RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 NRIP3Q9NQ35 241 aa13.66□□□□□ -0.22
RPS28-203ENST00000600659 MTORP42345 2549 aa13.66□□□□□ -0.22
RPS28-203ENST00000600659 IGHV2OR16-5A0A0B4J2B6 119 aa13.65□□□□□ -0.22
RPS28-203ENST00000600659 H7C1C5 153 aa13.65□□□□□ -0.22
RPS28-203ENST00000600659 IMPA2O14732 288 aa13.65□□□□□ -0.22
RPS28-203ENST00000600659 ARR3P36575 388 aa13.65□□□□□ -0.22
RPS28-203ENST00000600659 CDKN1AP38936 164 aa13.65□□□□□ -0.22
RPS28-203ENST00000600659 GSSP48637 474 aa13.65□□□□□ -0.22
RPS28-203ENST00000600659 LCN6P62502 163 aa13.65□□□□□ -0.22
RPS28-203ENST00000600659 TRAP1Q12931 704 aaKnown RBP13.65□□□□□ -0.22
RPS28-203ENST00000600659 GSG1Q2KHT4 349 aa13.65□□□□□ -0.22
RPS28-203ENST00000600659 Q5PR19 223 aa13.65□□□□□ -0.22
RPS28-203ENST00000600659 C1orf94Q6P1W5 598 aa13.65□□□□□ -0.22
RPS28-203ENST00000600659 FOXL2NBQ6ZUU3 175 aa13.65□□□□□ -0.22
RPS28-203ENST00000600659 RRM2BQ7LG56 351 aa13.65□□□□□ -0.22
RPS28-203ENST00000600659 ADGRG5Q8IZF4 528 aa13.65□□□□□ -0.22
RPS28-203ENST00000600659 CDK20Q8IZL9 346 aa13.65□□□□□ -0.22
RPS28-203ENST00000600659 SH3GL3Q99963 347 aa13.65□□□□□ -0.22
RPS28-203ENST00000600659 MOV10Q9HCE1 1003 aaKnown RBP13.65□□□□□ -0.22
RPS28-203ENST00000600659 STX18Q9P2W9 335 aaKnown RBP13.65□□□□□ -0.22
RPS28-203ENST00000600659 NDUFS7O75251 213 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 NDUFB2O95178 105 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 MMP7P09237 267 aaPredicted RBP13.64□□□□□ -0.23
RPS28-203ENST00000600659 OR8G3PP0DMU2 310 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 FPR3P25089 353 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 CDAP32320 146 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 CAPZA2P47755 286 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 GIPRP48546 466 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 SMIM11AP58511 58 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 PIGFQ07326 219 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 CD47Q08722 323 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 NPRL3Q12980 569 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 MST1LQ2TV78 715 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 DNAL1Q4LDG9 190 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 SHEQ5VZ18 495 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 FAM205BPQ63HN1 556 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 ZNF544Q6NX49 715 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 PGBD2Q6P3X8 592 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 MUC15Q8N387 334 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 OR9Q2Q8NGE9 314 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 RASD2Q96D21 266 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 CADM1Q9BY67 442 aaKnown RBP13.64□□□□□ -0.23
RPS28-203ENST00000600659 CXorf56Q9H5V9 222 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 IL20RAQ9UHF4 553 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 POU2F3Q9UKI9 436 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 ATP23Q9Y6H3 246 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 UNC119BA6NIH7 251 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 GYG2O15488 501 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 MGRN1O60291 552 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 OR10H3O60404 316 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 UBL3O95164 117 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 TXNDC12O95881 172 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 CRYAAP02489 173 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 SCG5P05408 212 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 CD79AP11912 226 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 ZNF35P13682 527 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 RAB1AP62820 205 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 MRPS34P82930 218 aaKnown RBP13.64□□□□□ -0.23
RPS28-203ENST00000600659 PPP1R8Q12972 351 aaKnown RBP13.64□□□□□ -0.23
RPS28-203ENST00000600659 MSMPQ1L6U9 139 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 PRSS57Q6UWY2 283 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 PTCHD4Q6ZW05 846 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 NANOS1Q8WY41 292 aaKnown RBP13.64□□□□□ -0.23
RPS28-203ENST00000600659 GTPBP3Q969Y2 492 aaKnown RBP13.64□□□□□ -0.23
RPS28-203ENST00000600659 CA10Q9NS85 328 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 CBLN4Q9NTU7 201 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 AURKCQ9UQB9 309 aa13.64□□□□□ -0.23
RPS28-203ENST00000600659 CR1P17927 2039 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 TEX13CA0A0J9YWL9 993 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 SLC22A23A1A5C7 686 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 A6NIZ1 184 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 AQP12BA6NM10 295 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 GSC2O15499 205 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 ARHGEF9O43307 516 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 KRT36O76013 467 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 SDHAP31040 664 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 RPL4P36578 427 aaKnown RBP13.63□□□□□ -0.23
RPS28-203ENST00000600659 PTDSS1P48651 473 aaKnown RBP13.63□□□□□ -0.23
RPS28-203ENST00000600659 ZNF84P51523 738 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 RAP1BP61224 184 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 RAP1AP62834 184 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 KRR1Q13601 381 aaKnown RBP13.63□□□□□ -0.23
RPS28-203ENST00000600659 RAB39AQ14964 217 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 ADIPOQQ15848 244 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 ETFDHQ16134 617 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 SWI5Q1ZZU3 235 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 THEM4Q5T1C6 240 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 SMARCD3Q6STE5 483 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 ZNF620Q6ZNG0 422 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 YTHDF3Q7Z739 585 aaKnown RBP13.63□□□□□ -0.23
RPS28-203ENST00000600659 AQP12AQ8IXF9 295 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 DEPDC4Q8N2C3 294 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 NUP37Q8NFH4 326 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 CANT1Q8WVQ1 401 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 NSMAFQ92636 917 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 ZNF570Q96NI8 536 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 TRIM15Q9C019 465 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 OR52D1Q9H346 318 aa13.63□□□□□ -0.23
RPS28-203ENST00000600659 DENND2DQ9H6A0 471 aaPredicted RBP13.63□□□□□ -0.23
RPS28-203ENST00000600659 FAIMQ9NVQ4 179 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms