RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 MARS2Q96GW9 593 aaKnown RBP3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 RBM18Q96H35 190 aaKnown RBP3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 SCLYQ96I15 445 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 PRRC1Q96M27 445 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 ZNF558Q96NG5 402 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 FCRL4Q96PJ5 515 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 ZNF385AQ96PM9 386 aaKnown RBP3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 CLCC1Q96S66 551 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 CCNL2Q96S94 520 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 PKP4Q99569 1192 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 ADAM2Q99965 735 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 ACBD6Q9BR61 282 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 NDC1Q9BTX1 674 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 ALG8Q9BVK2 526 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 FNDC11Q9BVV2 318 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 SCRT1Q9BWW7 348 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 RSPO3Q9BXY4 272 aaPredicted RBP3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 SLC17A9Q9BYT1 436 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 CIPCQ9C0C6 399 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 ABCG8Q9H221 673 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 OR51V1Q9H2C8 321 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 SLCO5A1Q9H2Y9 848 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 RERGLQ9H628 205 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 CWH43Q9H720 699 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 TMEM185BQ9H7F4 350 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 RHOFQ9HBH0 211 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 BEX1Q9HBH7 125 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 APMAPQ9HDC9 416 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 TREM1Q9NP99 234 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 MYNNQ9NPC7 610 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 NRIP3Q9NQ35 241 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 STARD7Q9NQZ5 370 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 PARP11Q9NR21 331 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 SLC17A5Q9NRA2 495 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 CYTL1Q9NRR1 136 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 UBQLN4Q9NRR5 601 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 C2orf42Q9NWW7 574 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 MARCH5Q9NX47 278 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 TMEM161AQ9NX61 479 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 COMMD9Q9P000 198 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 DNAJB11Q9UBS4 358 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 LPAR3Q9UBY5 353 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 SHPKQ9UHJ6 478 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 STARD10Q9Y365 291 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 PCDHGA1Q9Y5H4 931 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 TNFRSF18Q9Y5U5 241 aa3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 YLPM1P49750 1951 aaKnown RBP3.69□□□□□ -1.82
HMGB1P50-201ENST00000605814 TTC3P53804 2025 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 MDC1Q14676 2089 aaKnown RBP3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 A0A087WUU8 490 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 A0A087WWC5 75 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 TMEM272A0A1B0GTI8 110 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 A0A1B0GVC2 190 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 TMEM269A0A1B0GVZ9 245 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 DAPL1A0PJW8 107 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 MYBPHLA2RUH7 354 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 TBC1D3BA6NDS4 549 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 MGAT4DA6NG13 374 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 URADA6NGE7 173 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 TVP23AA6NH52 213 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 A6NIN4 97 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 OR6C76A6NM76 312 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 IFITM5A6NNB3 132 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 E7EQ34 232 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 F5H0A9 414 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 GOSR2O14653 212 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 ITGB1BP1O14713 200 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 SIGLEC5O15389 551 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 KDELR3O43731 214 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 BRINP1O60477 761 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 TLR5O60602 858 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 PLGP00747 810 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 MBP02144 154 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 AMY2AP04746 511 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 ANXA4P09525 319 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 AKAIN1P0CW23 69 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 OR8G3PP0DMU2 310 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 ALPPL2P10696 532 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 CKBP12277 381 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 SRMP19623 302 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 AMY2BP19961 511 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 MAOAP21397 527 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 HTR2CP28335 458 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 GABRR2P28476 465 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 OR1E1P30953 314 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 ATP6V1E1P36543 226 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 FRKP42685 505 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 OMPP47874 163 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 SULT1A2P50226 295 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 PRKXP51817 358 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 LUMP51884 338 aaPredicted RBP3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 F2RL1P55085 397 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 SOX8P57073 446 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 OR10A3P58181 314 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 PFN3P60673 137 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 RPS11P62280 158 aaKnown RBP eCLIP3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 LSM6P62312 80 aaKnown RBP3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 ACTC1P68032 377 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 ACTA1P68133 377 aa3.68□□□□□ -1.82
HMGB1P50-201ENST00000605814 DLK1P80370 383 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms