RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 UBR5O95071 2799 aaPredicted RBP17.58■□□□□ 0.4
SHKBP1-222ENST00000600320 FAM183AA6NL82 134 aa17.57■□□□□ 0.4
SHKBP1-222ENST00000600320 RIIAD1A6NNX1 92 aa17.57■□□□□ 0.4
SHKBP1-222ENST00000600320 SLC16A7O60669 478 aa17.57■□□□□ 0.4
SHKBP1-222ENST00000600320 IFNGP01579 166 aa17.57■□□□□ 0.4
SHKBP1-222ENST00000600320 UGT2B10P36537 528 aa17.57■□□□□ 0.4
SHKBP1-222ENST00000600320 PTDSS1P48651 473 aaKnown RBP17.57■□□□□ 0.4
SHKBP1-222ENST00000600320 BHLHA15Q7RTS1 189 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-222ENST00000600320 OR6V1Q8N148 313 aa17.57■□□□□ 0.4
SHKBP1-222ENST00000600320 OR9Q1Q8NGQ5 310 aa17.57■□□□□ 0.4
SHKBP1-222ENST00000600320 OR1K1Q8NGR3 316 aa17.57■□□□□ 0.4
SHKBP1-222ENST00000600320 FNDC8Q8TC99 324 aa17.57■□□□□ 0.4
SHKBP1-222ENST00000600320 KISS1RQ969F8 398 aaPredicted RBP17.57■□□□□ 0.4
SHKBP1-222ENST00000600320 RDH12Q96NR8 316 aa17.57■□□□□ 0.4
SHKBP1-222ENST00000600320 HCAR1Q9BXC0 346 aa17.57■□□□□ 0.4
SHKBP1-222ENST00000600320 MED20Q9H944 212 aa17.57■□□□□ 0.4
SHKBP1-222ENST00000600320 FAM118AQ9NWS6 357 aa17.57■□□□□ 0.4
SHKBP1-222ENST00000600320 IGLV1-36A0A0B4J1U3 117 aa17.56■□□□□ 0.4
SHKBP1-222ENST00000600320 CIB4A0PJX0 185 aa17.56■□□□□ 0.4
SHKBP1-222ENST00000600320 A1L4Q6 167 aa17.56■□□□□ 0.4
SHKBP1-222ENST00000600320 C16orf97H3BN30 126 aa17.56■□□□□ 0.4
SHKBP1-222ENST00000600320 PRKYO43930 277 aa17.56■□□□□ 0.4
SHKBP1-222ENST00000600320 CLDN1O95832 211 aa17.56■□□□□ 0.4
SHKBP1-222ENST00000600320 CLUP10909 449 aa17.56■□□□□ 0.4
SHKBP1-222ENST00000600320 ZNF3P17036 446 aa17.56■□□□□ 0.4
SHKBP1-222ENST00000600320 CDAP32320 146 aa17.56■□□□□ 0.4
SHKBP1-222ENST00000600320 PCYT1AP49585 367 aa17.56■□□□□ 0.4
SHKBP1-222ENST00000600320 EFNB1P98172 346 aa17.56■□□□□ 0.4
SHKBP1-222ENST00000600320 STK11Q15831 433 aa17.56■□□□□ 0.4
SHKBP1-222ENST00000600320 GABRA6Q16445 453 aa17.56■□□□□ 0.4
SHKBP1-222ENST00000600320 SNAPC1Q16533 368 aa17.56■□□□□ 0.4
SHKBP1-222ENST00000600320 C22orf34Q6ZV56 151 aa17.56■□□□□ 0.4
SHKBP1-222ENST00000600320 ZNRF4Q8WWF5 429 aa17.56■□□□□ 0.4
SHKBP1-222ENST00000600320 BCL2L2Q92843 193 aaPredicted RBP17.56■□□□□ 0.4
SHKBP1-222ENST00000600320 HRASLS5Q96KN8 279 aa17.56■□□□□ 0.4
SHKBP1-222ENST00000600320 FOXN4Q96NZ1 517 aa17.56■□□□□ 0.4
SHKBP1-222ENST00000600320 PITX2Q99697 317 aa17.56■□□□□ 0.4
SHKBP1-222ENST00000600320 FOXB1Q99853 325 aa17.56■□□□□ 0.4
SHKBP1-222ENST00000600320 NMNAT2Q9BZQ4 307 aa17.56■□□□□ 0.4
SHKBP1-222ENST00000600320 RERGLQ9H628 205 aa17.56■□□□□ 0.4
SHKBP1-222ENST00000600320 SRA1Q9HD15 236 aaKnown RBP17.56■□□□□ 0.4
SHKBP1-222ENST00000600320 HINT3Q9NQE9 182 aaKnown RBP17.56■□□□□ 0.4
SHKBP1-222ENST00000600320 TMEM38BQ9NVV0 291 aa17.56■□□□□ 0.4
SHKBP1-222ENST00000600320 B9D1Q9UPM9 204 aa17.56■□□□□ 0.4
SHKBP1-222ENST00000600320 A0A096LPE4 126 aa17.55■□□□□ 0.4
SHKBP1-222ENST00000600320 A0A1W2PPZ6 126 aa17.55■□□□□ 0.4
SHKBP1-222ENST00000600320 FAM171A2A8MVW0 826 aa17.55■□□□□ 0.4
SHKBP1-222ENST00000600320 ZNF99A8MXY4 864 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-222ENST00000600320 KHDRBS3O75525 346 aaKnown RBP17.55■□□□□ 0.4
SHKBP1-222ENST00000600320 GPANK1O95872 356 aa17.55■□□□□ 0.4
SHKBP1-222ENST00000600320 NR2C1P13056 603 aa17.55■□□□□ 0.4
SHKBP1-222ENST00000600320 IL32P24001 234 aa17.55■□□□□ 0.4
SHKBP1-222ENST00000600320 PYCR1P32322 319 aa17.55■□□□□ 0.4
SHKBP1-222ENST00000600320 GGT2P36268 569 aa17.55■□□□□ 0.4
SHKBP1-222ENST00000600320 OTPQ5XKR4 325 aa17.55■□□□□ 0.4
SHKBP1-222ENST00000600320 PLBD1Q6P4A8 553 aa17.55■□□□□ 0.4
SHKBP1-222ENST00000600320 KLHL24Q6TFL4 600 aa17.55■□□□□ 0.4
SHKBP1-222ENST00000600320 FOXL2NBQ6ZUU3 175 aa17.55■□□□□ 0.4
SHKBP1-222ENST00000600320 TCEANCQ8N8B7 351 aa17.55■□□□□ 0.4
SHKBP1-222ENST00000600320 PTP4A1Q93096 173 aa17.55■□□□□ 0.4
SHKBP1-222ENST00000600320 UBE2FQ969M7 185 aa17.55■□□□□ 0.4
SHKBP1-222ENST00000600320 S100PBPQ96BU1 408 aa17.55■□□□□ 0.4
SHKBP1-222ENST00000600320 LRRC46Q96FV0 321 aa17.55■□□□□ 0.4
SHKBP1-222ENST00000600320 MUS81Q96NY9 551 aa17.55■□□□□ 0.4
SHKBP1-222ENST00000600320 SLC38A2Q96QD8 506 aa17.55■□□□□ 0.4
SHKBP1-222ENST00000600320 TEX12Q9BXU0 123 aa17.55■□□□□ 0.4
SHKBP1-222ENST00000600320 ACTR6Q9GZN1 396 aa17.55■□□□□ 0.4
SHKBP1-222ENST00000600320 NDRG4Q9ULP0 352 aaKnown RBP17.55■□□□□ 0.4
SHKBP1-222ENST00000600320 COA3Q9Y2R0 106 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-222ENST00000600320 FKBP7Q9Y680 259 aa17.55■□□□□ 0.4
SHKBP1-222ENST00000600320 SPTBN1Q01082 2364 aaKnown RBP17.54■□□□□ 0.4
SHKBP1-222ENST00000600320 USP9XQ93008 2570 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-222ENST00000600320 SLC16A6O15403 523 aa17.54■□□□□ 0.4
SHKBP1-222ENST00000600320 SCG5P05408 212 aa17.54■□□□□ 0.4
SHKBP1-222ENST00000600320 GYPBP06028 91 aa17.54■□□□□ 0.4
SHKBP1-222ENST00000600320 B4GALT1P15291 398 aa17.54■□□□□ 0.4
SHKBP1-222ENST00000600320 ZNF84P51523 738 aa17.54■□□□□ 0.4
SHKBP1-222ENST00000600320 SLC25A1P53007 311 aa17.54■□□□□ 0.4
SHKBP1-222ENST00000600320 AQP4P55087 323 aa17.54■□□□□ 0.4
SHKBP1-222ENST00000600320 SH3BGRP55822 239 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-222ENST00000600320 TBRG1Q3YBR2 411 aa17.54■□□□□ 0.4
SHKBP1-222ENST00000600320 HIKESHIQ53FT3 197 aa17.54■□□□□ 0.4
SHKBP1-222ENST00000600320 ZNF813Q6ZN06 617 aa17.54■□□□□ 0.4
SHKBP1-222ENST00000600320 ZNF627Q7L945 461 aa17.54■□□□□ 0.4
SHKBP1-222ENST00000600320 ZBTB46Q86UZ6 589 aa17.54■□□□□ 0.4
SHKBP1-222ENST00000600320 CPOQ8IVL8 374 aa17.54■□□□□ 0.4
SHKBP1-222ENST00000600320 WDR31Q8NA23 367 aa17.54■□□□□ 0.4
SHKBP1-222ENST00000600320 C1orf162Q8NEQ5 155 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-222ENST00000600320 FAM81AQ8TBF8 368 aa17.54■□□□□ 0.4
SHKBP1-222ENST00000600320 NABP1Q96AH0 204 aa17.54■□□□□ 0.4
SHKBP1-222ENST00000600320 PLEKHA8Q96JA3 519 aa17.54■□□□□ 0.4
SHKBP1-222ENST00000600320 IL4I1Q96RQ9 567 aa17.54■□□□□ 0.4
SHKBP1-222ENST00000600320 HDHD5Q9BXW7 423 aa17.54■□□□□ 0.4
SHKBP1-222ENST00000600320 GMPPBQ9Y5P6 360 aa17.54■□□□□ 0.4
SHKBP1-222ENST00000600320 KLF2Q9Y5W3 355 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-222ENST00000600320 DOPEY1Q5JWR5 2465 aa17.53■□□□□ 0.4
SHKBP1-222ENST00000600320 LOC100130705A0A1B0GUX0 176 aa17.53■□□□□ 0.4
SHKBP1-222ENST00000600320 A0A1W2PPL8 197 aa17.53■□□□□ 0.4
SHKBP1-222ENST00000600320 A0A1W2PR80 420 aa17.53■□□□□ 0.4
SHKBP1-222ENST00000600320 PRSS44E7EML9 344 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms