RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 TMEM104Q8NE00 496 aa13.82□□□□□ -0.2
CIRBP-228ENST00000590347 OR4C6Q8NH72 309 aa13.82□□□□□ -0.2
CIRBP-228ENST00000590347 ZPLD1Q8TCW7 415 aa13.82□□□□□ -0.2
CIRBP-228ENST00000590347 IGSF21Q96ID5 467 aa13.82□□□□□ -0.2
CIRBP-228ENST00000590347 TOX2Q96NM4 488 aa13.82□□□□□ -0.2
CIRBP-228ENST00000590347 TNFRSF13CQ96RJ3 184 aa13.82□□□□□ -0.2
CIRBP-228ENST00000590347 ALX4Q9H161 411 aaPredicted RBP13.82□□□□□ -0.2
CIRBP-228ENST00000590347 LANCL2Q9NS86 450 aa13.82□□□□□ -0.2
CIRBP-228ENST00000590347 TAC3Q9UHF0 121 aa13.82□□□□□ -0.2
CIRBP-228ENST00000590347 C9orf170A2RU37 121 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 ZNF727A8MUV8 499 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 PHOX2AO14813 284 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 FGF16O43320 207 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 CSF2RAP15509 400 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 TAS2R43P59537 309 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 SPCS3P61009 180 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 ARHGAP40Q5TG30 622 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 NKAIN2Q5VXU1 208 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 NXPE4Q6UWF7 544 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 TPRG1Q6ZUI0 275 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 OVCH1Q7RTY7 1134 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 OR4K17Q8NGC6 315 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 RNASE11Q8TAA1 199 aaKnown RBP13.81□□□□□ -0.2
CIRBP-228ENST00000590347 SUN3Q8TAQ9 357 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 TSSK2Q96PF2 358 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 OCSTAMPQ9BR26 566 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 NEUROD4Q9HD90 331 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 KNL1Q8NG31 2342 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 H7C4K7 107 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 ITGA10O75578 1167 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 PAPLNO95428 1278 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 HOXC4P09017 264 aaPredicted RBP13.81□□□□□ -0.2
CIRBP-228ENST00000590347 FAM157CP0CG43 387 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 SFTPCP11686 197 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 CD79AP11912 226 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 HMGA1P17096 107 aaKnown RBP13.81□□□□□ -0.2
CIRBP-228ENST00000590347 SERPINA4P29622 427 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 AP1S1P61966 158 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 ZNF343Q6P1L6 599 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 GABRG1Q8N1C3 465 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 MIB2Q96AX9 1013 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 KIRREL1Q96J84 757 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 UTP23Q9BRU9 249 aaKnown RBP13.81□□□□□ -0.2
CIRBP-228ENST00000590347 CST11Q9H112 138 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 ATG5Q9H1Y0 275 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 TMED7Q9Y3B3 224 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 CEP290O15078 2479 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 METTL12A8MUP2 240 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 NRG2O14511 850 aaPredicted RBP13.81□□□□□ -0.2
CIRBP-228ENST00000590347 ATXN7O15265 892 aaPredicted RBP13.81□□□□□ -0.2
CIRBP-228ENST00000590347 FOLR2P14207 255 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 FABP4P15090 132 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 GLP1RP43220 463 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 SPINT3P49223 89 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 ZNF84P51523 738 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 PCBP4P57723 403 aaKnown RBP13.81□□□□□ -0.2
CIRBP-228ENST00000590347 STARD6P59095 220 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 MOAP1Q96BY2 351 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 CYYR1Q96J86 154 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 RGCCQ9H4X1 137 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 CACFD1Q9UGQ2 172 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 MYOFQ9NZM1 2061 aa13.81□□□□□ -0.2
CIRBP-228ENST00000590347 TRAPPC13A5PLN9 417 aa13.8□□□□□ -0.2
CIRBP-228ENST00000590347 OR13C7P0DN81 318 aa13.8□□□□□ -0.2
CIRBP-228ENST00000590347 SQSTM1Q13501 440 aa13.8□□□□□ -0.2
CIRBP-228ENST00000590347 REC114Q7Z4M0 266 aa13.8□□□□□ -0.2
CIRBP-228ENST00000590347 TRAPPC5Q8IUR0 188 aa13.8□□□□□ -0.2
CIRBP-228ENST00000590347 ZSCAN4Q8NAM6 433 aaPredicted RBP13.8□□□□□ -0.2
CIRBP-228ENST00000590347 ZNF511Q8NB15 262 aa13.8□□□□□ -0.2
CIRBP-228ENST00000590347 ZNF587Q96SQ5 575 aaPredicted RBP13.8□□□□□ -0.2
CIRBP-228ENST00000590347 GAR1Q9NY12 217 aaKnown RBP13.8□□□□□ -0.2
CIRBP-228ENST00000590347 CLDND1Q9NY35 253 aa13.8□□□□□ -0.2
CIRBP-228ENST00000590347 DOK5Q9P104 306 aa13.8□□□□□ -0.2
CIRBP-228ENST00000590347 YIPF1Q9Y548 306 aa13.8□□□□□ -0.2
CIRBP-228ENST00000590347 TRBV23OR9-2A0A075B6M9 112 aa13.8□□□□□ -0.2
CIRBP-228ENST00000590347 HEXBP07686 556 aa13.8□□□□□ -0.2
CIRBP-228ENST00000590347 PI3P19957 117 aa13.8□□□□□ -0.2
CIRBP-228ENST00000590347 AK4P27144 223 aaPredicted RBP13.8□□□□□ -0.2
CIRBP-228ENST00000590347 LSSP48449 732 aa13.8□□□□□ -0.2
CIRBP-228ENST00000590347 NFATC4Q14934 902 aa13.8□□□□□ -0.2
CIRBP-228ENST00000590347 KHDRBS2Q5VWX1 349 aaKnown RBP13.8□□□□□ -0.2
CIRBP-228ENST00000590347 ZNF529Q6P280 563 aa13.8□□□□□ -0.2
CIRBP-228ENST00000590347 HIST2H3AQ71DI3 136 aa13.8□□□□□ -0.2
CIRBP-228ENST00000590347 GAREM2Q75VX8 874 aa13.8□□□□□ -0.2
CIRBP-228ENST00000590347 FOXRED1Q96CU9 486 aaPredicted RBP13.8□□□□□ -0.2
CIRBP-228ENST00000590347 OR7D2Q96RA2 312 aa13.8□□□□□ -0.2
CIRBP-228ENST00000590347 SLC6A7Q99884 636 aa13.8□□□□□ -0.2
CIRBP-228ENST00000590347 CWH43Q9H720 699 aa13.8□□□□□ -0.2
CIRBP-228ENST00000590347 FAM212BQ9NTI7 297 aaPredicted RBP13.8□□□□□ -0.2
CIRBP-228ENST00000590347 NME2P1O60361 137 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 CD70P32970 193 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 PRSS3P35030 304 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 MNDAP41218 407 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 RPL13AP3Q6NVV1 102 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 SLC16A11Q8NCK7 471 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 OR9A2Q8NGT5 310 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 ZNF461Q8TAF7 563 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 NUDCD2Q8WVJ2 157 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 FOXN4Q96NZ1 517 aa13.79□□□□□ -0.2
CIRBP-228ENST00000590347 EFCAB11Q9BUY7 163 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms