RNA–Protein interactions for RNA: ENST00000600552.5

SHKBP1-223, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-223ENST00000600552 RBM15BQ8NDT2 890 aaKnown RBP15.06■□□□□ 0
SHKBP1-223ENST00000600552 SNX33Q8WV41 574 aa15.06■□□□□ 0
SHKBP1-223ENST00000600552 C11orf40Q8WZ69 217 aa15.06■□□□□ 0
SHKBP1-223ENST00000600552 MCHR2Q969V1 340 aa15.06■□□□□ 0
SHKBP1-223ENST00000600552 FAHD2AQ96GK7 314 aa15.06■□□□□ 0
SHKBP1-223ENST00000600552 MPP4Q96JB8 637 aa15.06■□□□□ 0
SHKBP1-223ENST00000600552 MAGEB18Q96M61 343 aa15.06■□□□□ 0
SHKBP1-223ENST00000600552 LRMDAQ9H2I8 198 aa15.06■□□□□ 0
SHKBP1-223ENST00000600552 NANOGQ9H9S0 305 aa15.06■□□□□ 0
SHKBP1-223ENST00000600552 HINT3Q9NQE9 182 aaKnown RBP15.06■□□□□ 0
SHKBP1-223ENST00000600552 IQCMA0A1B0GVH7 501 aa15.05■□□□□ -0
SHKBP1-223ENST00000600552 DRD4P21917 467 aa15.05■□□□□ -0
SHKBP1-223ENST00000600552 KLF3P57682 345 aaPredicted RBP15.05■□□□□ -0
SHKBP1-223ENST00000600552 RPL18Q07020 188 aaKnown RBP15.05■□□□□ -0
SHKBP1-223ENST00000600552 SGCAQ16586 387 aa15.05■□□□□ -0
SHKBP1-223ENST00000600552 TSTQ16762 297 aaKnown RBP15.05■□□□□ -0
SHKBP1-223ENST00000600552 VMACQ2NL98 169 aa15.05■□□□□ -0
SHKBP1-223ENST00000600552 NKAIN4Q8IVV8 208 aa15.05■□□□□ -0
SHKBP1-223ENST00000600552 OR1J2Q8NGS2 313 aa15.05■□□□□ -0
SHKBP1-223ENST00000600552 NSMAFQ92636 917 aa15.05■□□□□ -0
SHKBP1-223ENST00000600552 GTF3AQ92664 365 aaKnown RBP15.05■□□□□ -0
SHKBP1-223ENST00000600552 TMEM186Q96B77 213 aa15.05■□□□□ -0
SHKBP1-223ENST00000600552 LRRC37BQ96QE4 947 aa15.05■□□□□ -0
SHKBP1-223ENST00000600552 PRSS27Q9BQR3 290 aa15.05■□□□□ -0
SHKBP1-223ENST00000600552 KCNN2Q9H2S1 579 aa15.05■□□□□ -0
SHKBP1-223ENST00000600552 MEPEQ9NQ76 525 aaPredicted RBP15.05■□□□□ -0
SHKBP1-223ENST00000600552 GPR160Q9UJ42 338 aa15.05■□□□□ -0
SHKBP1-223ENST00000600552 NBEAL1Q6ZS30 2694 aa15.04■□□□□ -0
SHKBP1-223ENST00000600552 SLC22A23A1A5C7 686 aa15.04■□□□□ -0
SHKBP1-223ENST00000600552 TRMUO75648 421 aaKnown RBP15.04■□□□□ -0
SHKBP1-223ENST00000600552 SLC2A10O95528 541 aa15.04■□□□□ -0
SHKBP1-223ENST00000600552 VIMP08670 466 aaKnown RBP15.04■□□□□ -0
SHKBP1-223ENST00000600552 ASAH2BP0C7U1 165 aa15.04■□□□□ -0
SHKBP1-223ENST00000600552 GAAP10253 952 aa15.04■□□□□ -0
SHKBP1-223ENST00000600552 CDAP32320 146 aa15.04■□□□□ -0
SHKBP1-223ENST00000600552 APLNRP35414 380 aa15.04■□□□□ -0
SHKBP1-223ENST00000600552 UGT2B15P54855 530 aa15.04■□□□□ -0
SHKBP1-223ENST00000600552 TMEM33P57088 247 aa15.04■□□□□ -0
SHKBP1-223ENST00000600552 TOP3AQ13472 1001 aaPredicted RBP15.04■□□□□ -0
SHKBP1-223ENST00000600552 CYLC2Q14093 348 aaPredicted RBP15.04■□□□□ -0
SHKBP1-223ENST00000600552 MMEL1Q495T6 779 aa15.04■□□□□ -0
SHKBP1-223ENST00000600552 RABL3Q5HYI8 236 aa15.04■□□□□ -0
SHKBP1-223ENST00000600552 SPATA46Q5T0L3 261 aa15.04■□□□□ -0
SHKBP1-223ENST00000600552 NANOGP8Q6NSW7 305 aa15.04■□□□□ -0
SHKBP1-223ENST00000600552 MOSPD2Q8NHP6 518 aa15.04■□□□□ -0
SHKBP1-223ENST00000600552 TMEM255BQ8WV15 326 aa15.04■□□□□ -0
SHKBP1-223ENST00000600552 SGTBQ96EQ0 304 aa15.04■□□□□ -0
SHKBP1-223ENST00000600552 ECSITQ9BQ95 431 aa15.04■□□□□ -0
SHKBP1-223ENST00000600552 ZNF385DQ9H6B1 395 aa15.04■□□□□ -0
SHKBP1-223ENST00000600552 CCNB1IP1Q9NPC3 277 aa15.04■□□□□ -0
SHKBP1-223ENST00000600552 INIPQ9NRY2 104 aa15.04■□□□□ -0
SHKBP1-223ENST00000600552 GRIP1Q9Y3R0 1128 aa15.04■□□□□ -0
SHKBP1-223ENST00000600552 C17orf100A8MU93 164 aa15.03■□□□□ -0
SHKBP1-223ENST00000600552 OR7A10O76100 309 aa15.03■□□□□ -0
SHKBP1-223ENST00000600552 PTHP01270 115 aa15.03■□□□□ -0
SHKBP1-223ENST00000600552 MSMBP08118 114 aa15.03■□□□□ -0
SHKBP1-223ENST00000600552 ACADSP16219 412 aa15.03■□□□□ -0
SHKBP1-223ENST00000600552 RAD52P43351 418 aa15.03■□□□□ -0
SHKBP1-223ENST00000600552 OR1E2P47887 323 aa15.03■□□□□ -0
SHKBP1-223ENST00000600552 UCP2P55851 309 aa15.03■□□□□ -0
SHKBP1-223ENST00000600552 PIN1Q13526 163 aaPredicted RBP15.03■□□□□ -0
SHKBP1-223ENST00000600552 LAPTM4AQ15012 233 aa15.03■□□□□ -0
SHKBP1-223ENST00000600552 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.03■□□□□ -0
SHKBP1-223ENST00000600552 NOXO1Q8NFA2 376 aa15.03■□□□□ -0
SHKBP1-223ENST00000600552 OR1J1Q8NGS3 322 aa15.03■□□□□ -0
SHKBP1-223ENST00000600552 OR51F2Q8NH61 342 aa15.03■□□□□ -0
SHKBP1-223ENST00000600552 ZNF519Q8TB69 540 aa15.03■□□□□ -0
SHKBP1-223ENST00000600552 RASSF5Q8WWW0 418 aa15.03■□□□□ -0
SHKBP1-223ENST00000600552 ASB10Q8WXI3 467 aa15.03■□□□□ -0
SHKBP1-223ENST00000600552 ZNF416Q9BWM5 594 aa15.03■□□□□ -0
SHKBP1-223ENST00000600552 SLC19A3Q9BZV2 496 aa15.03■□□□□ -0
SHKBP1-223ENST00000600552 C20orf141Q9NUB4 165 aa15.03■□□□□ -0
SHKBP1-223ENST00000600552 DECR2Q9NUI1 292 aa15.03■□□□□ -0
SHKBP1-223ENST00000600552 RIMS3Q9UJD0 308 aa15.03■□□□□ -0
SHKBP1-223ENST00000600552 FBP2O00757 339 aa15.02■□□□□ -0
SHKBP1-223ENST00000600552 PIP5K1CO60331 668 aa15.02■□□□□ -0
SHKBP1-223ENST00000600552 TFP02787 698 aa15.02■□□□□ -0
SHKBP1-223ENST00000600552 MT-ND1P03886 318 aa15.02■□□□□ -0
SHKBP1-223ENST00000600552 GZMMP51124 257 aa15.02■□□□□ -0
SHKBP1-223ENST00000600552 CRYBA2P53672 197 aa15.02■□□□□ -0
SHKBP1-223ENST00000600552 FMODQ06828 376 aa15.02■□□□□ -0
SHKBP1-223ENST00000600552 CD47Q08722 323 aa15.02■□□□□ -0
SHKBP1-223ENST00000600552 PABPC1L2AQ5JQF8 200 aa15.02■□□□□ -0
SHKBP1-223ENST00000600552 C12orf54Q6X4T0 127 aa15.02■□□□□ -0
SHKBP1-223ENST00000600552 MEX3DQ86XN8 651 aaKnown RBP15.02■□□□□ -0
SHKBP1-223ENST00000600552 AKR7LQ8NHP1 331 aa15.02■□□□□ -0
SHKBP1-223ENST00000600552 TMEM239Q8WW34 195 aa15.02■□□□□ -0
SHKBP1-223ENST00000600552 C1orf198Q9H425 327 aa15.02■□□□□ -0
SHKBP1-223ENST00000600552 SLCO1C1Q9NYB5 712 aa15.02■□□□□ -0
SHKBP1-223ENST00000600552 HMGB1P1B2RPK0 211 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-223ENST00000600552 SPRY3O43610 288 aa15.01□□□□□ -0.01
SHKBP1-223ENST00000600552 EDF1O60869 148 aaKnown RBP15.01□□□□□ -0.01
SHKBP1-223ENST00000600552 RP2O75695 350 aa15.01□□□□□ -0.01
SHKBP1-223ENST00000600552 VENTXO95231 258 aa15.01□□□□□ -0.01
SHKBP1-223ENST00000600552 ZNF250P15622 560 aa15.01□□□□□ -0.01
SHKBP1-223ENST00000600552 DAP3P51398 398 aaKnown RBP15.01□□□□□ -0.01
SHKBP1-223ENST00000600552 LMO4P61968 165 aa15.01□□□□□ -0.01
SHKBP1-223ENST00000600552 LRRC23Q53EV4 343 aaPredicted RBP15.01□□□□□ -0.01
SHKBP1-223ENST00000600552 USP51Q70EK9 711 aa15.01□□□□□ -0.01
SHKBP1-223ENST00000600552 DPPA2Q7Z7J5 298 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms