RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 RRM2P31350 389 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 MAGEA2P43356 314 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 GIPRP48546 466 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 FABP6P51161 128 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 ERVK-25P63136 954 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 SPIBQ01892 262 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 TRIM25Q14258 630 aaKnown RBP9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 TAF11Q15544 211 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 MST1LQ2TV78 715 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 ZBED5Q49AG3 693 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 AGAP6Q5VW22 663 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 SLC25A47Q6Q0C1 308 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 THSD4Q6ZMP0 1018 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 RRM2BQ7LG56 351 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 HDDC2Q7Z4H3 204 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 ZER1Q7Z7L7 766 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 ZNF584Q8IVC4 421 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 ZDHHC21Q8IVQ6 265 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 CDK20Q8IZL9 346 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 DEPDC4Q8N2C3 294 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 CIARTQ8N365 385 aaPredicted RBP9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 ARIH2OSQ8N7S6 290 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 NABP1Q96AH0 204 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 SLC7A6OSQ96CW6 309 aaPredicted RBP9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 RSRC1Q96IZ7 334 aaKnown RBP9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 MUC13Q9H3R2 512 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 SMURF2Q9HAU4 748 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 CA10Q9NS85 328 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 CBLN4Q9NTU7 201 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 GDF2Q9UK05 429 aaPredicted RBP9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 PRPF19Q9UMS4 504 aaKnown RBP9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 FN1P02751 2386 aaKnown RBP9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 ABCA2Q9BZC7 2435 aa9.52□□□□□ -0.89
SHKBP1-206ENST00000595523 TRIM64A6NGJ6 449 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 TRIM64BA6NI03 449 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 H7C1C5 153 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 ACOT8O14734 319 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 UBL3O95164 117 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 GADD45GO95257 159 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 CD14P08571 375 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 MMP7P09237 267 aaPredicted RBP9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 OR8G3PP0DMU2 310 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 ZNF35P13682 527 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 APOBEC3AP31941 199 aaPredicted RBP9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 CDAP32320 146 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 ACVR1BP36896 505 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 PTDSS1P48651 473 aaKnown RBP9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 LCN6P62502 163 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 RAB1AP62820 205 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 CD47Q08722 323 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 ADIPOQQ15848 244 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 MSMPQ1L6U9 139 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 SWI5Q1ZZU3 235 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 NRN1LQ496H8 165 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 MESTQ5EB52 335 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 MTX3Q5HYI7 312 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 DHFR2Q86XF0 187 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 FBXL14Q8N1E6 418 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 NUP37Q8NFH4 326 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 NANOS1Q8WY41 292 aaKnown RBP9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 MCUR1Q96AQ8 359 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 CCDC124Q96CT7 223 aaKnown RBP9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 ASB9Q96DX5 294 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 Q96M85 177 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 GPX7Q96SL4 187 aaPredicted RBP9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 ALG12Q9BV10 488 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 CACNG6Q9BXT2 260 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 NRIP3Q9NQ35 241 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 VNN3Q9NY84 501 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 STX18Q9P2W9 335 aaKnown RBP9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 IL20RAQ9UHF4 553 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 LYVE1Q9Y5Y7 322 aa9.51□□□□□ -0.89
SHKBP1-206ENST00000595523 UNC119BA6NIH7 251 aa9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 IMPA2O14732 288 aa9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 MGRN1O60291 552 aa9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 NDUFB2O95178 105 aa9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 RPL4P36578 427 aaKnown RBP9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 GSSP48637 474 aa9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 ZNF84P51523 738 aa9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 HMGA2P52926 109 aa9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 SMIM11AP58511 58 aa9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 MRPS34P82930 218 aaKnown RBP9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 RAB39AQ14964 217 aa9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 FAM205BPQ63HN1 556 aa9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 PGM2L1Q6PCE3 622 aa9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 DNM1P46Q6ZS02 220 aa9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 FOXL2NBQ6ZUU3 175 aa9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 LRRC18Q8N456 261 aa9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 PAQR4Q8N4S7 273 aaPredicted RBP9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 OR4F15Q8NGB8 312 aa9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 OR4C15Q8NGM1 316 aa9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 NSMAFQ92636 917 aa9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 RASD2Q96D21 266 aa9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 TRMT61AQ96FX7 289 aaKnown RBP9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 COX4I2Q96KJ9 171 aa9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 SMR3AQ99954 134 aa9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 KCNS3Q9BQ31 491 aa9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 THTPAQ9BU02 230 aa9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 DENND2DQ9H6A0 471 aaPredicted RBP9.5□□□□□ -0.89
SHKBP1-206ENST00000595523 MAGIXQ9H6Y5 334 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms