RNA–Protein interactions for RNA: ENST00000590485.1

SAFB-208, Transcript of scaffold attachment factor B, humanhuman

TSL 3

Gene SAFB, Length 548 nt, Biotype retained intron, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB-208ENST00000590485 NLE1Q9NVX2 485 aaPredicted RBP3.5□□□□□ -1.85
SAFB-208ENST00000590485 CIDEBQ9UHD4 219 aa3.5□□□□□ -1.85
SAFB-208ENST00000590485 ZNF346Q9UL40 294 aaKnown RBP3.5□□□□□ -1.85
SAFB-208ENST00000590485 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.5□□□□□ -1.85
SAFB-208ENST00000590485 SPATA2Q9UM82 520 aa3.5□□□□□ -1.85
SAFB-208ENST00000590485 DIMT1Q9UNQ2 313 aaKnown RBP3.5□□□□□ -1.85
SAFB-208ENST00000590485 KLF13Q9Y2Y9 288 aaPredicted RBP3.5□□□□□ -1.85
SAFB-208ENST00000590485 ALG6Q9Y672 507 aa3.5□□□□□ -1.85
SAFB-208ENST00000590485 INTS1Q8N201 2190 aaKnown RBP3.5□□□□□ -1.85
SAFB-208ENST00000590485 ACANP16112 2415 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 IGHV3-16A0A0C4DH30 117 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 TRIM64A6NGJ6 449 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 TRIM64BA6NI03 449 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 HACD1B0YJ81 288 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 KLRC4-KLRK1H3BQV0 150 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 CHEK1O14757 476 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 NDC80O14777 642 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 CST8O60676 142 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 GALR3O60755 368 aaPredicted RBP3.49□□□□□ -1.85
SAFB-208ENST00000590485 SH3BGRLO75368 114 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 VPS26AO75436 327 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 MT-ND1P03886 318 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 H2AFZP0C0S5 128 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 PSMB5P28074 263 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 CMPK1P30085 196 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 CDKN2BP42772 138 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 EFNA3P52797 238 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 LMO4P61968 165 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 FAM53BQ14153 422 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 NDUFA9Q16795 377 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 TMEM44Q2T9K0 475 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 HKDC1Q2TB90 917 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 SLC25A35Q3KQZ1 300 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 CMPK2Q5EBM0 449 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 TCTEX1D4Q5JR98 221 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 REP15Q6BDI9 236 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 SASS6Q6UVJ0 657 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 MFSD7Q6UXD7 560 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 PAMR1Q6UXH9 720 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 LANCL3Q6ZV70 420 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 H2AFVQ71UI9 128 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 ANKRD37Q7Z713 158 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 RPS19BP1Q86WX3 136 aaKnown RBP3.49□□□□□ -1.85
SAFB-208ENST00000590485 PEX5LQ8IYB4 626 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 PIANPQ8IYJ0 282 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 RPRMLQ8N4K4 120 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 FBXO25Q8TCJ0 367 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 ASZ1Q8WWH4 475 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 CTNNBL1Q8WYA6 563 aaPredicted RBP3.49□□□□□ -1.85
SAFB-208ENST00000590485 P3H4Q92791 437 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 RERGQ96A58 199 aaPredicted RBP3.49□□□□□ -1.85
SAFB-208ENST00000590485 LRRC45Q96CN5 670 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 RAB39BQ96DA2 213 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 MRPL53Q96EL3 112 aaKnown RBP3.49□□□□□ -1.85
SAFB-208ENST00000590485 RBM18Q96H35 190 aaKnown RBP3.49□□□□□ -1.85
SAFB-208ENST00000590485 DNAJC1Q96KC8 554 aaKnown RBP3.49□□□□□ -1.85
SAFB-208ENST00000590485 ALS2CR12Q96Q35 445 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 DPH7Q9BTV6 452 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 CARD6Q9BX69 1037 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 TSSK1BQ9BXA7 367 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 HSD3B7Q9H2F3 369 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 NT5DC2Q9H857 520 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 TRIM45Q9H8W5 580 aaPredicted RBP3.49□□□□□ -1.85
SAFB-208ENST00000590485 ANO10Q9NW15 660 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 UTP6Q9NYH9 597 aaKnown RBP3.49□□□□□ -1.85
SAFB-208ENST00000590485 TRMT6Q9UJA5 497 aaKnown RBP3.49□□□□□ -1.85
SAFB-208ENST00000590485 FBXO7Q9Y3I1 522 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 RTTNQ86VV8 2226 aa3.49□□□□□ -1.85
SAFB-208ENST00000590485 PHF3Q92576 2039 aaKnown RBP3.49□□□□□ -1.85
SAFB-208ENST00000590485 TRBV2A0A0J9YWF9 115 aa3.48□□□□□ -1.85
SAFB-208ENST00000590485 TEX48A0A1B0GUV7 120 aa3.48□□□□□ -1.85
SAFB-208ENST00000590485 A0A1W2PPV9 198 aa3.48□□□□□ -1.85
SAFB-208ENST00000590485 SH3PXD2BA1X283 911 aa3.48□□□□□ -1.85
SAFB-208ENST00000590485 RNF212BA8MTL3 300 aa3.48□□□□□ -1.85
SAFB-208ENST00000590485 NPIPA2E9PIF3 369 aa3.48□□□□□ -1.85
SAFB-208ENST00000590485 H7C0C1 242 aa3.48□□□□□ -1.85
SAFB-208ENST00000590485 BCKDKO14874 412 aa3.48□□□□□ -1.85
SAFB-208ENST00000590485 C1orf105O95561 183 aa3.48□□□□□ -1.85
SAFB-208ENST00000590485 ABHD2P08910 425 aa3.48□□□□□ -1.85
SAFB-208ENST00000590485 MSNP26038 577 aaKnown RBP3.48□□□□□ -1.85
SAFB-208ENST00000590485 PPP2R1BP30154 601 aa3.48□□□□□ -1.85
SAFB-208ENST00000590485 CCR7P32248 378 aa3.48□□□□□ -1.85
SAFB-208ENST00000590485 FOXN2P32314 431 aa3.48□□□□□ -1.85
SAFB-208ENST00000590485 RFC3P40938 356 aa3.48□□□□□ -1.85
SAFB-208ENST00000590485 XCR1P46094 333 aa3.48□□□□□ -1.85
SAFB-208ENST00000590485 ATP5OP48047 213 aa3.48□□□□□ -1.85
SAFB-208ENST00000590485 HLCSP50747 726 aa3.48□□□□□ -1.85
SAFB-208ENST00000590485 MLF1P58340 268 aa3.48□□□□□ -1.85
SAFB-208ENST00000590485 SLC26A5P58743 744 aa3.48□□□□□ -1.85
SAFB-208ENST00000590485 CCZ1BP86790 482 aa3.48□□□□□ -1.85
SAFB-208ENST00000590485 CCZ1P86791 482 aaPredicted RBP3.48□□□□□ -1.85
SAFB-208ENST00000590485 RELAQ04206 551 aa3.48□□□□□ -1.85
SAFB-208ENST00000590485 PRDX1Q06830 199 aaKnown RBP3.48□□□□□ -1.85
SAFB-208ENST00000590485 CBX3Q13185 183 aa3.48□□□□□ -1.85
SAFB-208ENST00000590485 EXOSC7Q15024 291 aaKnown RBP3.48□□□□□ -1.85
SAFB-208ENST00000590485 NSDHLQ15738 373 aa3.48□□□□□ -1.85
SAFB-208ENST00000590485 CCSMST1Q4G0I0 132 aa3.48□□□□□ -1.85
SAFB-208ENST00000590485 GPAT3Q53EU6 434 aa3.48□□□□□ -1.85
SAFB-208ENST00000590485 SFT2D3Q587I9 215 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms