RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 ADH6P28332 368 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 ID4P47928 161 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 DIO1P49895 249 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 TAS2R19P59542 299 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 CTXN1P60606 82 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 NTHL1P78549 312 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 ALKBH1Q13686 389 aaKnown RBP6.08□□□□□ -1.44
LMO3-235ENST00000616247 EBPQ15125 230 aaKnown RBP6.08□□□□□ -1.44
LMO3-235ENST00000616247 TMEM35AQ53FP2 167 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 PDZD11Q5EBL8 140 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 GLYATL3Q5SZD4 288 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 OR52W1Q6IF63 320 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 BAP18Q8IXM2 172 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 RNF113BQ8IZP6 322 aaKnown RBP6.08□□□□□ -1.44
LMO3-235ENST00000616247 SHISA5Q8N114 240 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 SYS1Q8N2H4 156 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 POMGNT2Q8NAT1 580 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 GPR148Q8TDV2 347 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 TCTEX1D2Q8WW35 142 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 TRMT2BQ96GJ1 504 aaKnown RBP6.08□□□□□ -1.44
LMO3-235ENST00000616247 ARL5BQ96KC2 179 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 ELF4Q99607 663 aaPredicted RBP6.08□□□□□ -1.44
LMO3-235ENST00000616247 KRTAP3-3Q9BYR6 98 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 KRTAP3-2Q9BYR7 98 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 AICDAQ9GZX7 198 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 RHOFQ9HBH0 211 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 ANKRD10Q9NXR5 420 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 MSRAQ9UJ68 235 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 SLC22A13Q9Y226 551 aa6.08□□□□□ -1.44
LMO3-235ENST00000616247 MED19A0JLT2 244 aaPredicted RBP6.07□□□□□ -1.44
LMO3-235ENST00000616247 ABLIM3O94929 683 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 ARG1P05089 322 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 HPGDP15428 266 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 S100PP25815 95 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 ABCD3P28288 659 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 CTGFP29279 349 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 GRK6P43250 576 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 RAB28P51157 221 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 PNLIPRP2P54317 469 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 RAB2AP61019 212 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 DEFA6Q01524 100 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 ZNF616Q08AN1 781 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 PPP1R1AQ13522 171 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 IL10RAQ13651 578 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 LY6G6FQ5SQ64 297 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 ATPAF1Q5TC12 328 aaPredicted RBP6.07□□□□□ -1.44
LMO3-235ENST00000616247 ABHD13Q7L211 337 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 OR2L13Q8N349 312 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 OR2A1Q8NGT9 310 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 ZNF558Q96NG5 402 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 PHB2Q99623 299 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 TGIF2Q9GZN2 237 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 EIF5A2Q9GZV4 153 aaKnown RBP6.07□□□□□ -1.44
LMO3-235ENST00000616247 RGCCQ9H4X1 137 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 ACKR4Q9NPB9 350 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 SMCO4Q9NRQ5 59 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 ASH2LQ9UBL3 628 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 ZNF223Q9UK11 482 aaPredicted RBP6.07□□□□□ -1.44
LMO3-235ENST00000616247 ADAM29Q9UKF5 820 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 TNFSF18Q9UNG2 199 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 KCNK7Q9Y2U2 307 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 SEC16AO15027 2179 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 TET1Q8NFU7 2136 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 A0A1W2PPE3 182 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 PQLC2LA1A4F0 135 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 PRR32B1ATL7 298 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 SRPX2O60687 465 aaPredicted RBP6.07□□□□□ -1.44
LMO3-235ENST00000616247 TBX19O60806 448 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 AGR2O95994 175 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 PLGP00747 810 aaPredicted RBP6.07□□□□□ -1.44
LMO3-235ENST00000616247 PRNPP04156 253 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 ERCC1P07992 297 aaPredicted RBP6.07□□□□□ -1.44
LMO3-235ENST00000616247 SFTA3P0C7M3 94 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 SERPINF1P36955 418 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 GNALP38405 381 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 DNASE1L1P49184 302 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 F2RL1P55085 397 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 MLC1Q15049 377 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 NR0B2Q15466 257 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 INPP5JQ15735 1006 aaPredicted RBP6.07□□□□□ -1.44
LMO3-235ENST00000616247 LCN10Q6JVE6 187 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 TMPRSS11FQ6ZWK6 438 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 LURAP1LQ8IV03 231 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 FAM24BQ8N5W8 94 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 SEMA6DQ8NFY4 1073 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 OR5M8Q8NGP6 311 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 LCN9Q8WX39 176 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 ROBO4Q8WZ75 1007 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 ARRDC3Q96B67 414 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 CMBLQ96DG6 245 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 LMLNQ96KR4 655 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 MAP3K3Q99759 626 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 NAA11Q9BSU3 229 aaPredicted RBP6.07□□□□□ -1.44
LMO3-235ENST00000616247 CST11Q9H112 138 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 RSPH9Q9H1X1 276 aaPredicted RBP6.07□□□□□ -1.44
LMO3-235ENST00000616247 FRRS1LQ9P0K9 344 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 CKLFQ9UBR5 152 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 KLHDC2Q9Y2U9 406 aa6.07□□□□□ -1.44
LMO3-235ENST00000616247 KLF2Q9Y5W3 355 aaPredicted RBP6.07□□□□□ -1.44
LMO3-235ENST00000616247 ATG2BQ96BY7 2078 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms