RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 NSMAFQ92636 917 aa18.61■□□□□ 0.57
ATG4D-212ENST00000590096 BDH2Q9BUT1 245 aa18.61■□□□□ 0.57
ATG4D-212ENST00000590096 EGLN3Q9H6Z9 239 aa18.61■□□□□ 0.57
ATG4D-212ENST00000590096 ZNF556Q9HAH1 456 aa18.61■□□□□ 0.57
ATG4D-212ENST00000590096 A0A1W2PPR1 153 aa18.6■□□□□ 0.57
ATG4D-212ENST00000590096 PRSS37A4D1T9 235 aa18.6■□□□□ 0.57
ATG4D-212ENST00000590096 IMPA2O14732 288 aa18.6■□□□□ 0.57
ATG4D-212ENST00000590096 ARPC3O15145 178 aa18.6■□□□□ 0.57
ATG4D-212ENST00000590096 TXNDC12O95881 172 aa18.6■□□□□ 0.57
ATG4D-212ENST00000590096 OR8G3PP0DMU2 310 aa18.6■□□□□ 0.57
ATG4D-212ENST00000590096 COX10Q12887 443 aa18.6■□□□□ 0.57
ATG4D-212ENST00000590096 NRN1LQ496H8 165 aa18.6■□□□□ 0.57
ATG4D-212ENST00000590096 CLEC12AQ5QGZ9 265 aa18.6■□□□□ 0.57
ATG4D-212ENST00000590096 SHQ1Q6PI26 577 aaKnown RBP18.6■□□□□ 0.57
ATG4D-212ENST00000590096 SLC25A47Q6Q0C1 308 aa18.6■□□□□ 0.57
ATG4D-212ENST00000590096 ZNF704Q6ZNC4 412 aaPredicted RBP18.6■□□□□ 0.57
ATG4D-212ENST00000590096 JAZF1Q86VZ6 243 aa18.6■□□□□ 0.57
ATG4D-212ENST00000590096 C10orf67Q8IYJ2 551 aa18.6■□□□□ 0.57
ATG4D-212ENST00000590096 SLC22A24Q8N4F4 322 aa18.6■□□□□ 0.57
ATG4D-212ENST00000590096 NMD3Q96D46 503 aaKnown RBP18.6■□□□□ 0.57
ATG4D-212ENST00000590096 NIPSNAP1Q9BPW8 284 aa18.6■□□□□ 0.57
ATG4D-212ENST00000590096 PLEKHF2Q9H8W4 249 aa18.6■□□□□ 0.57
ATG4D-212ENST00000590096 TBC1D23Q9NUY8 699 aa18.6■□□□□ 0.57
ATG4D-212ENST00000590096 IL20Q9NYY1 176 aa18.6■□□□□ 0.57
ATG4D-212ENST00000590096 EDARQ9UNE0 448 aa18.6■□□□□ 0.57
ATG4D-212ENST00000590096 SLC22A23A1A5C7 686 aa18.59■□□□□ 0.57
ATG4D-212ENST00000590096 ABCD4O14678 606 aa18.59■□□□□ 0.57
ATG4D-212ENST00000590096 IDH3BO43837 385 aa18.59■□□□□ 0.57
ATG4D-212ENST00000590096 CD79AP11912 226 aa18.59■□□□□ 0.57
ATG4D-212ENST00000590096 ANXA8P13928 327 aa18.59■□□□□ 0.57
ATG4D-212ENST00000590096 CD40P25942 277 aa18.59■□□□□ 0.57
ATG4D-212ENST00000590096 GUCA1AP43080 201 aaPredicted RBP18.59■□□□□ 0.57
ATG4D-212ENST00000590096 CD300LDQ6UXZ3 194 aa18.59■□□□□ 0.57
ATG4D-212ENST00000590096 HS3ST5Q8IZT8 346 aa18.59■□□□□ 0.57
ATG4D-212ENST00000590096 OR5K1Q8NHB7 308 aa18.59■□□□□ 0.57
ATG4D-212ENST00000590096 NRBF2Q96F24 287 aa18.59■□□□□ 0.57
ATG4D-212ENST00000590096 SLC38A2Q96QD8 506 aa18.59■□□□□ 0.57
ATG4D-212ENST00000590096 TMEM204Q9BSN7 226 aa18.59■□□□□ 0.57
ATG4D-212ENST00000590096 DENND2DQ9H6A0 471 aaPredicted RBP18.59■□□□□ 0.57
ATG4D-212ENST00000590096 UBTD1Q9HAC8 227 aa18.59■□□□□ 0.57
ATG4D-212ENST00000590096 NTN4Q9HB63 628 aa18.59■□□□□ 0.57
ATG4D-212ENST00000590096 TEP1Q99973 2627 aaKnown RBP18.59■□□□□ 0.57
ATG4D-212ENST00000590096 HRNRQ86YZ3 2850 aaPredicted RBP18.59■□□□□ 0.57
ATG4D-212ENST00000590096 IGKV1D-43A0A0B4J1Z2 117 aa18.58■□□□□ 0.56
ATG4D-212ENST00000590096 UBL3O95164 117 aa18.58■□□□□ 0.56
ATG4D-212ENST00000590096 SOX14O95416 240 aa18.58■□□□□ 0.56
ATG4D-212ENST00000590096 PLAUP00749 431 aa18.58■□□□□ 0.56
ATG4D-212ENST00000590096 HLA-HP01893 362 aa18.58■□□□□ 0.56
ATG4D-212ENST00000590096 NPR2P20594 1047 aa18.58■□□□□ 0.56
ATG4D-212ENST00000590096 ARR3P36575 388 aa18.58■□□□□ 0.56
ATG4D-212ENST00000590096 GSG1Q2KHT4 349 aa18.58■□□□□ 0.56
ATG4D-212ENST00000590096 MDP1Q86V88 176 aa18.58■□□□□ 0.56
ATG4D-212ENST00000590096 DEPDC4Q8N2C3 294 aa18.58■□□□□ 0.56
ATG4D-212ENST00000590096 PIAS4Q8N2W9 510 aaPredicted RBP18.58■□□□□ 0.56
ATG4D-212ENST00000590096 FAM169BQ8N8A8 192 aa18.58■□□□□ 0.56
ATG4D-212ENST00000590096 ATG16L2Q8NAA4 619 aa18.58■□□□□ 0.56
ATG4D-212ENST00000590096 PYDC1Q8WXC3 89 aa18.58■□□□□ 0.56
ATG4D-212ENST00000590096 LRTOMTQ8WZ04 291 aa18.58■□□□□ 0.56
ATG4D-212ENST00000590096 RADILQ96JH8 1075 aa18.58■□□□□ 0.56
ATG4D-212ENST00000590096 TSSK6Q9BXA6 273 aa18.58■□□□□ 0.56
ATG4D-212ENST00000590096 PLA2G12AQ9BZM1 189 aa18.58■□□□□ 0.56
ATG4D-212ENST00000590096 VSX1Q9NZR4 365 aaPredicted RBP18.58■□□□□ 0.56
ATG4D-212ENST00000590096 KIF17Q9P2E2 1029 aa18.58■□□□□ 0.56
ATG4D-212ENST00000590096 H3BN98 237 aa18.57■□□□□ 0.56
ATG4D-212ENST00000590096 MGRN1O60291 552 aa18.57■□□□□ 0.56
ATG4D-212ENST00000590096 RAB36O95755 333 aa18.57■□□□□ 0.56
ATG4D-212ENST00000590096 RENP00797 406 aa18.57■□□□□ 0.56
ATG4D-212ENST00000590096 CBR1P16152 277 aa18.57■□□□□ 0.56
ATG4D-212ENST00000590096 PRKACGP22612 351 aa18.57■□□□□ 0.56
ATG4D-212ENST00000590096 MRPS34P82930 218 aaKnown RBP18.57■□□□□ 0.56
ATG4D-212ENST00000590096 NPRL3Q12980 569 aa18.57■□□□□ 0.56
ATG4D-212ENST00000590096 C3orf36Q3SXR2 165 aa18.57■□□□□ 0.56
ATG4D-212ENST00000590096 ADAM5Q6NVV9 412 aa18.57■□□□□ 0.56
ATG4D-212ENST00000590096 ZFP1Q6P2D0 407 aa18.57■□□□□ 0.56
ATG4D-212ENST00000590096 SLC22A25Q6T423 547 aa18.57■□□□□ 0.56
ATG4D-212ENST00000590096 PTCHD4Q6ZW05 846 aa18.57■□□□□ 0.56
ATG4D-212ENST00000590096 SLC16A14Q7RTX9 510 aa18.57■□□□□ 0.56
ATG4D-212ENST00000590096 CDH24Q86UP0 819 aa18.57■□□□□ 0.56
ATG4D-212ENST00000590096 SKA3Q8IX90 412 aa18.57■□□□□ 0.56
ATG4D-212ENST00000590096 OR4K13Q8NH42 304 aa18.57■□□□□ 0.56
ATG4D-212ENST00000590096 TEX47Q8TBZ9 253 aa18.57■□□□□ 0.56
ATG4D-212ENST00000590096 NRGNQ92686 78 aa18.57■□□□□ 0.56
ATG4D-212ENST00000590096 SH3GL3Q99963 347 aa18.57■□□□□ 0.56
ATG4D-212ENST00000590096 KCNS3Q9BQ31 491 aa18.57■□□□□ 0.56
ATG4D-212ENST00000590096 SYT4Q9H2B2 425 aa18.57■□□□□ 0.56
ATG4D-212ENST00000590096 KCNN2Q9H2S1 579 aa18.57■□□□□ 0.56
ATG4D-212ENST00000590096 SEC61A2Q9H9S3 476 aa18.57■□□□□ 0.56
ATG4D-212ENST00000590096 SIAEQ9HAT2 523 aa18.57■□□□□ 0.56
ATG4D-212ENST00000590096 CRNNQ9UBG3 495 aaPredicted RBP18.57■□□□□ 0.56
ATG4D-212ENST00000590096 BAIAP2Q9UQB8 552 aa18.57■□□□□ 0.56
ATG4D-212ENST00000590096 UGT2A1Q9Y4X1 527 aa18.57■□□□□ 0.56
ATG4D-212ENST00000590096 CSMD1Q96PZ7 3565 aa18.57■□□□□ 0.56
ATG4D-212ENST00000590096 TACC2O95359 2948 aa18.56■□□□□ 0.56
ATG4D-212ENST00000590096 CADP27708 2225 aa18.56■□□□□ 0.56
ATG4D-212ENST00000590096 IGHV1-18A0A0C4DH31 117 aa18.56■□□□□ 0.56
ATG4D-212ENST00000590096 A0A1W2PPL8 197 aa18.56■□□□□ 0.56
ATG4D-212ENST00000590096 ZNF503-AS2A6NEH8 195 aa18.56■□□□□ 0.56
ATG4D-212ENST00000590096 BHLHE40O14503 412 aa18.56■□□□□ 0.56
ATG4D-212ENST00000590096 IGKV3-15P01624 115 aa18.56■□□□□ 0.56
ATG4D-212ENST00000590096 HIST1H1CP16403 213 aaKnown RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms