RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 FNDC1Q4ZHG4 1894 aaPredicted RBP7.9□□□□□ -1.15
LIG4-204ENST00000611712 OGG1O15527 345 aa7.9□□□□□ -1.15
LIG4-204ENST00000611712 PTP4A3O75365 173 aa7.9□□□□□ -1.15
LIG4-204ENST00000611712 KLK3P07288 261 aaPredicted RBP7.9□□□□□ -1.15
LIG4-204ENST00000611712 NR2C1P13056 603 aa7.9□□□□□ -1.15
LIG4-204ENST00000611712 IFNGR1P15260 489 aa7.9□□□□□ -1.15
LIG4-204ENST00000611712 ZNF43P17038 809 aa7.9□□□□□ -1.15
LIG4-204ENST00000611712 FZD2Q14332 565 aa7.9□□□□□ -1.15
LIG4-204ENST00000611712 ZNF141Q15928 474 aa7.9□□□□□ -1.15
LIG4-204ENST00000611712 ZNF362Q5T0B9 420 aaPredicted RBP7.9□□□□□ -1.15
LIG4-204ENST00000611712 EEF1A1P5Q5VTE0 462 aa7.9□□□□□ -1.15
LIG4-204ENST00000611712 DGAT2L6Q6ZPD8 337 aa7.9□□□□□ -1.15
LIG4-204ENST00000611712 ELP5Q8TE02 316 aa7.9□□□□□ -1.15
LIG4-204ENST00000611712 PPP1R14AQ96A00 147 aa7.9□□□□□ -1.15
LIG4-204ENST00000611712 VSTM2LQ96N03 204 aa7.9□□□□□ -1.15
LIG4-204ENST00000611712 SLCO1C1Q9NYB5 712 aa7.9□□□□□ -1.15
LIG4-204ENST00000611712 PRELID1Q9Y255 219 aa7.9□□□□□ -1.15
LIG4-204ENST00000611712 CCDC85CA6NKD9 419 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 TP53I11O14683 189 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 MT-ATP6P00846 226 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 HLA-AP01891 365 aaKnown RBP7.89□□□□□ -1.15
LIG4-204ENST00000611712 CSTBP04080 98 aaKnown RBP7.89□□□□□ -1.15
LIG4-204ENST00000611712 ACAA2P42765 397 aaKnown RBP7.89□□□□□ -1.15
LIG4-204ENST00000611712 PER3P56645 1201 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 EXOSC2Q13868 293 aaKnown RBP7.89□□□□□ -1.15
LIG4-204ENST00000611712 LINC00303Q3SY05 128 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 FAM180AQ6UWF9 173 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 GRAMD2AQ8IUY3 354 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 RFLNBQ8N5W9 214 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 LSMEM1Q8N8F7 131 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 NEK7Q8TDX7 302 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 NPRL2Q8WTW4 380 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 VOPP1Q96AW1 172 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 ZBTB8AQ96BR9 441 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 HAVCR1Q96D42 359 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 RNF170Q96K19 258 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 OR1F2PQ96R84 312 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 CRB3Q9BUF7 120 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 LAT2Q9GZY6 243 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 OR2S2Q9NQN1 319 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 CHRNA9Q9UGM1 479 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 DTX4Q9Y2E6 619 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 PCNTO95613 3336 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 C9J4A7 227 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 H0YIG0 161 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 P2RY10O00398 339 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 EIF4E2O60573 245 aaKnown RBP7.89□□□□□ -1.15
LIG4-204ENST00000611712 CXCL3P19876 107 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 RAB3AP20336 220 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 CD27P26842 260 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 MAP1BP46821 2468 aaKnown RBP7.89□□□□□ -1.15
LIG4-204ENST00000611712 IL13RA1P78552 427 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 SCRN3Q0VDG4 424 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 GSG1Q2KHT4 349 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 TEX261Q6UWH6 196 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 DCXRQ7Z4W1 244 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 ABHD12BQ7Z5M8 362 aaPredicted RBP7.89□□□□□ -1.15
LIG4-204ENST00000611712 TEX19Q8NA77 164 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 NPEPL1Q8NDH3 523 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 OR5D14Q8NGL3 314 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 OR13C9Q8NGT0 318 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 SEC22AQ96IW7 307 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 MCOLN1Q9GZU1 580 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 PILRAQ9UKJ1 303 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 MEMO1Q9Y316 297 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 U3KQ87 197 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 TEX13DA0A0J9YY54 714 aaPredicted RBP7.89□□□□□ -1.15
LIG4-204ENST00000611712 A0A1B0GUH1 482 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 FITM1A5D6W6 292 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 NUPL2O15504 423 aaKnown RBP7.89□□□□□ -1.15
LIG4-204ENST00000611712 IL33O95760 270 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 GPANK1O95872 356 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 RLN2P04090 185 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 ZNF28P17035 718 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 AMY2BP19961 511 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 S100A11P31949 105 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 C14orf28Q4W4Y0 310 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 BEX5Q5H9J7 111 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 GSG1LQ6UXU4 331 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 CFAP77Q6ZQR2 320 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 COX15Q7KZN9 410 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 NLRC3Q7RTR2 1065 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 GRINAQ7Z429 371 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 ZNF679Q8IYX0 411 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 DND1Q8IYX4 353 aaKnown RBP7.89□□□□□ -1.15
LIG4-204ENST00000611712 ZNF454Q8N9F8 522 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 FAM181AQ8N9Y4 354 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 STEAP2Q8NFT2 490 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 SLC22A8Q8TCC7 542 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.89□□□□□ -1.15
LIG4-204ENST00000611712 PHB2Q99623 299 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 NKX3-1Q99801 234 aaPredicted RBP7.89□□□□□ -1.15
LIG4-204ENST00000611712 WDR77Q9BQA1 342 aaPredicted RBP7.89□□□□□ -1.15
LIG4-204ENST00000611712 TREM1Q9NP99 234 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 ZNF701Q9NV72 531 aaPredicted RBP7.89□□□□□ -1.15
LIG4-204ENST00000611712 EVA1BQ9NVM1 165 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 OR5V1Q9UGF6 321 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 SRPK3Q9UPE1 567 aa7.89□□□□□ -1.15
LIG4-204ENST00000611712 RPH3AQ9Y2J0 694 aaPredicted RBP7.89□□□□□ -1.15
LIG4-204ENST00000611712 TRBV11-1A0A0K0K1C0 115 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms