RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 TMEM212A6NML5 194 aa13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 CT45A8P0DMV1 189 aa13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 CT45A9P0DMV2 189 aa13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 LIPCP11150 499 aa13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 MGMTP16455 207 aa13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 CCR4P51679 360 aa13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 RAB38P57729 211 aa13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 MC2RQ01718 297 aa13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 CT45A2Q5DJT8 189 aa13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 MCATQ8IVS2 390 aaKnown RBP13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 BEST3Q8N1M1 668 aa13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 C12orf45Q8N5I9 185 aaPredicted RBP13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 STEAP2Q8NFT2 490 aa13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 PAWRQ96IZ0 340 aaKnown RBP13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 C4orf45Q96LM5 186 aa13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 TSPAN32Q96QS1 320 aa13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 LPAR4Q99677 370 aa13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 PLA2G2FQ9BZM2 168 aa13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 ZMAT3Q9HA38 289 aaKnown RBP13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 SLC22A13Q9Y226 551 aa13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 NUP210LQ5VU65 1888 aa13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 CCSO14618 274 aa13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 ALOX12BO75342 701 aa13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 TPPPO94811 219 aa13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 UBBP0CG47 229 aa13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 UBCP0CG48 685 aaKnown RBP13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 RPS27AP62979 156 aaKnown RBP13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 UBA52P62987 128 aaKnown RBP13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 CD226Q15762 336 aa13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 SLC35D2Q76EJ3 337 aa13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 ZNF761Q86XN6 746 aaPredicted RBP13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 BCORP1Q8N888 145 aa13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 GPX8Q8TED1 209 aa13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 NARS2Q96I59 477 aaKnown RBP13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 SYT4Q9H2B2 425 aa13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 PLCL2Q9UPR0 1127 aa13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 OR10H1Q9Y4A9 318 aa13.69□□□□□ -0.22
PCDHGB1-202ENST00000611598 ARID1BQ8NFD5 2236 aaPredicted RBP13.68□□□□□ -0.22
PCDHGB1-202ENST00000611598 SCAND1P57086 179 aa13.68□□□□□ -0.22
PCDHGB1-202ENST00000611598 EGR4Q05215 589 aa13.68□□□□□ -0.22
PCDHGB1-202ENST00000611598 RPL18Q07020 188 aaKnown RBP13.68□□□□□ -0.22
PCDHGB1-202ENST00000611598 ATXN7L3Q14CW9 347 aaPredicted RBP13.68□□□□□ -0.22
PCDHGB1-202ENST00000611598 RAB11BQ15907 218 aa13.68□□□□□ -0.22
PCDHGB1-202ENST00000611598 JMJD6Q6NYC1 403 aaPredicted RBP13.68□□□□□ -0.22
PCDHGB1-202ENST00000611598 CBLN3Q6UW01 205 aa13.68□□□□□ -0.22
PCDHGB1-202ENST00000611598 LINC00518Q8N0U6 118 aa13.68□□□□□ -0.22
PCDHGB1-202ENST00000611598 TWSG1Q9GZX9 223 aa13.68□□□□□ -0.22
PCDHGB1-202ENST00000611598 Q9N2J8 555 aa13.68□□□□□ -0.22
PCDHGB1-202ENST00000611598 MMP25Q9NPA2 562 aa13.68□□□□□ -0.22
PCDHGB1-202ENST00000611598 MYEF2Q9P2K5 600 aaKnown RBP13.68□□□□□ -0.22
PCDHGB1-202ENST00000611598 GTF2A1LQ9UNN4 478 aa13.68□□□□□ -0.22
PCDHGB1-202ENST00000611598 LOC100289279A0A1B0GTE1 492 aa13.68□□□□□ -0.22
PCDHGB1-202ENST00000611598 OR5H14A6NHG9 310 aa13.68□□□□□ -0.22
PCDHGB1-202ENST00000611598 CDC40O60508 579 aaKnown RBP eCLIP13.68□□□□□ -0.22
PCDHGB1-202ENST00000611598 SRPX2O60687 465 aaPredicted RBP13.68□□□□□ -0.22
PCDHGB1-202ENST00000611598 RAB3DO95716 219 aa13.68□□□□□ -0.22
PCDHGB1-202ENST00000611598 RAB3AP20336 220 aa13.68□□□□□ -0.22
PCDHGB1-202ENST00000611598 SEH1LQ96EE3 360 aa13.68□□□□□ -0.22
PCDHGB1-202ENST00000611598 SAV1Q9H4B6 383 aaPredicted RBP13.68□□□□□ -0.22
PCDHGB1-202ENST00000611598 FAM60AQ9NP50 221 aa13.68□□□□□ -0.22
PCDHGB1-202ENST00000611598 GRHPRQ9UBQ7 328 aa13.68□□□□□ -0.22
PCDHGB1-202ENST00000611598 PCOLCE2Q9UKZ9 415 aa13.68□□□□□ -0.22
PCDHGB1-202ENST00000611598 SZT2Q5T011 3432 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 RANBP2P49792 3224 aaKnown RBP13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 C2orf16Q68DN1 1984 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 PMS2P2O95744 297 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 AMY2AP04746 511 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 STARP49675 285 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 PRMT2P55345 433 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 BTG2P78543 158 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 PDSS1Q5T2R2 415 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 ATPAF1Q5TC12 328 aaPredicted RBP13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 MOB3CQ70IA8 216 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 NDUFAF7Q7L592 441 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 ATG4DQ86TL0 474 aaPredicted RBP13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 C16orf52Q8NHV5 167 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 RSC1A1Q92681 617 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 KTI12Q96EK9 354 aaPredicted RBP13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 SEC22AQ96IW7 307 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 DCBLD2Q96PD2 775 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 MNTQ99583 582 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 CCDC3Q9BQI4 270 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 NKX6-2Q9C056 277 aaPredicted RBP13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 ALX4Q9H161 411 aaPredicted RBP13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 FANCMQ8IYD8 2048 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 KNL1Q8NG31 2342 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 A0A0A6YYC8 382 aaPredicted RBP13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 I3L1I5 382 aaPredicted RBP13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 SLC17A2O00624 439 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 GMFGO60234 142 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 ZNF432O94892 652 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 PNPP00491 289 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 APODP05090 189 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 CSN2P05814 226 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 ASAH2BP0C7U1 165 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 ZNF627Q7L945 461 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 PM20D2Q8IYS1 436 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 INTS14Q96SY0 518 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 G6PC3Q9BUM1 346 aa13.67□□□□□ -0.22
PCDHGB1-202ENST00000611598 SLC19A3Q9BZV2 496 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms