RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 OR8G3PP0DMU2 310 aa13.62□□□□□ -0.23
LIG3-215ENST00000592690 ZNF14P17017 642 aaPredicted RBP13.62□□□□□ -0.23
LIG3-215ENST00000592690 RRM2P31350 389 aa13.62□□□□□ -0.23
LIG3-215ENST00000592690 APOBEC3AP31941 199 aaPredicted RBP13.62□□□□□ -0.23
LIG3-215ENST00000592690 RPL4P36578 427 aaKnown RBP13.62□□□□□ -0.23
LIG3-215ENST00000592690 ZNF84P51523 738 aa13.62□□□□□ -0.23
LIG3-215ENST00000592690 FXYD6P3P58550 94 aa13.62□□□□□ -0.23
LIG3-215ENST00000592690 RAB1AP62820 205 aa13.62□□□□□ -0.23
LIG3-215ENST00000592690 ERVK-25P63136 954 aa13.62□□□□□ -0.23
LIG3-215ENST00000592690 HGFACQ04756 655 aa13.62□□□□□ -0.23
LIG3-215ENST00000592690 DHFR2Q86XF0 187 aa13.62□□□□□ -0.23
LIG3-215ENST00000592690 NSMAFQ92636 917 aa13.62□□□□□ -0.23
LIG3-215ENST00000592690 CCDC124Q96CT7 223 aaKnown RBP13.62□□□□□ -0.23
LIG3-215ENST00000592690 RSRC1Q96IZ7 334 aaKnown RBP13.62□□□□□ -0.23
LIG3-215ENST00000592690 GPA33Q99795 319 aa13.62□□□□□ -0.23
LIG3-215ENST00000592690 ALG12Q9BV10 488 aa13.62□□□□□ -0.23
LIG3-215ENST00000592690 CACNG6Q9BXT2 260 aa13.62□□□□□ -0.23
LIG3-215ENST00000592690 MUC13Q9H3R2 512 aa13.62□□□□□ -0.23
LIG3-215ENST00000592690 CA10Q9NS85 328 aa13.62□□□□□ -0.23
LIG3-215ENST00000592690 AURKCQ9UQB9 309 aa13.62□□□□□ -0.23
LIG3-215ENST00000592690 SIGLEC7Q9Y286 467 aa13.62□□□□□ -0.23
LIG3-215ENST00000592690 UGT2A1Q9Y4X1 527 aa13.62□□□□□ -0.23
LIG3-215ENST00000592690 RTTNQ86VV8 2226 aa13.62□□□□□ -0.23
LIG3-215ENST00000592690 TRIM64A6NGJ6 449 aa13.61□□□□□ -0.23
LIG3-215ENST00000592690 TRIM64BA6NI03 449 aa13.61□□□□□ -0.23
LIG3-215ENST00000592690 H7C1C5 153 aa13.61□□□□□ -0.23
LIG3-215ENST00000592690 PTP4A3O75365 173 aa13.61□□□□□ -0.23
LIG3-215ENST00000592690 RAB36O95755 333 aa13.61□□□□□ -0.23
LIG3-215ENST00000592690 CD14P08571 375 aa13.61□□□□□ -0.23
LIG3-215ENST00000592690 CDAP32320 146 aa13.61□□□□□ -0.23
LIG3-215ENST00000592690 LCN6P62502 163 aa13.61□□□□□ -0.23
LIG3-215ENST00000592690 TRIM25Q14258 630 aaKnown RBP13.61□□□□□ -0.23
LIG3-215ENST00000592690 RAB39AQ14964 217 aa13.61□□□□□ -0.23
LIG3-215ENST00000592690 MTX3Q5HYI7 312 aa13.61□□□□□ -0.23
LIG3-215ENST00000592690 FAM205BPQ63HN1 556 aa13.61□□□□□ -0.23
LIG3-215ENST00000592690 SLC25A47Q6Q0C1 308 aa13.61□□□□□ -0.23
LIG3-215ENST00000592690 VHLLQ6RSH7 139 aa13.61□□□□□ -0.23
LIG3-215ENST00000592690 THSD4Q6ZMP0 1018 aa13.61□□□□□ -0.23
LIG3-215ENST00000592690 TRMT61AQ96FX7 289 aaKnown RBP13.61□□□□□ -0.23
LIG3-215ENST00000592690 Q96M85 177 aa13.61□□□□□ -0.23
LIG3-215ENST00000592690 C1orf21Q9H246 121 aa13.61□□□□□ -0.23
LIG3-215ENST00000592690 SMURF2Q9HAU4 748 aa13.61□□□□□ -0.23
LIG3-215ENST00000592690 IL20RAQ9UHF4 553 aa13.61□□□□□ -0.23
LIG3-215ENST00000592690 UNC119BA6NIH7 251 aa13.6□□□□□ -0.23
LIG3-215ENST00000592690 A6NIZ1 184 aa13.6□□□□□ -0.23
LIG3-215ENST00000592690 FARS2O95363 451 aaKnown RBP13.6□□□□□ -0.23
LIG3-215ENST00000592690 MAGEA2P43356 314 aa13.6□□□□□ -0.23
LIG3-215ENST00000592690 SMIM11AP58511 58 aa13.6□□□□□ -0.23
LIG3-215ENST00000592690 RAP1BP61224 184 aa13.6□□□□□ -0.23
LIG3-215ENST00000592690 RAP1AP62834 184 aa13.6□□□□□ -0.23
LIG3-215ENST00000592690 MST1LQ2TV78 715 aa13.6□□□□□ -0.23
LIG3-215ENST00000592690 MESTQ5EB52 335 aa13.6□□□□□ -0.23
LIG3-215ENST00000592690 FAM122BQ7Z309 247 aa13.6□□□□□ -0.23
LIG3-215ENST00000592690 ZER1Q7Z7L7 766 aa13.6□□□□□ -0.23
LIG3-215ENST00000592690 ZNF584Q8IVC4 421 aa13.6□□□□□ -0.23
LIG3-215ENST00000592690 CIARTQ8N365 385 aaPredicted RBP13.6□□□□□ -0.23
LIG3-215ENST00000592690 LRRC18Q8N456 261 aa13.6□□□□□ -0.23
LIG3-215ENST00000592690 ARIH2OSQ8N7S6 290 aa13.6□□□□□ -0.23
LIG3-215ENST00000592690 NUP37Q8NFH4 326 aa13.6□□□□□ -0.23
LIG3-215ENST00000592690 OR4F15Q8NGB8 312 aa13.6□□□□□ -0.23
LIG3-215ENST00000592690 NABP1Q96AH0 204 aa13.6□□□□□ -0.23
LIG3-215ENST00000592690 FBXO17Q96EF6 278 aa13.6□□□□□ -0.23
LIG3-215ENST00000592690 ZNF570Q96NI8 536 aa13.6□□□□□ -0.23
LIG3-215ENST00000592690 THTPAQ9BU02 230 aa13.6□□□□□ -0.23
LIG3-215ENST00000592690 DENND2DQ9H6A0 471 aaPredicted RBP13.6□□□□□ -0.23
LIG3-215ENST00000592690 KRCC1Q9NPI7 259 aaPredicted RBP13.6□□□□□ -0.23
LIG3-215ENST00000592690 TEX13CA0A0J9YWL9 993 aa13.59□□□□□ -0.23
LIG3-215ENST00000592690 H7C1Q1 480 aa13.59□□□□□ -0.23
LIG3-215ENST00000592690 OR10H3O60404 316 aa13.59□□□□□ -0.23
LIG3-215ENST00000592690 NDUFB2O95178 105 aa13.59□□□□□ -0.23
LIG3-215ENST00000592690 NR2C1P13056 603 aa13.59□□□□□ -0.23
LIG3-215ENST00000592690 ZNF35P13682 527 aa13.59□□□□□ -0.23
LIG3-215ENST00000592690 THBS4P35443 961 aa13.59□□□□□ -0.23
LIG3-215ENST00000592690 MRPS34P82930 218 aaKnown RBP13.59□□□□□ -0.23
LIG3-215ENST00000592690 SNTB2Q13425 540 aaKnown RBP13.59□□□□□ -0.23
LIG3-215ENST00000592690 ADIPOQQ15848 244 aa13.59□□□□□ -0.23
LIG3-215ENST00000592690 SWI5Q1ZZU3 235 aa13.59□□□□□ -0.23
LIG3-215ENST00000592690 NRN1LQ496H8 165 aa13.59□□□□□ -0.23
LIG3-215ENST00000592690 THEM4Q5T1C6 240 aa13.59□□□□□ -0.23
LIG3-215ENST00000592690 KRT80Q6KB66 452 aa13.59□□□□□ -0.23
LIG3-215ENST00000592690 SLC16A14Q7RTX9 510 aa13.59□□□□□ -0.23
LIG3-215ENST00000592690 IL17RDQ8NFM7 739 aa13.59□□□□□ -0.23
LIG3-215ENST00000592690 FANK1Q8TC84 345 aa13.59□□□□□ -0.23
LIG3-215ENST00000592690 RASD2Q96D21 266 aa13.59□□□□□ -0.23
LIG3-215ENST00000592690 ASB9Q96DX5 294 aa13.59□□□□□ -0.23
LIG3-215ENST00000592690 C18orf12Q96KH6 178 aa13.59□□□□□ -0.23
LIG3-215ENST00000592690 RBP7Q96R05 134 aa13.59□□□□□ -0.23
LIG3-215ENST00000592690 GPX7Q96SL4 187 aaPredicted RBP13.59□□□□□ -0.23
LIG3-215ENST00000592690 GSX1Q9H4S2 264 aaPredicted RBP13.59□□□□□ -0.23
LIG3-215ENST00000592690 GRHPRQ9UBQ7 328 aa13.59□□□□□ -0.23
LIG3-215ENST00000592690 H7C417 338 aa13.58□□□□□ -0.24
LIG3-215ENST00000592690 ENTPD5O75356 428 aa13.58□□□□□ -0.24
LIG3-215ENST00000592690 MMP7P09237 267 aaPredicted RBP13.58□□□□□ -0.24
LIG3-215ENST00000592690 OR4A8P0C604 315 aa13.58□□□□□ -0.24
LIG3-215ENST00000592690 FOSL1P15407 271 aa13.58□□□□□ -0.24
LIG3-215ENST00000592690 SERPINF1P36955 418 aa13.58□□□□□ -0.24
LIG3-215ENST00000592690 KRR1Q13601 381 aaKnown RBP13.58□□□□□ -0.24
LIG3-215ENST00000592690 DAG1Q14118 895 aa13.58□□□□□ -0.24
LIG3-215ENST00000592690 CLEC12BQ2HXU8 276 aa13.58□□□□□ -0.24
LIG3-215ENST00000592690 SLC36A2Q495M3 483 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms