RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 GPR139Q6DWJ6 353 aa10.02□□□□□ -0.81
CCDC12-209ENST00000604164 CLEC2AQ6UVW9 174 aa10.02□□□□□ -0.81
CCDC12-209ENST00000604164 UNQ6126/PRO20091Q6UXV3 157 aa10.02□□□□□ -0.81
CCDC12-209ENST00000604164 SKA3Q8IX90 412 aa10.02□□□□□ -0.81
CCDC12-209ENST00000604164 OR4K5Q8NGD3 323 aa10.02□□□□□ -0.81
CCDC12-209ENST00000604164 OR13C2Q8NGS9 318 aa10.02□□□□□ -0.81
CCDC12-209ENST00000604164 FBXO17Q96EF6 278 aa10.02□□□□□ -0.81
CCDC12-209ENST00000604164 DHRS1Q96LJ7 313 aa10.02□□□□□ -0.81
CCDC12-209ENST00000604164 TNFRSF13CQ96RJ3 184 aa10.02□□□□□ -0.81
CCDC12-209ENST00000604164 KCNK17Q96T54 332 aa10.02□□□□□ -0.81
CCDC12-209ENST00000604164 SIAEQ9HAT2 523 aa10.02□□□□□ -0.81
CCDC12-209ENST00000604164 MYOZ1Q9NP98 299 aaPredicted RBP10.02□□□□□ -0.81
CCDC12-209ENST00000604164 CCNB1IP1Q9NPC3 277 aa10.02□□□□□ -0.81
CCDC12-209ENST00000604164 IL1RAPQ9NPH3 570 aa10.02□□□□□ -0.81
CCDC12-209ENST00000604164 ACTR3BQ9P1U1 418 aa10.02□□□□□ -0.81
CCDC12-209ENST00000604164 SLC7A8Q9UHI5 535 aa10.02□□□□□ -0.81
CCDC12-209ENST00000604164 ADAM21Q9UKJ8 722 aa10.02□□□□□ -0.81
CCDC12-209ENST00000604164 ZNF346Q9UL40 294 aaKnown RBP10.02□□□□□ -0.81
CCDC12-209ENST00000604164 TMCC3Q9ULS5 477 aa10.02□□□□□ -0.81
CCDC12-209ENST00000604164 PRPF19Q9UMS4 504 aaKnown RBP10.02□□□□□ -0.81
CCDC12-209ENST00000604164 ITPR3Q14573 2671 aa10.02□□□□□ -0.81
CCDC12-209ENST00000604164 KRT36O76013 467 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 NDUFB2O95178 105 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 CD14P08571 375 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 CELA3BP08861 270 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 HOXB6P17509 224 aaKnown RBP10.01□□□□□ -0.81
CCDC12-209ENST00000604164 NR4A1P22736 598 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 CALCRP30988 508 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 GPR4P46093 362 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 SELENOVP59797 346 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 PCBD1P61457 104 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 VLDLRP98155 873 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 MYBPC1Q00872 1141 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 SPIBQ01892 262 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 RUNX1T1Q06455 604 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 SNTB2Q13425 540 aaKnown RBP10.01□□□□□ -0.81
CCDC12-209ENST00000604164 ADIPOQQ15848 244 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 SWI5Q1ZZU3 235 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 TBC1D28Q2M2D7 210 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 VHLLQ6RSH7 139 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 TBPL2Q6SJ96 375 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 CLEC9AQ6UXN8 241 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 WDFY1Q8IWB7 410 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 LINC00471Q8N535 108 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 ARIH2OSQ8N7S6 290 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 RBM15BQ8NDT2 890 aaKnown RBP10.01□□□□□ -0.81
CCDC12-209ENST00000604164 HDAC2Q92769 488 aaKnown RBP10.01□□□□□ -0.81
CCDC12-209ENST00000604164 WACQ9BTA9 647 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 RAB1BQ9H0U4 201 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 C1orf21Q9H246 121 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 PLK3Q9H4B4 646 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 NOX3Q9HBY0 568 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 CMAHPQ9Y471 501 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 V9GYQ6 96 aa10.01□□□□□ -0.81
CCDC12-209ENST00000604164 HEATR1Q9H583 2144 aaKnown RBP10.01□□□□□ -0.81
CCDC12-209ENST00000604164 SH3PXD2BA1X283 911 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 ZNF503-AS2A6NEH8 195 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 TRIM64A6NGJ6 449 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 TRIM64BA6NI03 449 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 UNC119BA6NIH7 251 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 CDC42EP2O14613 210 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 SMAD7O15105 426 aaKnown RBP10□□□□□ -0.81
CCDC12-209ENST00000604164 SSX4O60224 188 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 F12P00748 615 aaPredicted RBP10□□□□□ -0.81
CCDC12-209ENST00000604164 SEMG1P04279 462 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 HEXAP06865 529 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 ZNF35P13682 527 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 OMPP47874 163 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 EVX1P49640 407 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 PPOXP50336 477 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 RPS6KA3P51812 740 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 HSF2Q03933 536 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 HGFACQ04756 655 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 TNK1Q13470 666 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 RAB39AQ14964 217 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 DPY19L2P2Q6ZN68 376 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 TSEN54Q7Z6J9 526 aaKnown RBP10□□□□□ -0.81
CCDC12-209ENST00000604164 ADCK1Q86TW2 530 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 DHFR2Q86XF0 187 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 ZDHHC21Q8IVQ6 265 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 FAM86B1Q8N7N1 296 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 LRRC75AQ8NAA5 344 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 SLC30A7Q8NEW0 376 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 OR52J3Q8NH60 311 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 ZNF519Q8TB69 540 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 BCAS4Q8TDM0 211 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 NSMAFQ92636 917 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 FAM46AQ96IP4 442 aaKnown RBP10□□□□□ -0.81
CCDC12-209ENST00000604164 RSRC1Q96IZ7 334 aaKnown RBP10□□□□□ -0.81
CCDC12-209ENST00000604164 LRGUKQ96M69 825 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 ZNF75AQ96N20 296 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 ZNF570Q96NI8 536 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 TSPAN32Q96QS1 320 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 GPX7Q96SL4 187 aaPredicted RBP10□□□□□ -0.81
CCDC12-209ENST00000604164 SH3GL3Q99963 347 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 TRIM15Q9C019 465 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 MAGIXQ9H6Y5 334 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 CDH20Q9HBT6 801 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 ZNF224Q9NZL3 707 aa10□□□□□ -0.81
CCDC12-209ENST00000604164 GPR160Q9UJ42 338 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms