RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 ITGA5P08648 1049 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 PRR23D2P0DMB1 279 aaPredicted RBP6.76□□□□□ -1.33
MSH6-211ENST00000606499 CTLA4P16410 223 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 COX5AP20674 150 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 IGHV1-2P23083 117 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 GRNP28799 593 aaKnown RBP6.76□□□□□ -1.33
MSH6-211ENST00000606499 CCKARP32238 428 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 CDAP32320 146 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 PYCR1P32322 319 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 CAPGP40121 348 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 PCYT1AP49585 367 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 ASCL1P50553 236 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 CDC42P60953 191 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 ITGADQ13349 1161 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 ETFDHQ16134 617 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 SNAPC1Q16533 368 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 SLC25A35Q3KQZ1 300 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 C10orf128Q5T292 105 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 OTPQ5XKR4 325 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 PLBD1Q6P4A8 553 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 SLC25A47Q6Q0C1 308 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 LYPD4Q6UWN0 246 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 BEND4Q6ZU67 534 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 CXXC5Q7LFL8 322 aaKnown RBP6.76□□□□□ -1.33
MSH6-211ENST00000606499 BCDIN3DQ7Z5W3 292 aaKnown RBP6.76□□□□□ -1.33
MSH6-211ENST00000606499 CXorf67Q86X51 503 aaPredicted RBP6.76□□□□□ -1.33
MSH6-211ENST00000606499 CPOQ8IVL8 374 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 ENTHD1Q8IYW4 607 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 OR6V1Q8N148 313 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 ZNF808Q8N4W9 903 aaPredicted RBP6.76□□□□□ -1.33
MSH6-211ENST00000606499 DHRSXQ8N5I4 330 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 ZNF555Q8NEP9 628 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 OR51L1Q8NGJ5 315 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 LILRB4Q8NHJ6 448 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 TMEM163Q8TC26 289 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 ZNRF4Q8WWF5 429 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 NSMAFQ92636 917 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 MCHR2Q969V1 340 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 DDOQ99489 341 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 RBM24Q9BX46 236 aaKnown RBP6.76□□□□□ -1.33
MSH6-211ENST00000606499 TEX12Q9BXU0 123 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 PRRG3Q9BZD7 231 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 NMNAT2Q9BZQ4 307 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 SRA1Q9HD15 236 aaKnown RBP6.76□□□□□ -1.33
MSH6-211ENST00000606499 B3GAT2Q9NPZ5 323 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 IMPAD1Q9NX62 359 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 ZNF226Q9NYT6 803 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 AASSQ9UDR5 926 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 UGT2A1Q9Y4X1 527 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 HCFC1P51610 2035 aa6.76□□□□□ -1.33
MSH6-211ENST00000606499 A0A1W2PPL8 197 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 RPL36A-HNRNPH2H7BZ11 118 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 DHHO43323 396 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 TLX2O43763 284 aaPredicted RBP6.75□□□□□ -1.33
MSH6-211ENST00000606499 AHCYL1O43865 530 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 RAD51DO75771 328 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 MPZL1O95297 269 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 CLDN14O95500 239 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 CNOT4O95628 575 aaKnown RBP6.75□□□□□ -1.33
MSH6-211ENST00000606499 NR2C1P13056 603 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 B4GALT1P15291 398 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 SPI1P17947 270 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 PAICSP22234 425 aaKnown RBP6.75□□□□□ -1.33
MSH6-211ENST00000606499 MPGP29372 298 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 ZNF84P51523 738 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 ZNF133P52736 654 aaPredicted RBP6.75□□□□□ -1.33
MSH6-211ENST00000606499 ARF1P84077 181 aaKnown RBP6.75□□□□□ -1.33
MSH6-211ENST00000606499 EFNB1P98172 346 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 TFF3Q07654 80 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 FAM27E3Q08E93 113 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 KEAP1Q14145 624 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 HIKESHIQ53FT3 197 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 THEM4Q5T1C6 240 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 ZNF691Q5VV52 312 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 TTC23Q5W5X9 447 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 XKRXQ6PP77 449 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 KLHL24Q6TFL4 600 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 B3GLCTQ6Y288 498 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 STAC2Q6ZMT1 411 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 ABHD12BQ7Z5M8 362 aaPredicted RBP6.75□□□□□ -1.33
MSH6-211ENST00000606499 ZBTB46Q86UZ6 589 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 ZNF433Q8N7K0 673 aaPredicted RBP6.75□□□□□ -1.33
MSH6-211ENST00000606499 PROKR2Q8NFJ6 384 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 FNDC8Q8TC99 324 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 TFAP2CQ92754 450 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 PTP4A1Q93096 173 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 MUS81Q96NY9 551 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 RBP7Q96R05 134 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 SNX18Q96RF0 628 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 ZNF184Q99676 751 aaPredicted RBP6.75□□□□□ -1.33
MSH6-211ENST00000606499 NELFAQ9H3P2 528 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 RASSF1Q9NS23 344 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 TAS2R16Q9NYV7 291 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 DNAJC27Q9NZQ0 273 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 B9D1Q9UPM9 204 aa6.75□□□□□ -1.33
MSH6-211ENST00000606499 COA3Q9Y2R0 106 aaPredicted RBP6.75□□□□□ -1.33
MSH6-211ENST00000606499 MYO7BQ6PIF6 2116 aa6.74□□□□□ -1.33
MSH6-211ENST00000606499 A0A096LPE4 126 aa6.74□□□□□ -1.33
MSH6-211ENST00000606499 A0A1W2PPZ6 126 aa6.74□□□□□ -1.33
MSH6-211ENST00000606499 CIB4A0PJX0 185 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms