RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 NRN1LQ496H8 165 aa11.62□□□□□ -0.55
MDC1-209ENST00000613547 FAHD1Q6P587 224 aa11.62□□□□□ -0.55
MDC1-209ENST00000613547 TMEM108Q6UXF1 575 aa11.62□□□□□ -0.55
MDC1-209ENST00000613547 C22orf34Q6ZV56 151 aa11.62□□□□□ -0.55
MDC1-209ENST00000613547 TMEM200AQ86VY9 491 aa11.62□□□□□ -0.55
MDC1-209ENST00000613547 NSMAFQ92636 917 aa11.62□□□□□ -0.55
MDC1-209ENST00000613547 SNX18Q96RF0 628 aa11.62□□□□□ -0.55
MDC1-209ENST00000613547 PKP2Q99959 881 aa11.62□□□□□ -0.55
MDC1-209ENST00000613547 PLA2G12AQ9BZM1 189 aa11.62□□□□□ -0.55
MDC1-209ENST00000613547 GABARAPL1Q9H0R8 117 aa11.62□□□□□ -0.55
MDC1-209ENST00000613547 SYT4Q9H2B2 425 aa11.62□□□□□ -0.55
MDC1-209ENST00000613547 KCNN2Q9H2S1 579 aa11.62□□□□□ -0.55
MDC1-209ENST00000613547 KRT84Q9NSB2 600 aa11.62□□□□□ -0.55
MDC1-209ENST00000613547 VSX1Q9NZR4 365 aaPredicted RBP11.62□□□□□ -0.55
MDC1-209ENST00000613547 SLC25A15Q9Y619 301 aa11.62□□□□□ -0.55
MDC1-209ENST00000613547 HCFC1P51610 2035 aa11.62□□□□□ -0.55
MDC1-209ENST00000613547 A0A1W2PPL8 197 aa11.61□□□□□ -0.55
MDC1-209ENST00000613547 A0A1W2PR80 420 aa11.61□□□□□ -0.55
MDC1-209ENST00000613547 SAC3D1A6NKF1 404 aa11.61□□□□□ -0.55
MDC1-209ENST00000613547 RIIAD1A6NNX1 92 aa11.61□□□□□ -0.55
MDC1-209ENST00000613547 IFNGP01579 166 aa11.61□□□□□ -0.55
MDC1-209ENST00000613547 OR8G3PP0DMU2 310 aa11.61□□□□□ -0.55
MDC1-209ENST00000613547 HIST1H1CP16403 213 aaKnown RBP11.61□□□□□ -0.55
MDC1-209ENST00000613547 NPR2P20594 1047 aa11.61□□□□□ -0.55
MDC1-209ENST00000613547 MRPS34P82930 218 aaKnown RBP11.61□□□□□ -0.55
MDC1-209ENST00000613547 SLC35F1Q5T1Q4 408 aa11.61□□□□□ -0.55
MDC1-209ENST00000613547 SLC27A4Q6P1M0 643 aa11.61□□□□□ -0.55
MDC1-209ENST00000613547 LEG1Q6P5S2 330 aa11.61□□□□□ -0.55
MDC1-209ENST00000613547 DPPA2Q7Z7J5 298 aa11.61□□□□□ -0.55
MDC1-209ENST00000613547 ZNF295-AS1Q8N0V1 137 aa11.61□□□□□ -0.55
MDC1-209ENST00000613547 PQLC1Q8N2U9 271 aa11.61□□□□□ -0.55
MDC1-209ENST00000613547 PARP8Q8N3A8 854 aa11.61□□□□□ -0.55
MDC1-209ENST00000613547 LNX2Q8N448 690 aa11.61□□□□□ -0.55
MDC1-209ENST00000613547 SLC22A24Q8N4F4 322 aa11.61□□□□□ -0.55
MDC1-209ENST00000613547 OR8D4Q8NGM9 314 aa11.61□□□□□ -0.55
MDC1-209ENST00000613547 OR4K13Q8NH42 304 aa11.61□□□□□ -0.55
MDC1-209ENST00000613547 NMD3Q96D46 503 aaKnown RBP11.61□□□□□ -0.55
MDC1-209ENST00000613547 PIK3IP1Q96FE7 263 aa11.61□□□□□ -0.55
MDC1-209ENST00000613547 PRRG3Q9BZD7 231 aa11.61□□□□□ -0.55
MDC1-209ENST00000613547 RERGLQ9H628 205 aa11.61□□□□□ -0.55
MDC1-209ENST00000613547 SEC61A2Q9H9S3 476 aa11.61□□□□□ -0.55
MDC1-209ENST00000613547 TMEM38BQ9NVV0 291 aa11.61□□□□□ -0.55
MDC1-209ENST00000613547 REV1Q9UBZ9 1251 aa11.61□□□□□ -0.55
MDC1-209ENST00000613547 KLHL21Q9UJP4 597 aa11.61□□□□□ -0.55
MDC1-209ENST00000613547 ORC6Q9Y5N6 252 aa11.61□□□□□ -0.55
MDC1-209ENST00000613547 CENPEQ02224 2701 aa11.61□□□□□ -0.55
MDC1-209ENST00000613547 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.6□□□□□ -0.55
MDC1-209ENST00000613547 SLC16A7O60669 478 aa11.6□□□□□ -0.55
MDC1-209ENST00000613547 KHDRBS3O75525 346 aaKnown RBP11.6□□□□□ -0.55
MDC1-209ENST00000613547 CTAG2O75638 210 aa11.6□□□□□ -0.55
MDC1-209ENST00000613547 UBL3O95164 117 aa11.6□□□□□ -0.55
MDC1-209ENST00000613547 BAG2O95816 211 aa11.6□□□□□ -0.55
MDC1-209ENST00000613547 TP53P04637 393 aaPredicted RBP11.6□□□□□ -0.55
MDC1-209ENST00000613547 IGFBP1P08833 259 aaPredicted RBP11.6□□□□□ -0.55
MDC1-209ENST00000613547 IGFBP5P24593 272 aa11.6□□□□□ -0.55
MDC1-209ENST00000613547 PTAFRP25105 342 aa11.6□□□□□ -0.55
MDC1-209ENST00000613547 GRK5P34947 590 aa11.6□□□□□ -0.55
MDC1-209ENST00000613547 ARR3P36575 388 aa11.6□□□□□ -0.55
MDC1-209ENST00000613547 DAPP51397 102 aa11.6□□□□□ -0.55
MDC1-209ENST00000613547 ZNF83P51522 516 aa11.6□□□□□ -0.55
MDC1-209ENST00000613547 ESRRGP62508 458 aa11.6□□□□□ -0.55
MDC1-209ENST00000613547 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.6□□□□□ -0.55
MDC1-209ENST00000613547 SGCAQ16586 387 aa11.6□□□□□ -0.55
MDC1-209ENST00000613547 GSG1Q2KHT4 349 aa11.6□□□□□ -0.55
MDC1-209ENST00000613547 PGGHGQ32M88 737 aa11.6□□□□□ -0.55
MDC1-209ENST00000613547 SLC36A2Q495M3 483 aa11.6□□□□□ -0.55
MDC1-209ENST00000613547 SLC25A47Q6Q0C1 308 aa11.6□□□□□ -0.55
MDC1-209ENST00000613547 WDR31Q8NA23 367 aa11.6□□□□□ -0.55
MDC1-209ENST00000613547 OR52E2Q8NGJ4 325 aa11.6□□□□□ -0.55
MDC1-209ENST00000613547 NMNAT3Q96T66 252 aa11.6□□□□□ -0.55
MDC1-209ENST00000613547 RBM4BQ9BQ04 359 aaKnown RBP11.6□□□□□ -0.55
MDC1-209ENST00000613547 RBM4Q9BWF3 364 aaKnown RBP11.6□□□□□ -0.55
MDC1-209ENST00000613547 CLEC4MQ9H2X3 399 aaPredicted RBP11.6□□□□□ -0.55
MDC1-209ENST00000613547 NELFAQ9H3P2 528 aa11.6□□□□□ -0.55
MDC1-209ENST00000613547 SIAEQ9HAT2 523 aa11.6□□□□□ -0.55
MDC1-209ENST00000613547 RASSF1Q9NS23 344 aa11.6□□□□□ -0.55
MDC1-209ENST00000613547 DEFB108AA8MXU0 73 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 M0R1B8 84 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 RAB36O95755 333 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 HRGP04196 525 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 HMGN1P05114 100 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 CD3EP07766 207 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 CD79AP11912 226 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 ZNF3P17036 446 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 PAICSP22234 425 aaKnown RBP11.59□□□□□ -0.55
MDC1-209ENST00000613547 CDKN2AP42771 156 aaKnown RBP11.59□□□□□ -0.55
MDC1-209ENST00000613547 GIPRP48546 466 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 CENPAP49450 140 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 GINS1Q14691 196 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 KDM4DQ6B0I6 523 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 PTCHD4Q6ZW05 846 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 SLC16A14Q7RTX9 510 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 GLB1L2Q8IW92 636 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 FAM169BQ8N8A8 192 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 SDR9C7Q8NEX9 313 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 OR4Q3Q8NH05 313 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 PLPPR2Q96GM1 343 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 PLEKHA8Q96JA3 519 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 CIB1Q99828 191 aa11.59□□□□□ -0.55
MDC1-209ENST00000613547 KCNS3Q9BQ31 491 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms