RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 LGI1O95970 557 aa10.9□□□□□ -0.67
SCN8A-208ENST00000599343 IGHV3-9P01782 118 aa10.9□□□□□ -0.67
SCN8A-208ENST00000599343 RPS19P39019 145 aaKnown RBP10.9□□□□□ -0.67
SCN8A-208ENST00000599343 CREB3L2Q70SY1 520 aa10.9□□□□□ -0.67
SCN8A-208ENST00000599343 RHOUQ7L0Q8 258 aa10.9□□□□□ -0.67
SCN8A-208ENST00000599343 ST8SIA2Q92186 375 aa10.9□□□□□ -0.67
SCN8A-208ENST00000599343 DCBLD2Q96PD2 775 aa10.9□□□□□ -0.67
SCN8A-208ENST00000599343 CDCA3Q99618 268 aaPredicted RBP10.9□□□□□ -0.67
SCN8A-208ENST00000599343 PRSS16Q9NQE7 514 aa10.9□□□□□ -0.67
SCN8A-208ENST00000599343 TAPBPO15533 448 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 CTRB1P17538 263 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 ACKR3P25106 362 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 RACK1P63244 317 aaKnown RBP10.89□□□□□ -0.67
SCN8A-208ENST00000599343 DCAF12Q5T6F0 453 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 CTRB2Q6GPI1 263 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 ADAM5Q6NVV9 412 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 TMEM104Q8NE00 496 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 OR1J2Q8NGS2 313 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 LURAP1Q96LR2 239 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 FAM173AQ9BQD7 235 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 CHST11Q9NPF2 352 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 COA3Q9Y2R0 106 aaPredicted RBP10.89□□□□□ -0.67
SCN8A-208ENST00000599343 PRELID3BQ9Y3B1 194 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 OR2A25A4D2G3 310 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 ZNF587BE7ETH6 402 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 CSNK1EP49674 416 aaKnown RBP10.89□□□□□ -0.67
SCN8A-208ENST00000599343 DCDP81605 110 aaKnown RBP10.89□□□□□ -0.67
SCN8A-208ENST00000599343 C17orf67Q0P5P2 114 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 RBM45Q8IUH3 476 aaKnown RBP10.89□□□□□ -0.67
SCN8A-208ENST00000599343 OR5AS1Q8N127 324 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 OR10Z1Q8NGY1 313 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 ZIC5Q96T25 663 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 DNMT3BQ9UBC3 853 aaKnown RBP10.89□□□□□ -0.67
SCN8A-208ENST00000599343 XRN1Q8IZH2 1706 aaKnown RBP10.89□□□□□ -0.67
SCN8A-208ENST00000599343 TRDV1A0A1B0GX56 115 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 FUCA1P04066 466 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 CD63P08962 238 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 GJA4P35212 333 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 FAM78AQ5JUQ0 283 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 NUDT8Q8WV74 236 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 NKX6-2Q9C056 277 aaPredicted RBP10.89□□□□□ -0.67
SCN8A-208ENST00000599343 CSNK1G1Q9HCP0 422 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 TM7SF3Q9NS93 570 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 MED9Q9NWA0 146 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 USP3Q9Y6I4 520 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 LTBP3Q9NS15 1303 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 DLG5Q8TDM6 1919 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 KNDC1Q76NI1 1749 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 NKX6-3A6NJ46 265 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 BCL6P41182 706 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 MAP2K6P52564 334 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 ERVFC1P60507 584 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 GPR85P60893 370 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 LRRC26Q2I0M4 334 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 MISPQ8IVT2 679 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 LILRA3Q8N6C8 439 aaPredicted RBP10.89□□□□□ -0.67
SCN8A-208ENST00000599343 NEURL3Q96EH8 262 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 ZC3HAV1LQ96H79 300 aaKnown RBP10.89□□□□□ -0.67
SCN8A-208ENST00000599343 DDOQ99489 341 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 ISYNA1Q9NPH2 558 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 GPR173Q9NS66 373 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 MUTYHQ9UIF7 546 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 CITO14578 2027 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 SLC5A10A0PJK1 596 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 FPR3P25089 353 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 GNB1P62873 340 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 DUSP6Q16828 381 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 H3F3CQ6NXT2 135 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 RABEPKQ7Z6M1 372 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 C1orf87Q8N0U7 546 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 LGI3Q8N145 548 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 SHARPINQ9H0F6 387 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 CSAG2Q9Y5P2 127 aa10.89□□□□□ -0.67
SCN8A-208ENST00000599343 MBLAC1A4D2B0 266 aaPredicted RBP10.88□□□□□ -0.67
SCN8A-208ENST00000599343 DEGS1O15121 323 aa10.88□□□□□ -0.67
SCN8A-208ENST00000599343 SPINT2O43291 252 aa10.88□□□□□ -0.67
SCN8A-208ENST00000599343 HOXC13P31276 330 aa10.88□□□□□ -0.67
SCN8A-208ENST00000599343 CCR9P51686 369 aa10.88□□□□□ -0.67
SCN8A-208ENST00000599343 UBTD2Q8WUN7 234 aa10.88□□□□□ -0.67
SCN8A-208ENST00000599343 TEX37Q96LM6 180 aa10.88□□□□□ -0.67
SCN8A-208ENST00000599343 PIGQQ9BRB3 760 aa10.88□□□□□ -0.67
SCN8A-208ENST00000599343 TWSG1Q9GZX9 223 aa10.88□□□□□ -0.67
SCN8A-208ENST00000599343 NIT2Q9NQR4 276 aa10.88□□□□□ -0.67
SCN8A-208ENST00000599343 ACOXLQ9NUZ1 547 aa10.88□□□□□ -0.67
SCN8A-208ENST00000599343 TAS2R4Q9NYW5 299 aa10.88□□□□□ -0.67
SCN8A-208ENST00000599343 CCL26Q9Y258 94 aa10.88□□□□□ -0.67
SCN8A-208ENST00000599343 NTNG1Q9Y2I2 539 aa10.88□□□□□ -0.67
SCN8A-208ENST00000599343 ZNF724A8MTY0 619 aa10.88□□□□□ -0.67
SCN8A-208ENST00000599343 SLC16A6O15403 523 aa10.88□□□□□ -0.67
SCN8A-208ENST00000599343 GLCEO94923 617 aa10.88□□□□□ -0.67
SCN8A-208ENST00000599343 CNIH1O95406 144 aa10.88□□□□□ -0.67
SCN8A-208ENST00000599343 CCSMST1Q4G0I0 132 aa10.88□□□□□ -0.67
SCN8A-208ENST00000599343 OR6M1Q8NGM8 313 aa10.88□□□□□ -0.67
SCN8A-208ENST00000599343 NAT6Q93015 286 aa10.88□□□□□ -0.67
SCN8A-208ENST00000599343 NRSN2Q9GZP1 204 aa10.88□□□□□ -0.67
SCN8A-208ENST00000599343 TMEM231Q9H6L2 316 aa10.88□□□□□ -0.67
SCN8A-208ENST00000599343 NGBQ9NPG2 151 aa10.88□□□□□ -0.67
SCN8A-208ENST00000599343 AKR7A3O95154 331 aa10.88□□□□□ -0.67
SCN8A-208ENST00000599343 GLI4P10075 376 aa10.88□□□□□ -0.67
SCN8A-208ENST00000599343 ZNF26P17031 533 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms