 462 aa6.77□□□□□ -1.33
PDE6A-205ENST00000617647 MAKP20794 623 aa6.77□□□□□ -1.33
PDE6A-205ENST00000617647 FRKP42685 505 aaPredicted RBP6.77□□□□□ -1.33
PDE6A-205ENST00000617647 ACSM1Q08AH1 577 aa6.77□□□□□ -1.33
PDE6A-205ENST00000617647 ZNF836Q6ZNA1 936 aa6.77□□□□□ -1.33
PDE6A-205ENST00000617647 SLC35D2Q76EJ3 337 aa6.77□□□□□ -1.33
PDE6A-205ENST00000617647 AMER3Q8N944 861 aa6.77□□□□□ -1.33
PDE6A-205ENST00000617647 OR8U1Q8NH10 309 aa6.77□□□□□ -1.33
PDE6A-205ENST00000617647 SLC38A5Q8WUX1 472 aa6.77□□□□□ -1.33
PDE6A-205ENST00000617647 SERINC2Q96SA4 455 aa6.77□□□□□ -1.33
PDE6A-205ENST00000617647 CDCA3Q99618 268 aaPredicted RBP6.77□□□□□ -1.33
PDE6A-205ENST00000617647 PRRT1Q99946 306 aa6.77□□□□□ -1.33
PDE6A-205ENST00000617647 SNHG12Q9BXW3 62 aa6.77□□□□□ -1.33
PDE6A-205ENST00000617647 WDR13Q9H1Z4 485 aa6.77□□□□□ -1.33
PDE6A-205ENST00000617647 MYOZ1Q9NP98 299 aaPredicted RBP6.77□□□□□ -1.33
PDE6A-205ENST00000617647 USP36Q9P275 1121 aaKnown RBP6.77□□□□□ -1.33
PDE6A-205ENST00000617647 A0A0U1RQF3 1178 aa6.77□□□□□ -1.33
PDE6A-205ENST00000617647 GFYI3L273 518 aa6.77□□□□□ -1.33
PDE6A-205ENST00000617647 NDUFS8O00217 210 aa6.77□□□□□ -1.33
PDE6A-205ENST00000617647 CTDSPLO15194 276 aa6.77□□□□□ -1.33
PDE6A-205ENST00000617647 PAPLNO95428 1278 aa6.77□□□□□ -1.33
PDE6A-205ENST00000617647 AKT2P31751 481 aa6.77□□□□□ -1.33
PDE6A-205ENST00000617647 RAB7AP51149 207 aa6.77□□□□□ -1.33
PDE6A-205ENST00000617647 SGSHP51688 502 aa6.77□□□□□ -1.33
PDE6A-205ENST00000617647 DCDP81605 110 aaKnown RBP6.77□□□□□ -1.33
PDE6A-205ENST00000617647 AMZ1Q400G9 498 aa6.77□□□□□ -1.33
PDE6A-205ENST00000617647 ZNF343Q6P1L6 599 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms