RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 LOC100130705A0A1B0GUX0 176 aa13.72□□□□□ -0.21
PCDHGC3-204ENST00000617222 ZNF99A8MXY4 864 aaPredicted RBP13.72□□□□□ -0.21
PCDHGC3-204ENST00000617222 E9PQ18 207 aa13.72□□□□□ -0.21
PCDHGC3-204ENST00000617222 M0R129 80 aa13.72□□□□□ -0.21
PCDHGC3-204ENST00000617222 PRKYO43930 277 aa13.72□□□□□ -0.21
PCDHGC3-204ENST00000617222 KHDRBS3O75525 346 aaKnown RBP13.72□□□□□ -0.21
PCDHGC3-204ENST00000617222 RAD51DO75771 328 aa13.72□□□□□ -0.21
PCDHGC3-204ENST00000617222 SEC14L2O76054 403 aa13.72□□□□□ -0.21
PCDHGC3-204ENST00000617222 PSMB1P20618 241 aaKnown RBP13.72□□□□□ -0.21
PCDHGC3-204ENST00000617222 CRABP1P29762 137 aa13.72□□□□□ -0.21
PCDHGC3-204ENST00000617222 UGT2B10P36537 528 aa13.72□□□□□ -0.21
PCDHGC3-204ENST00000617222 CENPAP49450 140 aa13.72□□□□□ -0.21
PCDHGC3-204ENST00000617222 ZNF84P51523 738 aa13.72□□□□□ -0.21
PCDHGC3-204ENST00000617222 TGFBR3Q03167 851 aa13.72□□□□□ -0.21
PCDHGC3-204ENST00000617222 SNTB1Q13884 538 aaKnown RBP13.72□□□□□ -0.21
PCDHGC3-204ENST00000617222 GABRA6Q16445 453 aa13.72□□□□□ -0.21
PCDHGC3-204ENST00000617222 C10orf128Q5T292 105 aa13.72□□□□□ -0.21
PCDHGC3-204ENST00000617222 OR6V1Q8N148 313 aa13.72□□□□□ -0.21
PCDHGC3-204ENST00000617222 ZNF555Q8NEP9 628 aa13.72□□□□□ -0.21
PCDHGC3-204ENST00000617222 OR9Q1Q8NGQ5 310 aa13.72□□□□□ -0.21
PCDHGC3-204ENST00000617222 OR1K1Q8NGR3 316 aa13.72□□□□□ -0.21
PCDHGC3-204ENST00000617222 HRASLS5Q96KN8 279 aa13.72□□□□□ -0.21
PCDHGC3-204ENST00000617222 FOXB1Q99853 325 aa13.72□□□□□ -0.21
PCDHGC3-204ENST00000617222 PRRG3Q9BZD7 231 aa13.72□□□□□ -0.21
PCDHGC3-204ENST00000617222 VCX3BQ9H321 246 aa13.72□□□□□ -0.21
PCDHGC3-204ENST00000617222 MED20Q9H944 212 aa13.72□□□□□ -0.21
PCDHGC3-204ENST00000617222 COA3Q9Y2R0 106 aaPredicted RBP13.72□□□□□ -0.21
PCDHGC3-204ENST00000617222 GMPPBQ9Y5P6 360 aa13.72□□□□□ -0.21
PCDHGC3-204ENST00000617222 A0A096LPE4 126 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 A0A1W2PPZ6 126 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 FAM183AA6NL82 134 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 FAM171A2A8MVW0 826 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 C19orf84I3L1E1 186 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 DCTN6O00399 190 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 TLX2O43763 284 aaPredicted RBP13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 CDAP32320 146 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 GGT2P36268 569 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 PCYT1AP49585 367 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 SLC25A1P53007 311 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 CDC42P60953 191 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 STK11Q15831 433 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 PLBD1Q6P4A8 553 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 DNM1P34Q6PK57 102 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 ZNF813Q6ZN06 617 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 CPOQ8IVL8 374 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 DHRSXQ8N5I4 330 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 TCEANCQ8N8B7 351 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 STEAP2Q8NFT2 490 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 CYGBQ8WWM9 190 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 HTRA1Q92743 480 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 BCL2L2Q92843 193 aaPredicted RBP13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 PTP4A1Q93096 173 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 MUS81Q96NY9 551 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 FOXN4Q96NZ1 517 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 IL4I1Q96RQ9 567 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 ACTR6Q9GZN1 396 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 SEC61A2Q9H9S3 476 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 HINT3Q9NQE9 182 aaKnown RBP13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 NPDC1Q9NQX5 325 aaPredicted RBP13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 TMEM38BQ9NVV0 291 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 NDRG4Q9ULP0 352 aaKnown RBP13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 UGT2A1Q9Y4X1 527 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 FKBP7Q9Y680 259 aa13.71□□□□□ -0.21
PCDHGC3-204ENST00000617222 SPTBN1Q01082 2364 aaKnown RBP13.71□□□□□ -0.22
PCDHGC3-204ENST00000617222 A0A1W2PPL8 197 aa13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 A1L4Q6 167 aa13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 PRR23D1E9PI22 279 aaPredicted RBP13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 SLC16A6O15403 523 aa13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 GYPBP06028 91 aa13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 PRR23D2P0DMB1 279 aaPredicted RBP13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 CLUP10909 449 aa13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 PAICSP22234 425 aaKnown RBP13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 CCKARP32238 428 aa13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 PYCR1P32322 319 aa13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 GUCA1AP43080 201 aaPredicted RBP13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 AQP4P55087 323 aa13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 SH3BGRP55822 239 aaPredicted RBP13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 EFNB1P98172 346 aa13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 SGCAQ16586 387 aa13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 HIKESHIQ53FT3 197 aa13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 OR7E24Q6IFN5 339 aa13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 ANKRD16Q6P6B7 361 aa13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 KLHL24Q6TFL4 600 aa13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 CXXC5Q7LFL8 322 aaKnown RBP13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 ZBTB46Q86UZ6 589 aa13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 PROKR2Q8NFJ6 384 aa13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 OR51L1Q8NGJ5 315 aa13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 OR2T4Q8NH00 348 aa13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 FAM81AQ8TBF8 368 aa13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 UBE2FQ969M7 185 aa13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 S100PBPQ96BU1 408 aa13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 PITX2Q99697 317 aa13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 HCAR1Q9BXC0 346 aa13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 NMNAT2Q9BZQ4 307 aa13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 OR51V1Q9H2C8 321 aa13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 KLF2Q9Y5W3 355 aaPredicted RBP13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 UBR5O95071 2799 aaPredicted RBP13.7□□□□□ -0.22
PCDHGC3-204ENST00000617222 USP9XQ93008 2570 aaPredicted RBP13.69□□□□□ -0.22
PCDHGC3-204ENST00000617222 IGLV1-36A0A0B4J1U3 117 aa13.69□□□□□ -0.22
PCDHGC3-204ENST00000617222 PRSS44E7EML9 344 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms