RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 B9D1Q9UPM9 204 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 B3GNT3Q9Y2A9 372 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 LIPGQ9Y5X9 500 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 ZNF407Q9C0G0 2248 aa11.98□□□□□ -0.49
VMP1-217ENST00000593168 DNAJC13O75165 2243 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 IGHV3-15A0A0B4J1V0 119 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 TMEM129A0AVI4 362 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 SLC35F4A4IF30 521 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 ZNF726A6NNF4 738 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 NPIPA2E9PIF3 369 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 NPIPA3F8WFD2 350 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 CYTIPO60759 359 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 SEC14L2O76054 403 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 APOL3O95236 402 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 IGHG1P01857 330 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 RAB39AQ14964 217 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 ABLIM2Q6H8Q1 611 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 DNM1P34Q6PK57 102 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 B3GLCTQ6Y288 498 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 ZNF367Q7RTV3 350 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 SIAH3Q8IW03 269 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 GHDCQ8N2G8 530 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 ACBD7Q8N6N7 88 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 OR51L1Q8NGJ5 315 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 OR13F1Q8NGS4 319 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 PNPLA2Q96AD5 504 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 ZMYND19Q96E35 227 aaPredicted RBP11.97□□□□□ -0.49
VMP1-217ENST00000593168 WDYHV1Q96HA8 205 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 TSSK2Q96PF2 358 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 TAAR6Q96RI8 345 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 ZNF649Q9BS31 505 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 MND1Q9BWT6 205 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 RACGAP1Q9H0H5 632 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 PLSCR2Q9NRY7 297 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 SPRR3Q9UBC9 169 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 KIAA1549Q9HCM3 1950 aa11.97□□□□□ -0.49
VMP1-217ENST00000593168 IGLV1-36A0A0B4J1U3 117 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 ZNF716A6NP11 495 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 DCTN6O00399 190 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 AQP7O14520 342 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 AKAP8O43823 692 aaKnown RBP11.96□□□□□ -0.49
VMP1-217ENST00000593168 SLC16A7O60669 478 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 INMTO95050 263 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 SYNGR4O95473 234 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 PTHP01270 115 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 OR2T7P0C7T2 308 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 LIMS3P0CW19 117 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 LIMS4P0CW20 117 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 PGA4P0DJD7 388 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 PGA3P0DJD8 388 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 PYCR1P32322 319 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 CLDN17P56750 224 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 ACTC1P68032 377 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 ACTA1P68133 377 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 SRYQ05066 204 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 PLEKHN1Q494U1 663 aaPredicted RBP11.96□□□□□ -0.49
VMP1-217ENST00000593168 THEM4Q5T1C6 240 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 FCRLAQ7L513 359 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 SHFQ7M4L6 423 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 ZIC4Q8N9L1 334 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 OR6K6Q8NGW6 343 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 OR2T27Q8NH04 317 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 ROBO4Q8WZ75 1007 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 INTS12Q96CB8 462 aaKnown RBP11.96□□□□□ -0.49
VMP1-217ENST00000593168 NMD3Q96D46 503 aaKnown RBP11.96□□□□□ -0.49
VMP1-217ENST00000593168 SNRNP40Q96DI7 357 aaKnown RBP11.96□□□□□ -0.49
VMP1-217ENST00000593168 ZNF845Q96IR2 970 aaPredicted RBP11.96□□□□□ -0.49
VMP1-217ENST00000593168 CNN2Q99439 309 aaKnown RBP11.96□□□□□ -0.49
VMP1-217ENST00000593168 EMC6Q9BV81 110 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 MARCH7Q9H992 704 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 ASF1BQ9NVP2 202 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 ERVK13-1Q9NX77 482 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 TAS2R16Q9NYV7 291 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 CLEC2DQ9UHP7 191 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 SLC5A6Q9Y289 635 aa11.96□□□□□ -0.49
VMP1-217ENST00000593168 IGKV3D-15A0A087WSY6 115 aa11.95□□□□□ -0.5
VMP1-217ENST00000593168 MYL12BO14950 172 aa11.95□□□□□ -0.5
VMP1-217ENST00000593168 KHDRBS3O75525 346 aaKnown RBP11.95□□□□□ -0.5
VMP1-217ENST00000593168 ZNF432O94892 652 aa11.95□□□□□ -0.5
VMP1-217ENST00000593168 CRYABP02511 175 aaKnown RBP11.95□□□□□ -0.5
VMP1-217ENST00000593168 LCKP06239 509 aa11.95□□□□□ -0.5
VMP1-217ENST00000593168 NR2C1P13056 603 aa11.95□□□□□ -0.5
VMP1-217ENST00000593168 CTLA4P16410 223 aa11.95□□□□□ -0.5
VMP1-217ENST00000593168 ETV1P50549 477 aa11.95□□□□□ -0.5
VMP1-217ENST00000593168 GP2P55259 537 aaKnown RBP11.95□□□□□ -0.5
VMP1-217ENST00000593168 DBPQ10586 325 aaPredicted RBP11.95□□□□□ -0.5
VMP1-217ENST00000593168 HIST3H3Q16695 136 aa11.95□□□□□ -0.5
VMP1-217ENST00000593168 CHMP1BQ7LBR1 199 aa11.95□□□□□ -0.5
VMP1-217ENST00000593168 SLC16A9Q7RTY1 509 aa11.95□□□□□ -0.5
VMP1-217ENST00000593168 WDFY1Q8IWB7 410 aa11.95□□□□□ -0.5
VMP1-217ENST00000593168 NOXO1Q8NFA2 376 aa11.95□□□□□ -0.5
VMP1-217ENST00000593168 SARAFQ96BY9 339 aa11.95□□□□□ -0.5
VMP1-217ENST00000593168 COG8Q96MW5 612 aa11.95□□□□□ -0.5
VMP1-217ENST00000593168 ZNF385AQ96PM9 386 aaKnown RBP11.95□□□□□ -0.5
VMP1-217ENST00000593168 RNF122Q9H9V4 155 aa11.95□□□□□ -0.5
VMP1-217ENST00000593168 MCTS1Q9ULC4 181 aaKnown RBP11.95□□□□□ -0.5
VMP1-217ENST00000593168 RCE1Q9Y256 329 aa11.95□□□□□ -0.5
VMP1-217ENST00000593168 LSM2Q9Y333 95 aaKnown RBP11.95□□□□□ -0.5
VMP1-217ENST00000593168 FLVCR1Q9Y5Y0 555 aa11.95□□□□□ -0.5
VMP1-217ENST00000593168 OTOGQ6ZRI0 2925 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms