RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 SERPINA11Q86U17 422 aa5.37□□□□□ -1.55
CUX1-220ENST00000607092 MYPOPQ86VE0 399 aaPredicted RBP5.37□□□□□ -1.55
CUX1-220ENST00000607092 CLIP4Q8N3C7 705 aa5.37□□□□□ -1.55
CUX1-220ENST00000607092 SLC22A24Q8N4F4 322 aa5.37□□□□□ -1.55
CUX1-220ENST00000607092 C10orf53Q8N6V4 93 aa5.37□□□□□ -1.55
CUX1-220ENST00000607092 OR6X1Q8NH79 312 aa5.37□□□□□ -1.55
CUX1-220ENST00000607092 HIST1H2ACQ93077 130 aa5.37□□□□□ -1.55
CUX1-220ENST00000607092 TAAR8Q969N4 342 aa5.37□□□□□ -1.55
CUX1-220ENST00000607092 SLC25A44Q96H78 314 aaPredicted RBP5.37□□□□□ -1.55
CUX1-220ENST00000607092 PPP1R36Q96LQ0 422 aa5.37□□□□□ -1.55
CUX1-220ENST00000607092 MAGEB18Q96M61 343 aa5.37□□□□□ -1.55
CUX1-220ENST00000607092 SLC6A7Q99884 636 aa5.37□□□□□ -1.55
CUX1-220ENST00000607092 MRI1Q9BV20 369 aa5.37□□□□□ -1.55
CUX1-220ENST00000607092 NUF2Q9BZD4 464 aa5.37□□□□□ -1.55
CUX1-220ENST00000607092 BRD7Q9NPI1 651 aa5.37□□□□□ -1.55
CUX1-220ENST00000607092 TCF7L2Q9NQB0 619 aa5.37□□□□□ -1.55
CUX1-220ENST00000607092 PLEK2Q9NYT0 353 aa5.37□□□□□ -1.55
CUX1-220ENST00000607092 GLTPQ9NZD2 209 aa5.37□□□□□ -1.55
CUX1-220ENST00000607092 KLHL14Q9P2G3 628 aa5.37□□□□□ -1.55
CUX1-220ENST00000607092 NUP50Q9UKX7 468 aa5.37□□□□□ -1.55
CUX1-220ENST00000607092 ZDHHC8Q9ULC8 765 aa5.37□□□□□ -1.55
CUX1-220ENST00000607092 WIPI2Q9Y4P8 454 aa5.37□□□□□ -1.55
CUX1-220ENST00000607092 PCDHGB1Q9Y5G3 927 aa5.37□□□□□ -1.55
CUX1-220ENST00000607092 ISPDA4D126 451 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 DHHO43323 396 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 CDC14BO60729 498 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 DEAF1O75398 565 aaPredicted RBP5.36□□□□□ -1.55
CUX1-220ENST00000607092 RGS9O75916 674 aaPredicted RBP5.36□□□□□ -1.55
CUX1-220ENST00000607092 NCR1O76036 304 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 SEC14L2O76054 403 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 MFN2O95140 757 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 FSHBP01225 129 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 IGHV3-13P01766 116 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 IGHG1P01857 330 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 RNASE1P07998 156 aaKnown RBP5.36□□□□□ -1.55
CUX1-220ENST00000607092 ADH4P08319 380 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 ADORA3P0DMS8 318 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 PPIAL4GP0DN37 164 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 PRG2P13727 222 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 TNFRSF1AP19438 455 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 AHCYP23526 432 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 GUCA1AP43080 201 aaPredicted RBP5.36□□□□□ -1.55
CUX1-220ENST00000607092 MVDP53602 400 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 SEC24CP53992 1094 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 STX1BP61266 288 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 CCL8P80075 99 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 DEFA6Q01524 100 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 HSF2Q03933 536 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 BAMBIQ13145 260 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 RAB39AQ14964 217 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 MAD2L1BPQ15013 274 aaPredicted RBP5.36□□□□□ -1.55
CUX1-220ENST00000607092 RGNQ15493 299 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 CARD17Q5XLA6 110 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 USP51Q70EK9 711 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 MUC20Q8N307 709 aaPredicted RBP5.36□□□□□ -1.55
CUX1-220ENST00000607092 MIER2Q8N344 545 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 KLHL36Q8N4N3 616 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 ZDHHC22Q8N966 263 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 RBM15BQ8NDT2 890 aaKnown RBP5.36□□□□□ -1.55
CUX1-220ENST00000607092 OR5J2Q8NH18 312 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 FNDC8Q8TC99 324 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 YIPF5Q969M3 257 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 ZNF837Q96EG3 531 aaPredicted RBP5.36□□□□□ -1.55
CUX1-220ENST00000607092 MPP4Q96JB8 637 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 COG8Q96MW5 612 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 ZNF75AQ96N20 296 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 WACQ9BTA9 647 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 EMC6Q9BV81 110 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 THAP1Q9NVV9 213 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 IL20RAQ9UHF4 553 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 AUP1Q9Y679 476 aa5.36□□□□□ -1.55
CUX1-220ENST00000607092 TENM3Q9P273 2699 aa5.35□□□□□ -1.55
CUX1-220ENST00000607092 A0A0B4J2E0 115 aa5.35□□□□□ -1.55
CUX1-220ENST00000607092 A0A1B0GX12 115 aa5.35□□□□□ -1.55
CUX1-220ENST00000607092 WDR91A4D1P6 747 aa5.35□□□□□ -1.55
CUX1-220ENST00000607092 HTR3EA5X5Y0 456 aa5.35□□□□□ -1.55
CUX1-220ENST00000607092 ZNF503-AS2A6NEH8 195 aa5.35□□□□□ -1.55
CUX1-220ENST00000607092 EVPLLA8MZ36 301 aa5.35□□□□□ -1.55
CUX1-220ENST00000607092 MCIDASD6RGH6 385 aa5.35□□□□□ -1.55
CUX1-220ENST00000607092 MS4A18H0YCH9 400 aa5.35□□□□□ -1.55
CUX1-220ENST00000607092 CLIC1O00299 241 aa5.35□□□□□ -1.55
CUX1-220ENST00000607092 PLPP3O14495 311 aa5.35□□□□□ -1.55
CUX1-220ENST00000607092 KCNAB3O43448 404 aa5.35□□□□□ -1.55
CUX1-220ENST00000607092 IGHMP01871 453 aa5.35□□□□□ -1.55
CUX1-220ENST00000607092 FAM157BP0CG42 384 aa5.35□□□□□ -1.55
CUX1-220ENST00000607092 SLC6A2P23975 617 aa5.35□□□□□ -1.55
CUX1-220ENST00000607092 CDKN2CP42773 168 aa5.35□□□□□ -1.55
CUX1-220ENST00000607092 MAGEB1P43366 347 aa5.35□□□□□ -1.55
CUX1-220ENST00000607092 DAP3P51398 398 aaKnown RBP5.35□□□□□ -1.55
CUX1-220ENST00000607092 POLR2JP52435 117 aaKnown RBP5.35□□□□□ -1.55
CUX1-220ENST00000607092 ARHGDIAP52565 204 aa5.35□□□□□ -1.55
CUX1-220ENST00000607092 GYS2P54840 703 aa5.35□□□□□ -1.55
CUX1-220ENST00000607092 BIDP55957 195 aa5.35□□□□□ -1.55
CUX1-220ENST00000607092 NME5P56597 212 aa5.35□□□□□ -1.55
CUX1-220ENST00000607092 BPIFB3P59826 476 aa5.35□□□□□ -1.55
CUX1-220ENST00000607092 RPL15P61313 204 aaKnown RBP5.35□□□□□ -1.55
CUX1-220ENST00000607092 MAGOHP61326 146 aaKnown RBP5.35□□□□□ -1.55
CUX1-220ENST00000607092 PCBD1P61457 104 aa5.35□□□□□ -1.55
CUX1-220ENST00000607092 GNGT1P63211 74 aa5.35□□□□□ -1.55
CUX1-220ENST00000607092 MAPK11Q15759 364 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms