RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 C20orf204Q6ZNR8 217 aa22.48■■□□□ 1.19
TRIM28-204ENST00000594806 C10orf67Q8IYJ2 551 aa22.48■■□□□ 1.19
TRIM28-204ENST00000594806 SLC38A2Q96QD8 506 aa22.48■■□□□ 1.19
TRIM28-204ENST00000594806 C1QTNF6Q9BXI9 259 aa22.48■■□□□ 1.19
TRIM28-204ENST00000594806 ST6GALNAC2Q9UJ37 374 aa22.48■■□□□ 1.19
TRIM28-204ENST00000594806 FBXL3Q9UKT7 428 aa22.48■■□□□ 1.19
TRIM28-204ENST00000594806 AP4S1Q9Y587 144 aa22.48■■□□□ 1.19
TRIM28-204ENST00000594806 TEX13CA0A0J9YWL9 993 aa22.47■■□□□ 1.19
TRIM28-204ENST00000594806 PRSS37A4D1T9 235 aa22.47■■□□□ 1.19
TRIM28-204ENST00000594806 ABCD4O14678 606 aa22.47■■□□□ 1.19
TRIM28-204ENST00000594806 SEC14L2O76054 403 aa22.47■■□□□ 1.19
TRIM28-204ENST00000594806 UBL3O95164 117 aa22.47■■□□□ 1.19
TRIM28-204ENST00000594806 IGLV1-44P01699 117 aa22.47■■□□□ 1.19
TRIM28-204ENST00000594806 FCGR1AP12314 374 aa22.47■■□□□ 1.19
TRIM28-204ENST00000594806 CAPZA2P47755 286 aa22.47■■□□□ 1.19
TRIM28-204ENST00000594806 ERFP50548 548 aa22.47■■□□□ 1.19
TRIM28-204ENST00000594806 MESTQ5EB52 335 aa22.47■■□□□ 1.19
TRIM28-204ENST00000594806 PAMR1Q6UXH9 720 aa22.47■■□□□ 1.19
TRIM28-204ENST00000594806 SAMD8Q96LT4 415 aa22.47■■□□□ 1.19
TRIM28-204ENST00000594806 ERMAPQ96PL5 475 aaPredicted RBP22.47■■□□□ 1.19
TRIM28-204ENST00000594806 SNX18Q96RF0 628 aa22.47■■□□□ 1.19
TRIM28-204ENST00000594806 IFT27Q9BW83 186 aa22.47■■□□□ 1.19
TRIM28-204ENST00000594806 B3GNT2Q9NY97 397 aa22.47■■□□□ 1.19
TRIM28-204ENST00000594806 IL20RAQ9UHF4 553 aa22.47■■□□□ 1.19
TRIM28-204ENST00000594806 ANKRD17O75179 2603 aaKnown RBP22.47■■□□□ 1.19
TRIM28-204ENST00000594806 SLC22A23A1A5C7 686 aa22.46■■□□□ 1.19
TRIM28-204ENST00000594806 HS3ST1O14792 307 aa22.46■■□□□ 1.19
TRIM28-204ENST00000594806 GSG1Q2KHT4 349 aa22.46■■□□□ 1.19
TRIM28-204ENST00000594806 IL17RDQ8NFM7 739 aa22.46■■□□□ 1.19
TRIM28-204ENST00000594806 RAB3IPQ96QF0 476 aaPredicted RBP22.46■■□□□ 1.19
TRIM28-204ENST00000594806 FEVQ99581 238 aa22.46■■□□□ 1.19
TRIM28-204ENST00000594806 SIAEQ9HAT2 523 aa22.46■■□□□ 1.19
TRIM28-204ENST00000594806 VSX1Q9NZR4 365 aaPredicted RBP22.46■■□□□ 1.19
TRIM28-204ENST00000594806 PDP1Q9P0J1 537 aaPredicted RBP22.46■■□□□ 1.19
TRIM28-204ENST00000594806 RAI1Q7Z5J4 1906 aaPredicted RBP22.46■■□□□ 1.19
TRIM28-204ENST00000594806 TIPRLO75663 272 aa22.45■■□□□ 1.18
TRIM28-204ENST00000594806 SLC2A10O95528 541 aa22.45■■□□□ 1.18
TRIM28-204ENST00000594806 PPP1R3DO95685 299 aa22.45■■□□□ 1.18
TRIM28-204ENST00000594806 PLAUP00749 431 aa22.45■■□□□ 1.18
TRIM28-204ENST00000594806 RAF1P04049 648 aa22.45■■□□□ 1.18
TRIM28-204ENST00000594806 ANXA8P13928 327 aa22.45■■□□□ 1.18
TRIM28-204ENST00000594806 FASP25445 335 aa22.45■■□□□ 1.18
TRIM28-204ENST00000594806 NOS3P29474 1203 aa22.45■■□□□ 1.18
TRIM28-204ENST00000594806 IST1P53990 364 aa22.45■■□□□ 1.18
TRIM28-204ENST00000594806 ACTR3P61158 418 aa22.45■■□□□ 1.18
TRIM28-204ENST00000594806 FMODQ06828 376 aa22.45■■□□□ 1.18
TRIM28-204ENST00000594806 SLC36A2Q495M3 483 aa22.45■■□□□ 1.18
TRIM28-204ENST00000594806 SKA3Q8IX90 412 aa22.45■■□□□ 1.18
TRIM28-204ENST00000594806 ZNF611Q8N823 705 aa22.45■■□□□ 1.18
TRIM28-204ENST00000594806 AKAP1Q92667 903 aaKnown RBP eCLIP22.45■■□□□ 1.18
TRIM28-204ENST00000594806 GTPBP3Q969Y2 492 aaKnown RBP22.45■■□□□ 1.18
TRIM28-204ENST00000594806 RASD2Q96D21 266 aa22.45■■□□□ 1.18
TRIM28-204ENST00000594806 KCNS3Q9BQ31 491 aa22.45■■□□□ 1.18
TRIM28-204ENST00000594806 BDH2Q9BUT1 245 aa22.45■■□□□ 1.18
TRIM28-204ENST00000594806 KCNN2Q9H2S1 579 aa22.45■■□□□ 1.18
TRIM28-204ENST00000594806 BAIAP2Q9UQB8 552 aa22.45■■□□□ 1.18
TRIM28-204ENST00000594806 DSCAMO60469 2012 aa22.45■■□□□ 1.18
TRIM28-204ENST00000594806 SOCS2O14508 198 aa22.44■■□□□ 1.18
TRIM28-204ENST00000594806 CD79AP11912 226 aa22.44■■□□□ 1.18
TRIM28-204ENST00000594806 DNASE1P24855 282 aa22.44■■□□□ 1.18
TRIM28-204ENST00000594806 TUBA1BP68363 451 aa22.44■■□□□ 1.18
TRIM28-204ENST00000594806 TUBA4AP68366 448 aa22.44■■□□□ 1.18
TRIM28-204ENST00000594806 ATP6AP1Q15904 470 aa22.44■■□□□ 1.18
TRIM28-204ENST00000594806 ZNF672Q499Z4 452 aaPredicted RBP22.44■■□□□ 1.18
TRIM28-204ENST00000594806 SHQ1Q6PI26 577 aaKnown RBP22.44■■□□□ 1.18
TRIM28-204ENST00000594806 FOXL2NBQ6ZUU3 175 aa22.44■■□□□ 1.18
TRIM28-204ENST00000594806 TUBA1AQ71U36 451 aa22.44■■□□□ 1.18
TRIM28-204ENST00000594806 TMEM179BQ7Z7N9 219 aa22.44■■□□□ 1.18
TRIM28-204ENST00000594806 MDP1Q86V88 176 aa22.44■■□□□ 1.18
TRIM28-204ENST00000594806 PIAS4Q8N2W9 510 aaPredicted RBP22.44■■□□□ 1.18
TRIM28-204ENST00000594806 DNAJC9Q8WXX5 260 aa22.44■■□□□ 1.18
TRIM28-204ENST00000594806 NSMAFQ92636 917 aa22.44■■□□□ 1.18
TRIM28-204ENST00000594806 EGLN3Q9H6Z9 239 aa22.44■■□□□ 1.18
TRIM28-204ENST00000594806 UBTD1Q9HAC8 227 aa22.44■■□□□ 1.18
TRIM28-204ENST00000594806 ZNF556Q9HAH1 456 aa22.44■■□□□ 1.18
TRIM28-204ENST00000594806 ZNF224Q9NZL3 707 aa22.44■■□□□ 1.18
TRIM28-204ENST00000594806 UGT2A1Q9Y4X1 527 aa22.44■■□□□ 1.18
TRIM28-204ENST00000594806 POLQO75417 2590 aa22.43■■□□□ 1.18
TRIM28-204ENST00000594806 IGKV1D-43A0A0B4J1Z2 117 aa22.43■■□□□ 1.18
TRIM28-204ENST00000594806 IGHV1-18A0A0C4DH31 117 aa22.43■■□□□ 1.18
TRIM28-204ENST00000594806 SHISA9B4DS77 424 aa22.43■■□□□ 1.18
TRIM28-204ENST00000594806 TMCC2O75069 709 aa22.43■■□□□ 1.18
TRIM28-204ENST00000594806 HLA-HP01893 362 aa22.43■■□□□ 1.18
TRIM28-204ENST00000594806 CRYAAP02489 173 aa22.43■■□□□ 1.18
TRIM28-204ENST00000594806 RAB1AP62820 205 aa22.43■■□□□ 1.18
TRIM28-204ENST00000594806 KEAP1Q14145 624 aa22.43■■□□□ 1.18
TRIM28-204ENST00000594806 FAM27BQ5VT28 67 aa22.43■■□□□ 1.18
TRIM28-204ENST00000594806 SLC22A25Q6T423 547 aa22.43■■□□□ 1.18
TRIM28-204ENST00000594806 SLC16A14Q7RTX9 510 aa22.43■■□□□ 1.18
TRIM28-204ENST00000594806 JAZF1Q86VZ6 243 aa22.43■■□□□ 1.18
TRIM28-204ENST00000594806 KBTBD8Q8NFY9 601 aa22.43■■□□□ 1.18
TRIM28-204ENST00000594806 NRGNQ92686 78 aa22.43■■□□□ 1.18
TRIM28-204ENST00000594806 FBXW5Q969U6 566 aa22.43■■□□□ 1.18
TRIM28-204ENST00000594806 WACQ9BTA9 647 aa22.43■■□□□ 1.18
TRIM28-204ENST00000594806 LIME1Q9H400 295 aa22.43■■□□□ 1.18
TRIM28-204ENST00000594806 NTN4Q9HB63 628 aa22.43■■□□□ 1.18
TRIM28-204ENST00000594806 PLCE1Q9P212 2302 aa22.43■■□□□ 1.18
TRIM28-204ENST00000594806 HRNRQ86YZ3 2850 aaPredicted RBP22.43■■□□□ 1.18
TRIM28-204ENST00000594806 RAB36O95755 333 aa22.42■■□□□ 1.18
TRIM28-204ENST00000594806 CRABP1P29762 137 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms