RNA–Protein interactions for RNA: ENST00000597215.5

VRK3-213, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-213ENST00000597215 CRISP1P54107 249 aa12.59□□□□□ -0.39
VRK3-213ENST00000597215 UBE2NP61088 152 aaKnown RBP12.59□□□□□ -0.39
VRK3-213ENST00000597215 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.59□□□□□ -0.39
VRK3-213ENST00000597215 DAG1Q14118 895 aa12.59□□□□□ -0.39
VRK3-213ENST00000597215 PPA1Q15181 289 aa12.59□□□□□ -0.39
VRK3-213ENST00000597215 TAB1Q15750 504 aa12.59□□□□□ -0.39
VRK3-213ENST00000597215 TBRG1Q3YBR2 411 aa12.59□□□□□ -0.39
VRK3-213ENST00000597215 HIKESHIQ53FT3 197 aa12.59□□□□□ -0.39
VRK3-213ENST00000597215 LEG1Q6P5S2 330 aa12.59□□□□□ -0.39
VRK3-213ENST00000597215 ZNF813Q6ZN06 617 aa12.59□□□□□ -0.39
VRK3-213ENST00000597215 ZNF627Q7L945 461 aa12.59□□□□□ -0.39
VRK3-213ENST00000597215 IQCF1Q8N6M8 205 aa12.59□□□□□ -0.39
VRK3-213ENST00000597215 SDR9C7Q8NEX9 313 aa12.59□□□□□ -0.39
VRK3-213ENST00000597215 OR52E2Q8NGJ4 325 aa12.59□□□□□ -0.39
VRK3-213ENST00000597215 NSMAFQ92636 917 aa12.59□□□□□ -0.39
VRK3-213ENST00000597215 BCL2L2Q92843 193 aaPredicted RBP12.59□□□□□ -0.39
VRK3-213ENST00000597215 EME1Q96AY2 570 aa12.59□□□□□ -0.39
VRK3-213ENST00000597215 ZC3HAV1LQ96H79 300 aaKnown RBP12.59□□□□□ -0.39
VRK3-213ENST00000597215 TEX12Q9BXU0 123 aa12.59□□□□□ -0.39
VRK3-213ENST00000597215 SYT4Q9H2B2 425 aa12.59□□□□□ -0.39
VRK3-213ENST00000597215 DCLRE1BQ9H816 532 aa12.59□□□□□ -0.39
VRK3-213ENST00000597215 SLC25A19Q9HC21 320 aa12.59□□□□□ -0.39
VRK3-213ENST00000597215 OBP2BQ9NPH6 170 aa12.59□□□□□ -0.39
VRK3-213ENST00000597215 USE1Q9NZ43 259 aa12.59□□□□□ -0.39
VRK3-213ENST00000597215 TMEFF2Q9UIK5 374 aaPredicted RBP12.59□□□□□ -0.39
VRK3-213ENST00000597215 KLHL21Q9UJP4 597 aa12.59□□□□□ -0.39
VRK3-213ENST00000597215 AMDHD2Q9Y303 409 aa12.59□□□□□ -0.39
VRK3-213ENST00000597215 ORC6Q9Y5N6 252 aa12.59□□□□□ -0.39
VRK3-213ENST00000597215 UTP20O75691 2785 aaKnown RBP12.58□□□□□ -0.39
VRK3-213ENST00000597215 A0A096LPE4 126 aa12.58□□□□□ -0.4
VRK3-213ENST00000597215 IGKV1D-43A0A0B4J1Z2 117 aa12.58□□□□□ -0.4
VRK3-213ENST00000597215 A0A1W2PPZ6 126 aa12.58□□□□□ -0.4
VRK3-213ENST00000597215 RIIAD1A6NNX1 92 aa12.58□□□□□ -0.4
VRK3-213ENST00000597215 MITFO75030 526 aaPredicted RBP12.58□□□□□ -0.4
VRK3-213ENST00000597215 SEC14L2O76054 403 aa12.58□□□□□ -0.4
VRK3-213ENST00000597215 WNT11O96014 354 aa12.58□□□□□ -0.4
VRK3-213ENST00000597215 ALPLP05186 524 aa12.58□□□□□ -0.4
VRK3-213ENST00000597215 THBDP07204 575 aa12.58□□□□□ -0.4
VRK3-213ENST00000597215 B4GALT1P15291 398 aa12.58□□□□□ -0.4
VRK3-213ENST00000597215 CRABP1P29762 137 aa12.58□□□□□ -0.4
VRK3-213ENST00000597215 GUCA1AP43080 201 aaPredicted RBP12.58□□□□□ -0.4
VRK3-213ENST00000597215 GIPRP48546 466 aa12.58□□□□□ -0.4
VRK3-213ENST00000597215 ALDH3A2P51648 485 aa12.58□□□□□ -0.4
VRK3-213ENST00000597215 CDK5Q00535 292 aa12.58□□□□□ -0.4
VRK3-213ENST00000597215 GINS1Q14691 196 aa12.58□□□□□ -0.4
VRK3-213ENST00000597215 NRN1LQ496H8 165 aa12.58□□□□□ -0.4
VRK3-213ENST00000597215 DNM1P34Q6PK57 102 aa12.58□□□□□ -0.4
VRK3-213ENST00000597215 ZBTB49Q6ZSB9 765 aa12.58□□□□□ -0.4
VRK3-213ENST00000597215 WFDC8Q8IUA0 241 aa12.58□□□□□ -0.4
VRK3-213ENST00000597215 CCDC36Q8IYA8 594 aa12.58□□□□□ -0.4
VRK3-213ENST00000597215 CBR4Q8N4T8 237 aa12.58□□□□□ -0.4
VRK3-213ENST00000597215 NPEPL1Q8NDH3 523 aa12.58□□□□□ -0.4
VRK3-213ENST00000597215 OR52N5Q8NH56 324 aa12.58□□□□□ -0.4
VRK3-213ENST00000597215 NMNAT3Q96T66 252 aa12.58□□□□□ -0.4
VRK3-213ENST00000597215 NELFAQ9H3P2 528 aa12.58□□□□□ -0.4
VRK3-213ENST00000597215 CMC2Q9NRP2 79 aa12.58□□□□□ -0.4
VRK3-213ENST00000597215 TMEM38BQ9NVV0 291 aa12.58□□□□□ -0.4
VRK3-213ENST00000597215 SLC25A15Q9Y619 301 aa12.58□□□□□ -0.4
VRK3-213ENST00000597215 ARPC4-TTLL3A0A0A6YYG9 625 aa12.57□□□□□ -0.4
VRK3-213ENST00000597215 SLC16A7O60669 478 aa12.57□□□□□ -0.4
VRK3-213ENST00000597215 KHDRBS3O75525 346 aaKnown RBP12.57□□□□□ -0.4
VRK3-213ENST00000597215 GOSR1O95249 250 aa12.57□□□□□ -0.4
VRK3-213ENST00000597215 FARS2O95363 451 aaKnown RBP12.57□□□□□ -0.4
VRK3-213ENST00000597215 HMGN1P05114 100 aa12.57□□□□□ -0.4
VRK3-213ENST00000597215 OR8G3PP0DMU2 310 aa12.57□□□□□ -0.4
VRK3-213ENST00000597215 CTLA4P16410 223 aa12.57□□□□□ -0.4
VRK3-213ENST00000597215 ZNF3P17036 446 aa12.57□□□□□ -0.4
VRK3-213ENST00000597215 NPR2P20594 1047 aa12.57□□□□□ -0.4
VRK3-213ENST00000597215 CRYGSP22914 178 aa12.57□□□□□ -0.4
VRK3-213ENST00000597215 PAX7P23759 505 aa12.57□□□□□ -0.4
VRK3-213ENST00000597215 RAD23AP54725 363 aa12.57□□□□□ -0.4
VRK3-213ENST00000597215 MRPS34P82930 218 aaKnown RBP12.57□□□□□ -0.4
VRK3-213ENST00000597215 TRIP10Q15642 601 aa12.57□□□□□ -0.4
VRK3-213ENST00000597215 ALKBH2Q6NS38 261 aa12.57□□□□□ -0.4
VRK3-213ENST00000597215 ACSM5Q6NUN0 579 aa12.57□□□□□ -0.4
VRK3-213ENST00000597215 C22orf34Q6ZV56 151 aa12.57□□□□□ -0.4
VRK3-213ENST00000597215 WDR31Q8NA23 367 aa12.57□□□□□ -0.4
VRK3-213ENST00000597215 NANOS1Q8WY41 292 aaKnown RBP12.57□□□□□ -0.4
VRK3-213ENST00000597215 GABARAPL3Q9BY60 117 aa12.57□□□□□ -0.4
VRK3-213ENST00000597215 PRRG3Q9BZD7 231 aa12.57□□□□□ -0.4
VRK3-213ENST00000597215 NUAK2Q9H093 628 aa12.57□□□□□ -0.4
VRK3-213ENST00000597215 NGBQ9NPG2 151 aa12.57□□□□□ -0.4
VRK3-213ENST00000597215 RPRD1BQ9NQG5 326 aaKnown RBP12.57□□□□□ -0.4
VRK3-213ENST00000597215 UGT2A1Q9Y4X1 527 aa12.57□□□□□ -0.4
VRK3-213ENST00000597215 A0A1W2PPL8 197 aa12.56□□□□□ -0.4
VRK3-213ENST00000597215 A0A1W2PR80 420 aa12.56□□□□□ -0.4
VRK3-213ENST00000597215 OR6C68A6NDL8 312 aa12.56□□□□□ -0.4
VRK3-213ENST00000597215 MGRN1O60291 552 aa12.56□□□□□ -0.4
VRK3-213ENST00000597215 CDAP32320 146 aa12.56□□□□□ -0.4
VRK3-213ENST00000597215 CAPZA2P47755 286 aa12.56□□□□□ -0.4
VRK3-213ENST00000597215 CRMP1Q14194 572 aa12.56□□□□□ -0.4
VRK3-213ENST00000597215 DAZAP2Q15038 168 aaPredicted RBP12.56□□□□□ -0.4
VRK3-213ENST00000597215 PTGES3Q15185 160 aaKnown RBP12.56□□□□□ -0.4
VRK3-213ENST00000597215 ZNF362Q5T0B9 420 aaPredicted RBP12.56□□□□□ -0.4
VRK3-213ENST00000597215 HIST2H2BCQ6DN03 193 aa12.56□□□□□ -0.4
VRK3-213ENST00000597215 FOXL2NBQ6ZUU3 175 aa12.56□□□□□ -0.4
VRK3-213ENST00000597215 SLC22A24Q8N4F4 322 aa12.56□□□□□ -0.4
VRK3-213ENST00000597215 CYB561A3Q8NBI2 242 aa12.56□□□□□ -0.4
VRK3-213ENST00000597215 SLC37A3Q8NCC5 494 aa12.56□□□□□ -0.4
VRK3-213ENST00000597215 MARVELD3Q96A59 401 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms