RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 BTBD10Q9BSF8 475 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 LRMDAQ9H2I8 198 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 NELFAQ9H3P2 528 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 DENND2DQ9H6A0 471 aaPredicted RBP8.77□□□□□ -1.01
BRCA1-227ENST00000591849 CBLN4Q9NTU7 201 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 TMEM38BQ9NVV0 291 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 PMF1-BGLAPU3KQ54 211 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 ACANP16112 2415 aa8.77□□□□□ -1.01
BRCA1-227ENST00000591849 MAP1AP78559 2803 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-227ENST00000591849 IQCMA0A1B0GVH7 501 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 A0A1W2PPL8 197 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 CDC42EP2O14613 210 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 MGRN1O60291 552 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 DNAJC8O75937 253 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-227ENST00000591849 CCNB2O95067 398 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 SLC2A10O95528 541 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 IGHMP01871 453 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 SEMG1P04279 462 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 TSPAN19P0C672 248 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 DANCRP0C864 163 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 PATE4P0C8F1 98 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 NPR2P20594 1047 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 NOS3P29474 1203 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 OMPP47874 163 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 CENPAP49450 140 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 ADAM8P78325 824 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 DAG1Q14118 895 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 RAB39AQ14964 217 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 RAB35Q15286 201 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 PGGHGQ32M88 737 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 SMARCD3Q6STE5 483 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 ZNF627Q7L945 461 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 SPATA24Q86W54 205 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 LRRC18Q8N456 261 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 LINC00471Q8N535 108 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 LRRC75AQ8NAA5 344 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 FBXO17Q96EF6 278 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 DHRS1Q96LJ7 313 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 Q96M85 177 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 TSPAN32Q96QS1 320 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 TRAF4Q9BUZ4 470 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-227ENST00000591849 CACNG6Q9BXT2 260 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 MRPL13Q9BYD1 178 aaKnown RBP8.76□□□□□ -1.01
BRCA1-227ENST00000591849 GSX2Q9BZM3 304 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 RERGLQ9H628 205 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 MAGIXQ9H6Y5 334 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 REEP1Q9H902 201 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 SIAEQ9HAT2 523 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 CDH20Q9HBT6 801 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 BARX1Q9HBU1 254 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-227ENST00000591849 CRNNQ9UBG3 495 aaPredicted RBP8.76□□□□□ -1.01
BRCA1-227ENST00000591849 SIGLEC7Q9Y286 467 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 IER3IP1Q9Y5U9 82 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 PRR14LQ5THK1 2151 aa8.76□□□□□ -1.01
BRCA1-227ENST00000591849 FLNAP21333 2647 aaKnown RBP8.76□□□□□ -1.01
BRCA1-227ENST00000591849 TCRBV5S2A0A599 114 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 H7C1C5 153 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 SOCS2O14508 198 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 PTP4A3O75365 173 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 ATP5HO75947 161 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 IGKV3-15P01624 115 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 IGLV1-44P01699 117 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 CELA3BP08861 270 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 RAP2AP10114 183 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 SLC6A6P31641 620 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 CDAP32320 146 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 APLNRP35414 380 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 SERPINF1P36955 418 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 SNRPD2P62316 118 aaKnown RBP8.75□□□□□ -1.01
BRCA1-227ENST00000591849 LCN6P62502 163 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 FMODQ06828 376 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 KRR1Q13601 381 aaKnown RBP8.75□□□□□ -1.01
BRCA1-227ENST00000591849 HIST3H3Q16695 136 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 IQCCQ4KMZ1 466 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 KRT80Q6KB66 452 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 SLC25A47Q6Q0C1 308 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 PRSS57Q6UWY2 283 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 B3GLCTQ6Y288 498 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 DPY19L2P2Q6ZN68 376 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 ZER1Q7Z7L7 766 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 JAZF1Q86VZ6 243 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 WFDC11Q8NEX6 87 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 OR52L1Q8NGH7 329 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 OR1J2Q8NGS2 313 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 FANK1Q8TC84 345 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 HTRA1Q92743 480 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 MS4A3Q96HJ5 214 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 Q96MF0 132 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 ERMAPQ96PL5 475 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-227ENST00000591849 KCNK17Q96T54 332 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 BDH2Q9BUT1 245 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 IFT27Q9BW83 186 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 YY1AP1Q9H869 796 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 SMURF2Q9HAU4 748 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 ZNF701Q9NV72 531 aaPredicted RBP8.75□□□□□ -1.01
BRCA1-227ENST00000591849 B3GNT2Q9NY97 397 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 IL20RAQ9UHF4 553 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 ADAM18Q9Y3Q7 739 aa8.75□□□□□ -1.01
BRCA1-227ENST00000591849 SAMHD1Q9Y3Z3 626 aaKnown RBP8.75□□□□□ -1.01
BRCA1-227ENST00000591849 NIPBLQ6KC79 2804 aaeCLIP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms