RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 OR5B2Q96R09 309 aa12.13□□□□□ -0.47
SHKBP1-218ENST00000598907 DHRS9Q9BPW9 319 aa12.13□□□□□ -0.47
SHKBP1-218ENST00000598907 RBM4BQ9BQ04 359 aaKnown RBP12.13□□□□□ -0.47
SHKBP1-218ENST00000598907 RBM4Q9BWF3 364 aaKnown RBP12.13□□□□□ -0.47
SHKBP1-218ENST00000598907 HDHD5Q9BXW7 423 aa12.13□□□□□ -0.47
SHKBP1-218ENST00000598907 ZNF696Q9H7X3 374 aa12.13□□□□□ -0.47
SHKBP1-218ENST00000598907 FKRPQ9H9S5 495 aa12.13□□□□□ -0.47
SHKBP1-218ENST00000598907 KRCC1Q9NPI7 259 aaPredicted RBP12.13□□□□□ -0.47
SHKBP1-218ENST00000598907 C8orf4Q9NR00 106 aa12.13□□□□□ -0.47
SHKBP1-218ENST00000598907 NPAP1Q9NZP6 1156 aa12.13□□□□□ -0.47
SHKBP1-218ENST00000598907 REV1Q9UBZ9 1251 aa12.13□□□□□ -0.47
SHKBP1-218ENST00000598907 ZNF229Q9UJW7 825 aa12.13□□□□□ -0.47
SHKBP1-218ENST00000598907 MCTS1Q9ULC4 181 aaKnown RBP12.13□□□□□ -0.47
SHKBP1-218ENST00000598907 EI24O14681 340 aa12.12□□□□□ -0.47
SHKBP1-218ENST00000598907 TNFSF11O14788 317 aa12.12□□□□□ -0.47
SHKBP1-218ENST00000598907 CXCL13O43927 109 aa12.12□□□□□ -0.47
SHKBP1-218ENST00000598907 GSTM3P21266 225 aa12.12□□□□□ -0.47
SHKBP1-218ENST00000598907 GPR4P46093 362 aa12.12□□□□□ -0.47
SHKBP1-218ENST00000598907 PTDSS1P48651 473 aaKnown RBP12.12□□□□□ -0.47
SHKBP1-218ENST00000598907 SLC9A3P48764 834 aa12.12□□□□□ -0.47
SHKBP1-218ENST00000598907 DIO1P49895 249 aa12.12□□□□□ -0.47
SHKBP1-218ENST00000598907 FABP6P51161 128 aa12.12□□□□□ -0.47
SHKBP1-218ENST00000598907 RAC3P60763 192 aa12.12□□□□□ -0.47
SHKBP1-218ENST00000598907 H3F3AP84243 136 aa12.12□□□□□ -0.47
SHKBP1-218ENST00000598907 MFSD13AQ14CX5 517 aa12.12□□□□□ -0.47
SHKBP1-218ENST00000598907 PPA1Q15181 289 aa12.12□□□□□ -0.47
SHKBP1-218ENST00000598907 TFAP2EQ6VUC0 442 aa12.12□□□□□ -0.47
SHKBP1-218ENST00000598907 B3GLCTQ6Y288 498 aa12.12□□□□□ -0.47
SHKBP1-218ENST00000598907 BHLHA15Q7RTS1 189 aaPredicted RBP12.12□□□□□ -0.47
SHKBP1-218ENST00000598907 LRRC17Q8N6Y2 441 aa12.12□□□□□ -0.47
SHKBP1-218ENST00000598907 OR10D3Q8NH80 312 aa12.12□□□□□ -0.47
SHKBP1-218ENST00000598907 OR2V1Q8NHB1 315 aa12.12□□□□□ -0.47
SHKBP1-218ENST00000598907 NANSQ9NR45 359 aa12.12□□□□□ -0.47
SHKBP1-218ENST00000598907 SIGLEC7Q9Y286 467 aa12.12□□□□□ -0.47
SHKBP1-218ENST00000598907 A0A0A6YYJ9 748 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 UNC119BA6NIH7 251 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 EFCAB9A8MZ26 197 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 SULT2B1O00204 365 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 DLGAP1O14490 977 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 LYZL6O75951 148 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 GRPRP30550 384 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 P2RY4P51582 365 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 CARD18P57730 90 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 FXYD6P3P58550 94 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 CSNK2A1P68400 391 aaPredicted RBP12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 SLC35A1P78382 337 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 LGALS3BPQ08380 585 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 OR7A5Q15622 319 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 LRRC36Q1X8D7 754 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 ANKDD1AQ495B1 522 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 PDSS1Q5T2R2 415 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 HBMQ6B0K9 141 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 KLHL17Q6TDP4 642 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 RASSF6Q6ZTQ3 369 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 NUFIP2Q7Z417 695 aaKnown RBP12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 PEG10Q86TG7 708 aaKnown RBP12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 PARP8Q8N3A8 854 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 CLDN22Q8N7P3 220 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 SCAIQ8N9R8 606 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 ATG16L2Q8NAA4 619 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 ADPRHL1Q8NDY3 354 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 MAGEE2Q8TD90 523 aaPredicted RBP12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 OSTF1Q92882 214 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 DNAJA3Q96EY1 480 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 FOXN4Q96NZ1 517 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 TAPBPLQ9BX59 468 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 SRXN1Q9BYN0 137 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 MRPL39Q9NYK5 338 aaKnown RBP12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 POFUT2Q9Y2G5 429 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 HIF3AQ9Y2N7 669 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 CORINQ9Y5Q5 1042 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 FKBP7Q9Y680 259 aa12.11□□□□□ -0.47
SHKBP1-218ENST00000598907 VWFP04275 2813 aa12.1□□□□□ -0.47
SHKBP1-218ENST00000598907 E9PQ18 207 aa12.1□□□□□ -0.47
SHKBP1-218ENST00000598907 MS4A18H0YCH9 400 aa12.1□□□□□ -0.47
SHKBP1-218ENST00000598907 H0YJX3 145 aa12.1□□□□□ -0.47
SHKBP1-218ENST00000598907 MITFO75030 526 aaPredicted RBP12.1□□□□□ -0.47
SHKBP1-218ENST00000598907 SAGP10523 405 aaPredicted RBP12.1□□□□□ -0.47
SHKBP1-218ENST00000598907 IL2RGP31785 369 aa12.1□□□□□ -0.47
SHKBP1-218ENST00000598907 OR2B6P58173 313 aa12.1□□□□□ -0.47
SHKBP1-218ENST00000598907 ZP4Q12836 540 aa12.1□□□□□ -0.47
SHKBP1-218ENST00000598907 SNCBQ16143 134 aa12.1□□□□□ -0.47
SHKBP1-218ENST00000598907 MS4A18Q3C1V0 323 aa12.1□□□□□ -0.47
SHKBP1-218ENST00000598907 ZBED5Q49AG3 693 aa12.1□□□□□ -0.47
SHKBP1-218ENST00000598907 TMEM201Q5SNT2 666 aa12.1□□□□□ -0.47
SHKBP1-218ENST00000598907 PAQR6Q6TCH4 344 aa12.1□□□□□ -0.47
SHKBP1-218ENST00000598907 THSD4Q6ZMP0 1018 aa12.1□□□□□ -0.47
SHKBP1-218ENST00000598907 H1FNTQ75WM6 255 aaPredicted RBP12.1□□□□□ -0.47
SHKBP1-218ENST00000598907 OAFQ86UD1 273 aa12.1□□□□□ -0.47
SHKBP1-218ENST00000598907 LRRC75AQ8NAA5 344 aa12.1□□□□□ -0.47
SHKBP1-218ENST00000598907 OR13C2Q8NGS9 318 aa12.1□□□□□ -0.47
SHKBP1-218ENST00000598907 OR5J2Q8NH18 312 aa12.1□□□□□ -0.47
SHKBP1-218ENST00000598907 ZNF418Q8TF45 676 aaPredicted RBP12.1□□□□□ -0.47
SHKBP1-218ENST00000598907 FAM216AQ8WUB2 273 aa12.1□□□□□ -0.47
SHKBP1-218ENST00000598907 SLC25A36Q96CQ1 311 aa12.1□□□□□ -0.47
SHKBP1-218ENST00000598907 BPESC1Q9GZL8 116 aa12.1□□□□□ -0.47
SHKBP1-218ENST00000598907 ZNF556Q9HAH1 456 aa12.1□□□□□ -0.47
SHKBP1-218ENST00000598907 PAPOLBQ9NRJ5 636 aaKnown RBP12.1□□□□□ -0.47
SHKBP1-218ENST00000598907 GLRX2Q9NS18 164 aa12.1□□□□□ -0.47
SHKBP1-218ENST00000598907 KRT84Q9NSB2 600 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms