RNA–Protein interactions for RNA: ENST00000597396.5

SHKBP1-214, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-214ENST00000597396 HRNRQ86YZ3 2850 aaPredicted RBP17.17■□□□□ 0.34
SHKBP1-214ENST00000597396 A0A1W2PPR1 153 aa17.17■□□□□ 0.34
SHKBP1-214ENST00000597396 FARS2O95363 451 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-214ENST00000597396 OR8G3PP0DMU2 310 aa17.17■□□□□ 0.34
SHKBP1-214ENST00000597396 APEHP13798 732 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-214ENST00000597396 PTAFRP25105 342 aa17.17■□□□□ 0.34
SHKBP1-214ENST00000597396 NOS3P29474 1203 aa17.17■□□□□ 0.34
SHKBP1-214ENST00000597396 FBN2P35556 2912 aa17.17■□□□□ 0.34
SHKBP1-214ENST00000597396 ACTR3P61158 418 aa17.17■□□□□ 0.34
SHKBP1-214ENST00000597396 ATP6AP1Q15904 470 aa17.17■□□□□ 0.34
SHKBP1-214ENST00000597396 CLEC12AQ5QGZ9 265 aa17.17■□□□□ 0.34
SHKBP1-214ENST00000597396 SLC25A47Q6Q0C1 308 aa17.17■□□□□ 0.34
SHKBP1-214ENST00000597396 ZNF704Q6ZNC4 412 aaPredicted RBP17.17■□□□□ 0.34
SHKBP1-214ENST00000597396 ADCK1Q86TW2 530 aa17.17■□□□□ 0.34
SHKBP1-214ENST00000597396 NMD3Q96D46 503 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-214ENST00000597396 NIPSNAP1Q9BPW8 284 aa17.17■□□□□ 0.34
SHKBP1-214ENST00000597396 ZNF556Q9HAH1 456 aa17.17■□□□□ 0.34
SHKBP1-214ENST00000597396 MOV10Q9HCE1 1003 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-214ENST00000597396 RAI1Q7Z5J4 1906 aaPredicted RBP17.17■□□□□ 0.34
SHKBP1-214ENST00000597396 ANKRD17O75179 2603 aaKnown RBP17.17■□□□□ 0.34
SHKBP1-214ENST00000597396 IGKV1D-43A0A0B4J1Z2 117 aa17.16■□□□□ 0.34
SHKBP1-214ENST00000597396 SLC22A23A1A5C7 686 aa17.16■□□□□ 0.34
SHKBP1-214ENST00000597396 PRSS37A4D1T9 235 aa17.16■□□□□ 0.34
SHKBP1-214ENST00000597396 IMPA2O14732 288 aa17.16■□□□□ 0.34
SHKBP1-214ENST00000597396 AHCYL1O43865 530 aa17.16■□□□□ 0.34
SHKBP1-214ENST00000597396 SOX14O95416 240 aa17.16■□□□□ 0.34
SHKBP1-214ENST00000597396 TXNDC12O95881 172 aa17.16■□□□□ 0.34
SHKBP1-214ENST00000597396 PLAUP00749 431 aa17.16■□□□□ 0.34
SHKBP1-214ENST00000597396 CD79AP11912 226 aa17.16■□□□□ 0.34
SHKBP1-214ENST00000597396 COX10Q12887 443 aa17.16■□□□□ 0.34
SHKBP1-214ENST00000597396 SHQ1Q6PI26 577 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-214ENST00000597396 JAZF1Q86VZ6 243 aa17.16■□□□□ 0.34
SHKBP1-214ENST00000597396 HS3ST5Q8IZT8 346 aa17.16■□□□□ 0.34
SHKBP1-214ENST00000597396 PIAS4Q8N2W9 510 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-214ENST00000597396 SLC22A24Q8N4F4 322 aa17.16■□□□□ 0.34
SHKBP1-214ENST00000597396 PYDC1Q8WXC3 89 aa17.16■□□□□ 0.34
SHKBP1-214ENST00000597396 NRGNQ92686 78 aa17.16■□□□□ 0.34
SHKBP1-214ENST00000597396 NRBF2Q96F24 287 aa17.16■□□□□ 0.34
SHKBP1-214ENST00000597396 BDH2Q9BUT1 245 aa17.16■□□□□ 0.34
SHKBP1-214ENST00000597396 DENND2DQ9H6A0 471 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-214ENST00000597396 UBTD1Q9HAC8 227 aa17.16■□□□□ 0.34
SHKBP1-214ENST00000597396 NTN4Q9HB63 628 aa17.16■□□□□ 0.34
SHKBP1-214ENST00000597396 IL20Q9NYY1 176 aa17.16■□□□□ 0.34
SHKBP1-214ENST00000597396 SPG11Q96JI7 2443 aa17.16■□□□□ 0.34
SHKBP1-214ENST00000597396 ABCD4O14678 606 aa17.15■□□□□ 0.34
SHKBP1-214ENST00000597396 ARPC3O15145 178 aa17.15■□□□□ 0.34
SHKBP1-214ENST00000597396 IDH3BO43837 385 aa17.15■□□□□ 0.34
SHKBP1-214ENST00000597396 HLA-HP01893 362 aa17.15■□□□□ 0.34
SHKBP1-214ENST00000597396 ANXA8P13928 327 aa17.15■□□□□ 0.34
SHKBP1-214ENST00000597396 CD40P25942 277 aa17.15■□□□□ 0.34
SHKBP1-214ENST00000597396 GUCA1AP43080 201 aaPredicted RBP17.15■□□□□ 0.34
SHKBP1-214ENST00000597396 ADAM5Q6NVV9 412 aa17.15■□□□□ 0.34
SHKBP1-214ENST00000597396 CD300LDQ6UXZ3 194 aa17.15■□□□□ 0.34
SHKBP1-214ENST00000597396 MDP1Q86V88 176 aa17.15■□□□□ 0.34
SHKBP1-214ENST00000597396 SKA3Q8IX90 412 aa17.15■□□□□ 0.34
SHKBP1-214ENST00000597396 C10orf67Q8IYJ2 551 aa17.15■□□□□ 0.34
SHKBP1-214ENST00000597396 ATG16L2Q8NAA4 619 aa17.15■□□□□ 0.34
SHKBP1-214ENST00000597396 OR5K1Q8NHB7 308 aa17.15■□□□□ 0.34
SHKBP1-214ENST00000597396 HTRA1Q92743 480 aa17.15■□□□□ 0.34
SHKBP1-214ENST00000597396 SLC38A2Q96QD8 506 aa17.15■□□□□ 0.34
SHKBP1-214ENST00000597396 KCNS3Q9BQ31 491 aa17.15■□□□□ 0.34
SHKBP1-214ENST00000597396 TMEM204Q9BSN7 226 aa17.15■□□□□ 0.34
SHKBP1-214ENST00000597396 TSSK6Q9BXA6 273 aa17.15■□□□□ 0.34
SHKBP1-214ENST00000597396 PLA2G12AQ9BZM1 189 aa17.15■□□□□ 0.34
SHKBP1-214ENST00000597396 PLEKHF2Q9H8W4 249 aa17.15■□□□□ 0.34
SHKBP1-214ENST00000597396 SEC61A2Q9H9S3 476 aa17.15■□□□□ 0.34
SHKBP1-214ENST00000597396 KIF17Q9P2E2 1029 aa17.15■□□□□ 0.34
SHKBP1-214ENST00000597396 ITGB1BP2Q9UKP3 347 aa17.15■□□□□ 0.34
SHKBP1-214ENST00000597396 EDARQ9UNE0 448 aa17.15■□□□□ 0.34
SHKBP1-214ENST00000597396 OTOGQ6ZRI0 2925 aa17.15■□□□□ 0.34
SHKBP1-214ENST00000597396 A0A1W2PPL8 197 aa17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 UBL3O95164 117 aa17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 RENP00797 406 aa17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 CBR1P16152 277 aa17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 NPR2P20594 1047 aa17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 PRKACGP22612 351 aa17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 CDAP32320 146 aa17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 IDH3GP51553 393 aaPredicted RBP17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 MRPS34P82930 218 aaKnown RBP17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 PIGFQ07326 219 aa17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 NPRL3Q12980 569 aa17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 SGCAQ16586 387 aa17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 GSG1Q2KHT4 349 aa17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 NRN1LQ496H8 165 aa17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 LEG1Q6P5S2 330 aa17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 PTCHD4Q6ZW05 846 aa17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 AMIGO2Q86SJ2 522 aa17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 CDH24Q86UP0 819 aa17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 DEPDC4Q8N2C3 294 aa17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 KBTBD8Q8NFY9 601 aa17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 OR8D4Q8NGM9 314 aa17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 OR4K13Q8NH42 304 aa17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 TEX47Q8TBZ9 253 aa17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 LRTOMTQ8WZ04 291 aa17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 SH3GL3Q99963 347 aa17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 SYT4Q9H2B2 425 aa17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 KCNN2Q9H2S1 579 aa17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 RERGLQ9H628 205 aa17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 VSX1Q9NZR4 365 aaPredicted RBP17.14■□□□□ 0.33
SHKBP1-214ENST00000597396 UGT2A1Q9Y4X1 527 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms