RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 DCTN6O00399 190 aa12□□□□□ -0.49
VRK3-219ENST00000600137 SOCS2O14508 198 aa12□□□□□ -0.49
VRK3-219ENST00000600137 IDH3BO43837 385 aa12□□□□□ -0.49
VRK3-219ENST00000600137 AHCYL1O43865 530 aa12□□□□□ -0.49
VRK3-219ENST00000600137 SOX14O95416 240 aa12□□□□□ -0.49
VRK3-219ENST00000600137 RPS6KA3P51812 740 aa12□□□□□ -0.49
VRK3-219ENST00000600137 TLE4Q04727 773 aa12□□□□□ -0.49
VRK3-219ENST00000600137 KRR1Q13601 381 aaKnown RBP12□□□□□ -0.49
VRK3-219ENST00000600137 PPA1Q15181 289 aa12□□□□□ -0.49
VRK3-219ENST00000600137 SLC36A3Q495N2 470 aa12□□□□□ -0.49
VRK3-219ENST00000600137 CLEC12AQ5QGZ9 265 aa12□□□□□ -0.49
VRK3-219ENST00000600137 C1QTNF12Q5T7M4 302 aa12□□□□□ -0.49
VRK3-219ENST00000600137 KDM4DQ6B0I6 523 aa12□□□□□ -0.49
VRK3-219ENST00000600137 ACSM5Q6NUN0 579 aa12□□□□□ -0.49
VRK3-219ENST00000600137 RPL13AP3Q6NVV1 102 aa12□□□□□ -0.49
VRK3-219ENST00000600137 KLHL24Q6TFL4 600 aa12□□□□□ -0.49
VRK3-219ENST00000600137 HDDC2Q7Z4H3 204 aa12□□□□□ -0.49
VRK3-219ENST00000600137 HIPK1Q86Z02 1210 aa12□□□□□ -0.49
VRK3-219ENST00000600137 SKA3Q8IX90 412 aa12□□□□□ -0.49
VRK3-219ENST00000600137 NPEPL1Q8NDH3 523 aa12□□□□□ -0.49
VRK3-219ENST00000600137 NABP1Q96AH0 204 aa12□□□□□ -0.49
VRK3-219ENST00000600137 RBP7Q96R05 134 aa12□□□□□ -0.49
VRK3-219ENST00000600137 TMEM204Q9BSN7 226 aa12□□□□□ -0.49
VRK3-219ENST00000600137 IFT27Q9BW83 186 aa12□□□□□ -0.49
VRK3-219ENST00000600137 TSSK6Q9BXA6 273 aa12□□□□□ -0.49
VRK3-219ENST00000600137 NOX3Q9HBY0 568 aa12□□□□□ -0.49
VRK3-219ENST00000600137 ZNF226Q9NYT6 803 aa12□□□□□ -0.49
VRK3-219ENST00000600137 POFUT2Q9Y2G5 429 aa12□□□□□ -0.49
VRK3-219ENST00000600137 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.99□□□□□ -0.49
VRK3-219ENST00000600137 OR6C68A6NDL8 312 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 G3V2T6 193 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 CASKO14936 926 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 MITFO75030 526 aaPredicted RBP11.99□□□□□ -0.49
VRK3-219ENST00000600137 OSMP13725 252 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 B4GALT1P15291 398 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 CTLA4P16410 223 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 SSTR2P30874 369 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 CDAP32320 146 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 GIPRP48546 466 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 TUBA1BP68363 451 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 TUBA4AP68366 448 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 MRPS34P82930 218 aaKnown RBP11.99□□□□□ -0.49
VRK3-219ENST00000600137 PPP2R2BQ00005 443 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 CDK5Q00535 292 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 CD47Q08722 323 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 SLC35F1Q5T1Q4 408 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 NCMAPQ5T1S8 102 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 ZNF813Q6ZN06 617 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 TUBA1AQ71U36 451 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 SLC22A24Q8N4F4 322 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 OR4K13Q8NH42 304 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 FNDC8Q8TC99 324 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 MUCL1Q96DR8 90 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 TSSK2Q96PF2 358 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 SNX18Q96RF0 628 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 NMNAT3Q96T66 252 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 C1QTNF6Q9BXI9 259 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 SYT4Q9H2B2 425 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 OBP2BQ9NPH6 170 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 CRNNQ9UBG3 495 aaPredicted RBP11.99□□□□□ -0.49
VRK3-219ENST00000600137 OAZ3Q9UMX2 235 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 AMDHD2Q9Y303 409 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 PLCE1Q9P212 2302 aa11.99□□□□□ -0.49
VRK3-219ENST00000600137 CSMD1Q96PZ7 3565 aa11.98□□□□□ -0.49
VRK3-219ENST00000600137 RAI1Q7Z5J4 1906 aaPredicted RBP11.98□□□□□ -0.49
VRK3-219ENST00000600137 GOSR1O95249 250 aa11.98□□□□□ -0.49
VRK3-219ENST00000600137 PLAUP00749 431 aa11.98□□□□□ -0.49
VRK3-219ENST00000600137 IGLV1-44P01699 117 aa11.98□□□□□ -0.49
VRK3-219ENST00000600137 EPHA2P29317 976 aa11.98□□□□□ -0.49
VRK3-219ENST00000600137 ARHGDIAP52565 204 aa11.98□□□□□ -0.49
VRK3-219ENST00000600137 NRN1LQ496H8 165 aa11.98□□□□□ -0.49
VRK3-219ENST00000600137 BEX5Q5H9J7 111 aa11.98□□□□□ -0.49
VRK3-219ENST00000600137 SSX8Q7RTT4 187 aa11.98□□□□□ -0.49
VRK3-219ENST00000600137 ADCK1Q86TW2 530 aa11.98□□□□□ -0.49
VRK3-219ENST00000600137 MYPOPQ86VE0 399 aaPredicted RBP11.98□□□□□ -0.49
VRK3-219ENST00000600137 ZDHHC13Q8IUH4 622 aa11.98□□□□□ -0.49
VRK3-219ENST00000600137 C10orf67Q8IYJ2 551 aa11.98□□□□□ -0.49
VRK3-219ENST00000600137 OR6V1Q8N148 313 aa11.98□□□□□ -0.49
VRK3-219ENST00000600137 PARP8Q8N3A8 854 aa11.98□□□□□ -0.49
VRK3-219ENST00000600137 SVOPLQ8N434 492 aa11.98□□□□□ -0.49
VRK3-219ENST00000600137 IQCF1Q8N6M8 205 aa11.98□□□□□ -0.49
VRK3-219ENST00000600137 FAM169BQ8N8A8 192 aa11.98□□□□□ -0.49
VRK3-219ENST00000600137 ATG16L2Q8NAA4 619 aa11.98□□□□□ -0.49
VRK3-219ENST00000600137 LILRB1Q8NHL6 650 aaPredicted RBP11.98□□□□□ -0.49
VRK3-219ENST00000600137 ZNRF4Q8WWF5 429 aa11.98□□□□□ -0.49
VRK3-219ENST00000600137 NSMAFQ92636 917 aa11.98□□□□□ -0.49
VRK3-219ENST00000600137 PLPPR2Q96GM1 343 aa11.98□□□□□ -0.49
VRK3-219ENST00000600137 OSBPL10Q9BXB5 764 aa11.98□□□□□ -0.49
VRK3-219ENST00000600137 NDEL1Q9GZM8 345 aa11.98□□□□□ -0.49
VRK3-219ENST00000600137 NUAK2Q9H093 628 aa11.98□□□□□ -0.49
VRK3-219ENST00000600137 PLEKHF2Q9H8W4 249 aa11.98□□□□□ -0.49
VRK3-219ENST00000600137 B9D1Q9UPM9 204 aa11.98□□□□□ -0.49
VRK3-219ENST00000600137 CSMD2Q7Z408 3487 aa11.98□□□□□ -0.49
VRK3-219ENST00000600137 IGLV1-36A0A0B4J1U3 117 aa11.97□□□□□ -0.49
VRK3-219ENST00000600137 ERICH4A6NGS2 130 aa11.97□□□□□ -0.49
VRK3-219ENST00000600137 SAC3D1A6NKF1 404 aa11.97□□□□□ -0.49
VRK3-219ENST00000600137 E9PQ18 207 aa11.97□□□□□ -0.49
VRK3-219ENST00000600137 XKRYO14609 159 aa11.97□□□□□ -0.49
VRK3-219ENST00000600137 IGKV3-15P01624 115 aa11.97□□□□□ -0.49
VRK3-219ENST00000600137 HLA-HP01893 362 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms