RNA–Protein interactions for RNA: ENST00000616502.4

EPHB4-210, Transcript of EPH receptor B4, humanhuman

TSL 5 BASIC

Gene EPHB4, Length 3,737 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-210ENST00000616502 SPI1P17947 270 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 RBM39Q14498 530 aaKnown RBP13.09□□□□□ -0.31
EPHB4-210ENST00000616502 Q7L0L9 218 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 CMIPQ8IY22 773 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 ZNF101Q8IZC7 436 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 ZNF485Q8NCK3 441 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 CGGBP1Q9UFW8 167 aaPredicted RBP13.09□□□□□ -0.31
EPHB4-210ENST00000616502 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.09□□□□□ -0.31
EPHB4-210ENST00000616502 TUBAL3A6NHL2 446 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 SNRPGP15A8MWD9 76 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 TNFP01375 233 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 CAPZA1P52907 286 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 ALG10Q5BKT4 473 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 KRBOX4Q5JUW0 171 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 PRAMEF8Q5VWM4 474 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 PRAMEF7Q5VXH5 474 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 FAM180AQ6UWF9 173 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 ZNF417Q8TAU3 575 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 GAL3ST3Q96A11 431 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 KLHL15Q96M94 604 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 CNTNAP3BQ96NU0 1288 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 SLCO1B1Q9Y6L6 691 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 KCNAB3O43448 404 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 GPR143P51810 404 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 DUSP8Q13202 625 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 GLT8D1Q68CQ7 371 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 OR7E24Q6IFN5 339 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 PWWP2BQ6NUJ5 590 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 C3orf33Q6P1S2 294 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 ZNF550Q7Z398 422 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 LRRTM1Q86UE6 522 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 METTL21AQ8WXB1 218 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 HAVCR1Q96D42 359 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 GAS2L1Q99501 681 aaPredicted RBP13.09□□□□□ -0.31
EPHB4-210ENST00000616502 APMAPQ9HDC9 416 aa13.09□□□□□ -0.31
EPHB4-210ENST00000616502 ZNF230Q9UIE0 474 aaPredicted RBP13.09□□□□□ -0.31
EPHB4-210ENST00000616502 TO15178 435 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 TBX19O60806 448 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 KCNJ13O60928 360 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 F12P00748 615 aaPredicted RBP13.08□□□□□ -0.32
EPHB4-210ENST00000616502 VSIG10L2P0DP72 767 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 OR1D4P47884 311 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 ALKBH1Q13686 389 aaKnown RBP13.08□□□□□ -0.32
EPHB4-210ENST00000616502 MLC1Q15049 377 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 ARHGAP11BQ3KRB8 267 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 RAB11FIP2Q7L804 512 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 OR5M9Q8NGP3 310 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 SLC37A2Q8TED4 501 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 ARL11Q969Q4 196 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 UQCC2Q9BRT2 126 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 MEPEQ9NQ76 525 aaPredicted RBP13.08□□□□□ -0.32
EPHB4-210ENST00000616502 FRYLO94915 3013 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 A0A0D9SG52 128 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 ZNF98A6NK75 572 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 DHPSP49366 369 aaPredicted RBP13.08□□□□□ -0.32
EPHB4-210ENST00000616502 H2BFSP57053 126 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 EFNB1P98172 346 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 SNTB1Q13884 538 aaKnown RBP13.08□□□□□ -0.32
EPHB4-210ENST00000616502 ULK3Q6PHR2 472 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 LRRC69Q6ZNQ3 347 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 TTLL10Q6ZVT0 673 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 PM20D2Q8IYS1 436 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 SPICQ8N5J4 248 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 TMED6Q8WW62 240 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 MRPS2Q9Y399 296 aaKnown RBP13.08□□□□□ -0.32
EPHB4-210ENST00000616502 ANKRD20A5PA0PJZ0 165 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 RHPN2P1A8MT19 583 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 C4orf51C9J302 202 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 SULT1B1O43704 296 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 SFTPBP07988 381 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 ZNF14P17017 642 aaPredicted RBP13.08□□□□□ -0.32
EPHB4-210ENST00000616502 DIO1P49895 249 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 RPS15AP62244 130 aaKnown RBP13.08□□□□□ -0.32
EPHB4-210ENST00000616502 C2orf68Q2NKX9 166 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 ZNF585AQ6P3V2 769 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 CSNK1A1LQ8N752 337 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 OR4N2Q8NGD1 307 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 MIB2Q96AX9 1013 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 FAM3DQ96BQ1 224 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 GPER1Q99527 375 aa13.08□□□□□ -0.32
EPHB4-210ENST00000616502 SNRNP200O75643 2136 aaKnown RBP13.07□□□□□ -0.32
EPHB4-210ENST00000616502 POLEQ07864 2286 aa13.07□□□□□ -0.32
EPHB4-210ENST00000616502 H0YGG7 62 aa13.07□□□□□ -0.32
EPHB4-210ENST00000616502 OR4E1P0C645 316 aa13.07□□□□□ -0.32
EPHB4-210ENST00000616502 RD3LP0DJH9 198 aa13.07□□□□□ -0.32
EPHB4-210ENST00000616502 AKR1C3P42330 323 aa13.07□□□□□ -0.32
EPHB4-210ENST00000616502 ARF3P61204 181 aaPredicted RBP13.07□□□□□ -0.32
EPHB4-210ENST00000616502 PDZK1IP1Q13113 114 aa13.07□□□□□ -0.32
EPHB4-210ENST00000616502 TMEM71Q6P5X7 295 aa13.07□□□□□ -0.32
EPHB4-210ENST00000616502 DND1Q8IYX4 353 aaKnown RBP13.07□□□□□ -0.32
EPHB4-210ENST00000616502 OR1J4Q8NGS1 313 aa13.07□□□□□ -0.32
EPHB4-210ENST00000616502 OR2L8Q8NGY9 312 aa13.07□□□□□ -0.32
EPHB4-210ENST00000616502 ELOVL3Q9HB03 270 aa13.07□□□□□ -0.32
EPHB4-210ENST00000616502 PCDHB10Q9UN67 800 aa13.07□□□□□ -0.32
EPHB4-210ENST00000616502 GBF1Q92538 1859 aa13.07□□□□□ -0.32
EPHB4-210ENST00000616502 FGF17O60258 216 aa13.07□□□□□ -0.32
EPHB4-210ENST00000616502 OPN1LWP04000 364 aa13.07□□□□□ -0.32
EPHB4-210ENST00000616502 CFIP05156 583 aa13.07□□□□□ -0.32
EPHB4-210ENST00000616502 CTSBP07858 339 aa13.07□□□□□ -0.32
EPHB4-210ENST00000616502 PGAM2P15259 253 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms