RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 C1orf162Q8NEQ5 155 aaPredicted RBP6.12□□□□□ -1.43
PTCHD3P1-201ENST00000612350 NUP37Q8NFH4 326 aa6.12□□□□□ -1.43
PTCHD3P1-201ENST00000612350 OR52E4Q8NGH9 312 aa6.12□□□□□ -1.43
PTCHD3P1-201ENST00000612350 FBXO27Q8NI29 283 aa6.12□□□□□ -1.43
PTCHD3P1-201ENST00000612350 DNAJA4Q8WW22 397 aaPredicted RBP6.12□□□□□ -1.43
PTCHD3P1-201ENST00000612350 CNOT9Q92600 299 aaKnown RBP6.12□□□□□ -1.43
PTCHD3P1-201ENST00000612350 APH1AQ96BI3 265 aa6.12□□□□□ -1.43
PTCHD3P1-201ENST00000612350 SLC38A2Q96QD8 506 aa6.12□□□□□ -1.43
PTCHD3P1-201ENST00000612350 CDRT15Q96T59 188 aa6.12□□□□□ -1.43
PTCHD3P1-201ENST00000612350 KATNB1Q9BVA0 655 aa6.12□□□□□ -1.43
PTCHD3P1-201ENST00000612350 PIF1Q9H611 641 aa6.12□□□□□ -1.43
PTCHD3P1-201ENST00000612350 GORASP2Q9H8Y8 452 aa6.12□□□□□ -1.43
PTCHD3P1-201ENST00000612350 DYNLRB1Q9NP97 96 aa6.12□□□□□ -1.43
PTCHD3P1-201ENST00000612350 RLIMQ9NVW2 624 aa6.12□□□□□ -1.43
PTCHD3P1-201ENST00000612350 NECAP2Q9NVZ3 263 aa6.12□□□□□ -1.43
PTCHD3P1-201ENST00000612350 CD300AQ9UGN4 299 aa6.12□□□□□ -1.43
PTCHD3P1-201ENST00000612350 MAGEL2Q9UJ55 1249 aa6.12□□□□□ -1.43
PTCHD3P1-201ENST00000612350 RPS6KA6Q9UK32 745 aa6.12□□□□□ -1.43
PTCHD3P1-201ENST00000612350 CHST2Q9Y4C5 530 aa6.12□□□□□ -1.43
PTCHD3P1-201ENST00000612350 SOX21Q9Y651 276 aaPredicted RBP6.12□□□□□ -1.43
PTCHD3P1-201ENST00000612350 CXCR6O00574 342 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 GYG2O15488 501 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 PPIHO43447 177 aaKnown RBP6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 DNPH1O43598 174 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 BCAS1O75363 584 aaPredicted RBP6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 SEC14L2O76054 403 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 UBOX5O94941 541 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 CRYAAP02489 173 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 OPN1MWP04001 364 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 OPN1MW2P0DN77 364 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 OPN1MW3P0DN78 364 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 PNMTP11086 282 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 HOXB6P17509 224 aaKnown RBP6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 CD247P20963 164 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 IFNA8P32881 189 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 RYKP34925 604 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 RGS8P57771 180 aaPredicted RBP6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 PROK1P58294 105 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 NAAAQ02083 359 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 PLAURQ03405 335 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 MERTKQ12866 999 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 BNIP1Q12981 228 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 PDK3Q15120 406 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 TOMM34Q15785 309 aaPredicted RBP6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 DUSP7Q16829 419 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 NDUFAF6Q330K2 333 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 MTX3Q5HYI7 312 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 C9orf135Q5VTT2 229 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 GLYATQ6IB77 296 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 ANKRD16Q6P6B7 361 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 ZNF613Q6PF04 617 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 ULK3Q6PHR2 472 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 C6orf89Q6UWU4 347 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 CBLL1Q75N03 491 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 SMYD1Q8NB12 490 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 DEFB108BQ8NET1 73 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 OR4F15Q8NGB8 312 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 PPP1R14AQ96A00 147 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 FAM162AQ96A26 154 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 TAMM41Q96BW9 452 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 DDIT4LQ96D03 193 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 BOD1Q96IK1 185 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 ARHGDIGQ99819 225 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 BTBD10Q9BSF8 475 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 PCDHAC1Q9H158 963 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 MMADHCQ9H3L0 296 aaPredicted RBP6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 TMEM27Q9HBJ8 222 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 TCF7L1Q9HCS4 588 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 BRD7Q9NPI1 651 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 TAS2R1Q9NYW7 299 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 SELENONQ9NZV5 590 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 RPS6KB2Q9UBS0 482 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 CHRNA9Q9UGM1 479 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 SAMD4AQ9UPU9 718 aaKnown RBP6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 HDGFL3Q9Y3E1 203 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 RNF114Q9Y508 228 aa6.11□□□□□ -1.43
PTCHD3P1-201ENST00000612350 COL7A1Q02388 2944 aa6.1□□□□□ -1.43
PTCHD3P1-201ENST00000612350 ZNF716A6NP11 495 aa6.1□□□□□ -1.43
PTCHD3P1-201ENST00000612350 EBAG9O00559 213 aa6.1□□□□□ -1.43
PTCHD3P1-201ENST00000612350 AP3D1O14617 1153 aa6.1□□□□□ -1.43
PTCHD3P1-201ENST00000612350 TPST1O60507 370 aa6.1□□□□□ -1.43
PTCHD3P1-201ENST00000612350 GPANK1O95872 356 aa6.1□□□□□ -1.43
PTCHD3P1-201ENST00000612350 WNT11O96014 354 aa6.1□□□□□ -1.43
PTCHD3P1-201ENST00000612350 IGHV2-5P01817 119 aa6.1□□□□□ -1.43
PTCHD3P1-201ENST00000612350 OPN1SWP03999 348 aa6.1□□□□□ -1.43
PTCHD3P1-201ENST00000612350 CSF1P09603 554 aa6.1□□□□□ -1.43
PTCHD3P1-201ENST00000612350 CECR9P0C854 216 aa6.1□□□□□ -1.43
PTCHD3P1-201ENST00000612350 GKN3PP0CG01 181 aa6.1□□□□□ -1.43
PTCHD3P1-201ENST00000612350 THRBP10828 461 aa6.1□□□□□ -1.43
PTCHD3P1-201ENST00000612350 CXCR1P25024 350 aa6.1□□□□□ -1.43
PTCHD3P1-201ENST00000612350 TACR3P29371 465 aa6.1□□□□□ -1.43
PTCHD3P1-201ENST00000612350 SLC7A1P30825 629 aa6.1□□□□□ -1.43
PTCHD3P1-201ENST00000612350 CRYBA2P53672 197 aa6.1□□□□□ -1.43
PTCHD3P1-201ENST00000612350 CSNK2A1P68400 391 aaPredicted RBP6.1□□□□□ -1.43
PTCHD3P1-201ENST00000612350 MRPS11P82912 194 aaKnown RBP6.1□□□□□ -1.43
PTCHD3P1-201ENST00000612350 TRAP1Q12931 704 aaKnown RBP6.1□□□□□ -1.43
PTCHD3P1-201ENST00000612350 TRIM25Q14258 630 aaKnown RBP6.1□□□□□ -1.43
PTCHD3P1-201ENST00000612350 MSMPQ1L6U9 139 aa6.1□□□□□ -1.43
PTCHD3P1-201ENST00000612350 C2orf68Q2NKX9 166 aa6.1□□□□□ -1.43
PTCHD3P1-201ENST00000612350 LRRC23Q53EV4 343 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms